BAC Information

Click to search

BAC

Clone NameB6Ng01-151B01
Chromosome12 (Build37)
Map Location 98,265,063 - 98,266,160
singlet/doubletsinglet
Overlap genenone
Upstream gene1700019M22Rik, LOC100039664, EG628277
Downstream geneLOC382626, LOC100039743, LOC667732, LOC628351, LOC100039770
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151B01.bB6Ng01-151B01.g
ACCDH946982DH946983
length1,2161,086
definitionDH946982|Mus musculus domesticus DNA, BAC clone: B6Ng01-151B01, 5' end.DH946983|Mus musculus domesticus DNA, BAC clone: B6Ng01-151B01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggtccatgcagaaacatagtaagagaaatatacagtaaacca
gtagccaacatcgaactaaatggagagaatcttgaagcaatcccactaaa
atcagggactagacaaggctgaccactctctccctaccttttcaaagagc
tcaaagtcctagccagagaaattttacgacaaaaggaggtcaaatggata
caaattggaaagtaagaaaccaacctatcactatttgcagatgatatgat
agtatacttaaatgacaacaaaaacttcaccagagaactcctacacctga
taaacaactttagcaaagtggcaggatataaaattaactcaaacagatca
gtagccttcctctactcaagggataaacaaactgagaaagaaattaggga
aatgataccttttacaatagtcccaaacacgataaatatcttggtaggac
tctaaccaaacaagtgaaagatctgtatgacaagaacttcaagtctctga
agaaagaaatcgaagaagacctcagaagatggaaagatctcccatgctca
tggattgacaggaataatatagtaaaaagaccatcttgttgaaagcaata
tacagtttcaatgcaatccccatcaaaaatccaactcaattcttcataga
gttagaaatagcaactgtcaaattcatctagtataacaaaaaaaaccagg
atagcaaaaactattctcaacaataaaagaacttctgagcaaatcagcat
cccaggcctcaagctgtactacagagcaatagtgattaaaactgcatggt
attggtacagtgacaggcatgtagatcaatgaaatagaattgaagaccct
gaaatgaacccacacctctatggtcacttgattttttgaaaaggagttaa
aacccgttcaatggaaaaaagacagcattttcaacaaatgatgctggcac
aacttgcggttaccatgcagaataatgcaatttgatccattctaactctt
gtacaaagctcagtacaagtggatcaggacctcacataaggagatacact
gaaactatagtaagaaagtgggagactcgacacaggaaatttctgaacga
aacatgctatgctctaaaatcagattgaaatggaacctcataaattcaag
gctctcgatggcaggcaacggtccataaggacaaaaggccacctctctga
aatgtgtgaaaggaga
gaattctttccctgaaggggattacaacaatttttagagtacataacatc
ttcagctgtcaactggacacatgcgtggattaacctgaaaagagggaacc
acaactgaaaaatttcttagatcacactggcctgtgaccatattgtgagg
tatttttttttttaatttttaactggtgtaggagttttcagacactttga
ggggtgccattgctgggcagtgggcctgagatgtttaagaaaggtgtctg
agcaagccagaggaagcatgctagtaagtagtgtccctctggtctctgcc
tttcctcttgtctccatgtttctgattgaatttctgttctcatttctttg
atgatggataataacctgtaaattggaacttcttccctcttaaggttagg
ctacacagaattatataacccaaatctctcaaaacaaacaaaacaaaaca
aaaccaaaaactaaaaaccaaccaaccaaacaaacaaacagaaaaaaaac
cttcaacaaaatctttggagttatttttgcctcattatgttatgtttgga
ctttaaaaatatcttatttatctcttttttaccctatacatgtaagaccc
cctttcagggaccccccactctagtctcgggagtgagagagcaccctaag
aaacacgataatccattgctgtaatcacatgaggcagtttaatgaaggag
ctccagatctacatgtatcccacacaggagataatggatgtcggccacga
ggctcgaaagctagggatttttatggggtaaggggcttagaggtgtggaa
ttcagcatagcgacacacttttggcttattcaaacattagcagaaaaatt
acatgtacgtgcagggtgtcagagttctgtgagttgtgctcagtcagata
gccctgttatgtcctcacatttcctctttatctttaagtaagctgtccta
ggaatgtttaactaatgggcaatccagtttgtttttcttttttctcagcc
cagcagcatcttatgctcacaaacaccagcatttcgagtatttatatgac
tacaggcctttcatcttccttccatatgtccctttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_98265063_98266160
seq2: B6Ng01-151B01.g_67_1152 (reverse)

seq1  CAAA-GGACATATGAAAGAAAGATGAAAGACCTGTAAGTCATATAAAATA  49
      |||| ||||||||| ||| |||||||||| ||||| |||||||| |||||
seq2  CAAAGGGACATATGGAAGGAAGATGAAAGGCCTGT-AGTCATAT-AAATA  48

seq1  CTCAGAAATTGCTGGTTGTTTGTGAGCCT-AGATGCTGCCTGGGGCTGAG  98
      ||| |||| |||||| ||||||||||| | |||||||||   ||||||||
seq2  CTC-GAAA-TGCTGG-TGTTTGTGAGCATAAGATGCTGC--TGGGCTGAG  93

