BAC Information

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BAC

Clone NameB6Ng01-151P23
Chromosome12 (Build37)
Map Location 8,815,150 - 8,958,877
singlet/doubletdoublet
Overlap geneLaptm4a, Matn3
Upstream geneEG668388, Apob, 1110057K04Rik, Gdf7, Hs1bp3, BC106175, Rhob, Slc7a15, LOC100043154, Pum2, F730043H23, Sdc1
Downstream geneWdr35, Ttc32, LOC633030, LOC100042238, Osr1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151P23.bB6Ng01-151P23.g
ACCDH947681DH947682
length1,1001,128
definitionDH947681|Mus musculus domesticus DNA, BAC clone: B6Ng01-151P23, 5' end.DH947682|Mus musculus domesticus DNA, BAC clone: B6Ng01-151P23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,957,764 - 8,958,877)(8,815,150 - 8,816,274)
sequence
gaattccagaggccggacgctacgagaactatcaatgatgaacaccaagt
ccaaaggcctgctcttgcaaacacctgcaaagaagggtatagagaatacc
aaaggctaagcctacattagatcacgatcagaaatgttacagttctcact
cccaaagaactctggggttctggaaagcctgagccaggagcatctcctga
tcccagcagtaccattgccggcttccttcccgagggccatcctcactctg
ctgttaaaaacacccaggccttgagccttcccagcgttttgcttgaggac
ttatctgactgtttaaagttctgttcctgagagtccttgtaagtcctggt
actgaaaggatcccaggccttccttggcacttggcggagacaatgggaca
aggacttcacttaacacatatgcactacatgcagtctttgggagcatatc
ttaaggagcagagaccatgacctagcacttctcctgcttcccctcaactc
tcctggccacttctctttgcattttcccccttgtcacttgcctacagctc
tgccacaagggcagaaaaggagagtcgtcagcttcaaagctcttacattc
tttctacacaaaggcatcttatgtctttagtacgtcaacacacgcttata
gccattctctctctctctctctctctctctctctctctctctctgtctgt
ctgtctgtctttactgcttcctccaacctgatttgcacagccctctctca
cccaactgaactgagtctagtgtcagcactagatgggagagaatccagtt
atcacatctctttttttttttttttcaagccattctctactttctaccaa
cactcacaggaatgcagtacacacacacacacacacacacacacacacac
acacacacacacacacacacacacacacacacacgtatgcacatgtacac
gcacatcagcatagctctaggtgaaaatagagtcctaggagtgtctgtga
ggctctcttcctataaaagagcagatgatgctatttgctcgtccgtagta
gatccaaaacaattcttcgctgtgatgtgggcacagctgtatcatagtac

gaattcattaccccacttctgtgttaatgggggaattttatgattggaag
gccctacctgtatatcctgcctagaatcttgtggaaagggtagtagcaga
cataaaggtactctgccttcttgtgtatagattaggtcccattcttcaga
tgaagaagagaatctgggtcatagtacttgctaactagcataccccatgc
tctgcactgacgggtgtgagaaggagatgccttgctctgtgttagaagaa
gaaaggccttcatgggatttttaagatataattatttttatttcatgtgt
atgagtgttttgcctgcatatatgtctgtgtaccatttgcatgcccaagg
ttcatggaagctagaagaaggctttagctcccctagaacatgagctatca
acagttgtcagttgcaatatgggtgctgggaactgatgttcagtcctctt
caagagcagcaagtccaagtggttgtttaaccactaagccatctctccag
ctttctttctgagtttctcaaggccctggtattacctgtggtcgtcacag
gtccaaggagtttctttcgccttagttcttttattttgccctactaggga
taaagtttatactctgctcttcttaaaggcatgctctctggacctggcca
acctgtgggtcagcttgagttccctgaggcatttggtatctgcctgtgaa
gtaaaaggctggatcaggcttttatcagccagacagttgtgggtaccagc
cccatagactgggcctagagggggcagggtgatggctgaaggctagttaa
cctctcaagagatgtgggtaatcctcttgggccaacagagaaacacactg
tacaaactaccgcagagaatgtgagataagccactaaaggacacacctag
cttagcacctctgtggacagcagcatggtgggtgagaaagagcagaggga
gggccttggaagtgggtcccaggatggggtaatacatggctgtgtcagag
ccatgaaggggcagagtgagtatgtttgatttcctggagaaaggcgaaat
gaataggtgacctcgttgaaaaaaatagccagttgaagtttgttttgaag
ggacaatgttcatcaaggaggcaatgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_8957764_8958877
seq2: B6Ng01-151P23.b_47_1146 (reverse)

seq1  GTACTATGATTACAGCTGGTGCCACCATTCACAGCGAAGAATTTGTTTTT  50
      ||||||||| ||||||| |||||  || |||||||||||||||   ||||
seq2  GTACTATGA-TACAGCT-GTGCCCACA-TCACAGCGAAGAATT--GTTTT  45

seq1  GGATCTACCTACCGACGAGCAAATAGCATCAATCTGCTCTTTTATTAGGA  100
      ||||||| |||| ||||||||||||||||| ||||||||||||| |||| 
seq2  GGATCTA-CTACGGACGAGCAAATAGCATC-ATCTGCTCTTTTA-TAGG-  91

seq1  AAGAAGGAGCCCTCACAGACACCTCCTAAGGACTCTATTTTCACCTAGGG  150
      ||||  ||| ||||||||||| ||||| |||||||||||||||||||| |
seq2  AAGA--GAG-CCTCACAGACA-CTCCT-AGGACTCTATTTTCACCTAGAG  136

seq1  CTATGCTGGTGTGCGTGTACATGTGCATGCGTGTGTGTGTGTGTGTGTGT  200
      |||||||| ||||||||||||||||||| |||||||||||||||||||||
seq2  CTATGCTGATGTGCGTGTACATGTGCATACGTGTGTGTGTGTGTGTGTGT  186

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTT  250
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAC-T  235

seq1  GCATTCCTGTGAGTGTTGGTTGAAAGTAGAGAATGGCTTG-AAAAAAAAA  299
      |||||||||||||||||||| ||||||||||||||||||| |||||||||
seq2  GCATTCCTGTGAGTGTTGGTAGAAAGTAGAGAATGGCTTGAAAAAAAAAA  285

seq1  AAAAAGAGATGTGATAACTGGATTCTCTCCCATCTAGTGCTGACACTAGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAGATGTGATAACTGGATTCTCTCCCATCTAGTGCTGACACTAGA  335

seq1  CTCAGTTCAGTTGGGTGAGAGAGGGCTGTGCAAATCAGGTTGGAGGAAGC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTTCAGTTGGGTGAGAGAGGGCTGTGCAAATCAGGTTGGAGGAAGC  385

seq1  AGTAAAGACAGACAGACAGACAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAGACAGACAGACAGACAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  435

seq1  GAGAGAGAGAATGGCTATAAGCGTGTGTTGACGTACTAAAGACATAAGAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAATGGCTATAAGCGTGTGTTGACGTACTAAAGACATAAGAT  485

seq1  GCCTTTGTGTAGAAAGAATGTAAGAGCTTTGAAGCTGACGACTCTCCTTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTGTGTAGAAAGAATGTAAGAGCTTTGAAGCTGACGACTCTCCTTT  535

seq1  TCTGCCCTTGTGGCAGAGCTGTAGGCAAGTGACAAGGGGGAAAATGCAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCCTTGTGGCAGAGCTGTAGGCAAGTGACAAGGGGGAAAATGCAAA  585

seq1  GAGAAGTGGCCAGGAGAGTTGAGGGGAAGCAGGAGAAGTGCTAGGTCATG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGTGGCCAGGAGAGTTGAGGGGAAGCAGGAGAAGTGCTAGGTCATG  635