seq1  AAAAAAGAAAAACAAACCTGGATATGCCCCATAGTTAAAACATTCCTAGG  148
      |||||||||||||||| |||||| |||||  ||||| |||||||||||||
seq2  AAAAAAGAAAAACAAA-CTGGAT-TGCCCATTAGTT-AAACATTCCTAGG  140

seq1  AACAGCCTAACCTTAAAGATAAAGAGG-AATGTGAGGACATAACAGGGCT  197
       ||||| ||  |||||||||||||||| ||||||||||||||||||||||
seq2  -ACAGCTTA--CTTAAAGATAAAGAGGAAATGTGAGGACATAACAGGGCT  187

seq1  ATCTGAACTGAGCAACAACTCACAGAACTCTGACACCCTGCACGTACATG  247
      ||||| ||||||| ||||||||||||||||||||||||||||||||||||
seq2  ATCTG-ACTGAGC-ACAACTCACAGAACTCTGACACCCTGCACGTACATG  235

seq1  TAATTTTTCTGCTAATGTTTGAATAAGCCAATAGTGTGTCGCTATGCTGA  297
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TAATTTTTCTGCTAATGTTTGAATAAGCCAAAAGTGTGTCGCTATGCTGA  285

seq1  ATTCCACACCTCTAAGCCCCTTACCCCATAAAAATCCCTAGCTTTCGAGC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCACACCTCTAAGCCCCTTACCCCATAAAAATCCCTAGCTTTCGAGC  335

seq1  CTCGTGGCCGACATCCATTATCTCCTGTGTGGGATACATGTAGATCTGGA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGTGGCCGACATCCATTATCTCCTGTGTGGGATACATGTAGATCTGGA  385

seq1  GCTCCTTCATTAAACTGCCTCATGTGATTACAGCAATGGATTATCGTGTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTTCATTAAACTGCCTCATGTGATTACAGCAATGGATTATCGTGTT  435

seq1  TCTTAGGGTGCTCTCTCACTCCCGAGACTAGAGTGGGGGGTCCCTGAAAG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGGGTGCTCTCTCACTCCCGAGACTAGAGTGGGGGGTCCCTGAAAG  485

seq1  GGGGTCTTACATGTATAGGGTAAAAAAGAGATAAATAAGATATTTTTAAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTCTTACATGTATAGGGTAAAAAAGAGATAAATAAGATATTTTTAAA  535

seq1  GTCCAAACATAACATAATGAGGCAAAAATAACTCCAAAGATTTTGTTGAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAAACATAACATAATGAGGCAAAAATAACTCCAAAGATTTTGTTGAA  585

seq1  GGTTTTTTTTCTGTTTGTTTGTTTGGTTGGTTGGTTTTTAGTTTTTGGTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTTTTTCTGTTTGTTTGTTTGGTTGGTTGGTTTTTAGTTTTTGGTT  635

seq1  TTGTTTTGTTTTGTTTGTTTTGAGAGATTTGGGTTATATAATTCTGTGTA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTGTTTTGTTTGTTTTGAGAGATTTGGGTTATATAATTCTGTGTA  685

seq1  GCCTAACCTTAAGAGGGAAGAAGTTCCAATTTACAGGTTATTATCCATCA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAACCTTAAGAGGGAAGAAGTTCCAATTTACAGGTTATTATCCATCA  735

seq1  TCAAAGAAATGAGAACAGAAATTCAATCAGAAACATGGAGACAAGAGGAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGAAATGAGAACAGAAATTCAATCAGAAACATGGAGACAAGAGGAA  785

seq1  AGGCAGAGACCAGAGGGACACTACTTACTAGCATGCTTCCTCTGGCTTGC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGAGACCAGAGGGACACTACTTACTAGCATGCTTCCTCTGGCTTGC  835

seq1  TCAGACACCTTTCTTAAACATCTCAGGCCCACTGCCCAGCAATGGCACCC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACACCTTTCTTAAACATCTCAGGCCCACTGCCCAGCAATGGCACCC  885

seq1  CTCAAAGTGTCTGAAAACTCCTACACCAGTTAAAAATTAAAAAAAAAAAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAGTGTCTGAAAACTCCTACACCAGTTAAAAATTAAAAAAAAAAAT  935

seq1  ACCTCACAATATGGTCACAGGCCAGTGTGATCTAAGAAATTTTTCAGTTG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCACAATATGGTCACAGGCCAGTGTGATCTAAGAAATTTTTCAGTTG  985

seq1  TGGTTCCCTCTTTTCAGGTTAATCCACGCATGTGTCCAGTTGACAGCTGA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCCCTCTTTTCAGGTTAATCCACGCATGTGTCCAGTTGACAGCTGA  1035

seq1  AGATGTTATGTACTCTAAAAATTGTTGTAATCCCCTTCAGGGAAAGAATT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTTATGTACTCTAAAAATTGTTGTAATCCCCTTCAGGGAAAGAATT  1085

seq1  C  1098
      |
seq2  C  1086