seq1  GTCTCTGCTCCTTAAGATATGCTCCCAAAGACTGCATGTAGTGCATATGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTGCTCCTTAAGATATGCTCCCAAAGACTGCATGTAGTGCATATGT  685

seq1  GTTAAGTGAAGTCCTTGTCCCATTGTCTCCGCCAAGTGCCAAGGAAGGCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGTGAAGTCCTTGTCCCATTGTCTCCGCCAAGTGCCAAGGAAGGCC  735

seq1  TGGGATCCTTTCAGTACCAGGACTTACAAGGACTCTCAGGAACAGAACTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATCCTTTCAGTACCAGGACTTACAAGGACTCTCAGGAACAGAACTT  785

seq1  TAAACAGTCAGATAAGTCCTCAAGCAAAACGCTGGGAAGGCTCAAGGCCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAGTCAGATAAGTCCTCAAGCAAAACGCTGGGAAGGCTCAAGGCCT  835

seq1  GGGTGTTTTTAACAGCAGAGTGAGGATGGCCCTCGGGAAGGAAGCCGGCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTTTTTAACAGCAGAGTGAGGATGGCCCTCGGGAAGGAAGCCGGCA  885

seq1  ATGGTACTGCTGGGATCAGGAGATGCTCCTGGCTCAGGCTTTCCAGAACC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTACTGCTGGGATCAGGAGATGCTCCTGGCTCAGGCTTTCCAGAACC  935

seq1  CCAGAGTTCTTTGGGAGTGAGAACTGTAACATTTCTGATCGTGATCTAAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGTTCTTTGGGAGTGAGAACTGTAACATTTCTGATCGTGATCTAAT  985

seq1  GTAGGCTTAGCCTTTGGTATTCTCTATACCCTTCTTTGCAGGTGTTTGCA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGCTTAGCCTTTGGTATTCTCTATACCCTTCTTTGCAGGTGTTTGCA  1035

seq1  AGAGCAGGCCTTTGGACTTGGTGTTCATCATTGATAGTTCTCGTAGCGTC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAGGCCTTTGGACTTGGTGTTCATCATTGATAGTTCTCGTAGCGTC  1085

seq1  CGGCCTCTGGAATTC  1114
      |||||||||||||||
seq2  CGGCCTCTGGAATTC  1100

seq1: chr12_8815150_8816274
seq2: B6Ng01-151P23.g_69_1196

seq1  GAATTCATTACCCCACTTCTGTGTTAATGGGGGAATTTTATGATTGGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTACCCCACTTCTGTGTTAATGGGGGAATTTTATGATTGGAAG  50

seq1  GCCCTACCTGTATATCCTGCCTAGAATCTTGTGGAAAGGGTAGTAGCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTACCTGTATATCCTGCCTAGAATCTTGTGGAAAGGGTAGTAGCAGA  100

seq1  CATAAAGGTACTCTGCCTTCTTGTGTATAGATTAGGTCCCATTCTTCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAGGTACTCTGCCTTCTTGTGTATAGATTAGGTCCCATTCTTCAGA  150

seq1  TGAAGAAGAGAATCTGGGTCATAGTACTTGCTAACTAGCATACCCCATGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAAGAGAATCTGGGTCATAGTACTTGCTAACTAGCATACCCCATGC  200

seq1  TCTGCACTGACGGGTGTGAGAAGGAGATGCCTTGCTCTGTGTTAGAAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCACTGACGGGTGTGAGAAGGAGATGCCTTGCTCTGTGTTAGAAGAA  250

seq1  GAAAGGCCTTCATGGGATTTTTAAGATATAATTATTTTTATTTCATGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGCCTTCATGGGATTTTTAAGATATAATTATTTTTATTTCATGTGT  300

seq1  ATGAGTGTTTTGCCTGCATATATGTCTGTGTACCATTTGCATGCCCAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTGTTTTGCCTGCATATATGTCTGTGTACCATTTGCATGCCCAAGG  350

seq1  TTCATGGAAGCTAGAAGAAGGCTTTAGCTCCCCTAGAACATGAGCTATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGGAAGCTAGAAGAAGGCTTTAGCTCCCCTAGAACATGAGCTATCA  400

seq1  ACAGTTGTCAGTTGCAATATGGGTGCTGGGAACTGATGTTCAGTCCTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTGTCAGTTGCAATATGGGTGCTGGGAACTGATGTTCAGTCCTCTT  450

seq1  CAAGAGCAGCAAGTCCAAGTGGTTGTTTAACCACTAAGCCATCTCTCCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGCAGCAAGTCCAAGTGGTTGTTTAACCACTAAGCCATCTCTCCAG  500

seq1  CTTTCTTTCTGAGTTTCTCAAGGCCCTGGTATTACCTGTGGTCGTCACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTCTGAGTTTCTCAAGGCCCTGGTATTACCTGTGGTCGTCACAG  550

seq1  GTCCAAGGAGTTTCTTTCGCCTTAGTTCTTTTATTTTGCCCTACTAGGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAAGGAGTTTCTTTCGCCTTAGTTCTTTTATTTTGCCCTACTAGGGA  600

seq1  TAAAGTTTATACTCTGCTCTTCTTAAAGGCATGCTCTCTGGACCTGGCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTTTATACTCTGCTCTTCTTAAAGGCATGCTCTCTGGACCTGGCCA  650

seq1  ACCTGTGGGTCAGCTTGAGTTCCCTGAGGCATTTGGTATCTGCCTGTGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTGGGTCAGCTTGAGTTCCCTGAGGCATTTGGTATCTGCCTGTGAA  700

seq1  GTAAAAGGCTGGATCAGGCTTTTATCAGCCAGACAGTTGTGGGTACCAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAGGCTGGATCAGGCTTTTATCAGCCAGACAGTTGTGGGTACCAGC  750

seq1  CCCATAGACTGGGCCTAGAGGGGGCAGGGTGATGGCTGAAGGCTAGTTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATAGACTGGGCCTAGAGGGGGCAGGGTGATGGCTGAAGGCTAGTTAA  800

seq1  CCTCTCAAGAGATGT-GGTAATCCTCTTGGGCCAACAGAGAAACACACTG  849
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CCTCTCAAGAGATGTGGGTAATCCTCTTGGGCCAACAGAGAAACACACTG  850

seq1  TACAAACTACCGCAGAGAATGTGAGATAAGCCACT-AAGGACACACCTAG  898
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TACAAACTACCGCAGAGAATGTGAGATAAGCCACTAAAGGACACACCTAG  900

seq1  CTTAGCACCTCTGTGGACAGCAGCATGGTGGGTGAGAAAGAGCAGAGGGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCACCTCTGTGGACAGCAGCATGGTGGGTGAGAAAGAGCAGAGGGA  950

seq1  GGGCCTTGGAAGTGGGTCCCAGGATGGGGTAATACATGGCTGTGGTCAGA  998
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GGGCCTTGGAAGTGGGTCCCAGGATGGGGTAATACATGGCTGT-GTCAGA  999

seq1  GCCATGAAGGGGCAGAGTGAAGTATGTTTGATTTCCTGGGAGAAGGCGAA  1048
      ||||||||||||||||||| |||||||||||||||||||   ||||||||
seq2  GCCATGAAGGGGCAGAGTG-AGTATGTTTGATTTCCTGGAGAAAGGCGAA  1048

seq1  ATGAATA-GTGACTCAGTTG--AGAAATAGCCAGTTGAGTGTTTGTTTTT  1095
      ||||||| |||||   ||||  | ||||||||||||||  ||||| ||||
seq2  ATGAATAGGTGACCTCGTTGAAAAAAATAGCCAGTTGA-AGTTTG-TTTT  1096

seq1  GGAAGGACAATG-TCATC-AGGAGGCAATGCA  1125
      | | |||||||| ||||| |||||||||||||
seq2  GAAGGGACAATGTTCATCAAGGAGGCAATGCA  1128