BAC Information

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BAC

Clone NameB6Ng01-152P21
Chromosome12 (Build37)
Map Location 99,411,686 - 99,581,160
singlet/doubletdoublet
Overlap geneGalc, Gpr65
Upstream geneLOC382626, LOC100039743, LOC667732, LOC628351, LOC100039770, LOC667746
Downstream geneKcnk10, Spata7, Ptpn21, Zc3h14, Eml5, LOC100039845, Ttc8, EG667779, Ches1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152P21.bB6Ng01-152P21.g
ACCDH948429DH948430
length9861,073
definitionDH948429|Mus musculus domesticus DNA, BAC clone: B6Ng01-152P21, 5' end.DH948430|Mus musculus domesticus DNA, BAC clone: B6Ng01-152P21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(99,580,176 - 99,581,160)(99,411,686 - 99,412,752)
sequence
gaattcttaattttaatgatcgaaaataatctgtgaggggtccacggacc
actgactagatttttcttgttgggagagacaacttttagcttgttgaagt
ctctacaatgtgggatgatctggcacttaagactgaaacattttaactca
tcacacaaattgttgcatgcccacaaggattgggtttgatacggagttat
ttacaggcagatcatgtttaacaaaataagaatgttggtttaatttgatc
aagatacaccataaatatataaaattactgaactttcccatgtaacttaa
tacatttaaaaaacaatattaagagaaaggatagcacattgggctggaaa
ttctagtttgtgcttctggctcatggagagggcagacccccccccctttc
tttttcacttttaaaattcccttaatttttattacaggtgtacataaatg
gattgattatagtattacaccatgatataatctcatattagttacttttt
tgagatttgtttttattttatgtttatgggtgttttgactgtgtgtctaa
gcactgtgtccatgcagttcccatggtggccacaagggtgtgtacccctt
ggaactggagttacagactgttgttagccctgggtgctggaaatggaccc
cagatgtgacctaatgtctttagctgtgtagatctcaaagcttgagccat
ggtgtttgatctggcaaggaaagctcccgcaggtggtgaacttgcagctt
ccttagagctgtagaattcatagaagcaagggagtgccgaaatctctgtt
ttaagtctggcctctcagcctttctttaagggcccagcagatatcatgat
gcccttctggggaagtgttcttttatttccaatctatcgttggggaattt
agtttcctttaaaacaaatttgtcttattattttaaattctctctctctc
tctctctctctctctctctctctctgtgagtgtgtg
gaattctctcccttagaagctccacaaggacacatctctgttgacatctt
aattgtagtcctataagacccccataagactcattgagacttctaacctc
tagaaccggaagataataaatgtgcatgtttaagccactcactgtgtgtg
gcttgttacagctgcagtagggaagtattagagtcgctttgcactagtta
accatgggatctggatttaacagtggtgtcccttgcgtgtggggagcggg
tgtggcggcagtcccaaaggcgccagagactgcagctaagtcatatgact
tgcacctgacttcctcatataagacataaacatcttgagtgctgggcagg
tgtaccaggatacaggtgaatccaatttggtggagatttgcccctgctgc
cctgattagctgaagcctcgtgactggcgagggggcgtggcctgcggtgt
gtggatgagagagagtataaaagagtgagaggcccagggttcgggggaga
tataaaaacaagggagatataaaaacaagggagatataaaaacaagggag
atataaacaagggagatataaacaagggagatatatggagaaagaagaaa
caggactgaataaatgtgtgcagaaggatcctgtagcagcgtcgttcttg
ctggcgagttgggggcgcgctcgagagttggtgctgaaacccgggacaag
aaacatcttcaggcaagagcgaagaccccctgctacaggaaggattcaga
actgcataacggggaagaaggggtttaataaagtgttcccgtaaaacaga
ctgttgagaaggatccggcgtggattcagaactctttagctgggaacggt
accgatgaagagaaagaagaaagatgaagactgaataaacctgctggtta
gaaggactggttggtctcgtcgttcttgcttggtcgaaagcaggcgcgac
aaatggtgtcccgtatcggggaaccgactccccccaccgagttcagaact
tttcagcagtcagtggttgctggcaggttaagttcaccgtgcagtgaact
tgcatccccagacttgggaagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_99580176_99581160
seq2: B6Ng01-152P21.b_43_1028 (reverse)

seq1  CACACACTCACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACTCACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAT  50

seq1  TTAAAATAATAAGACAAATTTGTTTTTAAGGAAACTAAATTCCCCAACGA  100
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TTAAAATAATAAGACAAATTTGTTTTAAAGGAAACTAAATTCCCCAACGA  100

seq1  TAGATTGGAAATAAAAGAACACTTCCCCAGAAGGGCATCATGATATCTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTGGAAATAAAAGAACACTTCCCCAGAAGGGCATCATGATATCTGC  150

seq1  TGGGCCCTTAAAG-AAGGCTGAGAGGCCAGACTTAAAACAGAGATTTCGG  199
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TGGGCCCTTAAAGAAAGGCTGAGAGGCCAGACTTAAAACAGAGATTTCGG  200

seq1  CACTCCCTTGCTTCTATGAATTCTACAGCTCTAAGGAAGCTGCAAGTTCA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCCTTGCTTCTATGAATTCTACAGCTCTAAGGAAGCTGCAAGTTCA  250

seq1  CCACCTGCGGGAGCTTTCCTTGCCAGATCAAACACCATGGCTCAAGCTTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTGCGGGAGCTTTCCTTGCCAGATCAAACACCATGGCTCAAGCTTT  300

seq1  GAGATCTACACAGCTAAAGACATTAGGTCACATCTGGGGTCCATTTCCAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATCTACACAGCTAAAGACATTAGGTCACATCTGGGGTCCATTTCCAG  350

seq1  CACCCAGGGCTAACAACAGTCTGTAACTCCAGTTCCAAGGGGTACACACC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCAGGGCTAACAACAGTCTGTAACTCCAGTTCCAAGGGGTACACACC  400

seq1  CTTGTGGCCACCATGGGAACTGCATGGACACAGTGCTTAGACACACAGTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGGCCACCATGGGAACTGCATGGACACAGTGCTTAGACACACAGTC  450

seq1  AAAACACCCATAAACATAAAATAAAAACAAATCTCAAAAAAGTAACTAAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACCCATAAACATAAAATAAAAACAAATCTCAAAAAAGTAACTAAT  500

seq1  ATGAGATTATATCATGGTGTAATACTATAATCAATCCATTTATGTACACC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGATTATATCATGGTGTAATACTATAATCAATCCATTTATGTACACC  550

seq1  TGTAATAAAAATTAAGGGAATTTTAAAAGTGAAAAAGAAAGGGGGGGGGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATAAAAATTAAGGGAATTTTAAAAGTGAAAAAGAAAGGGGGGGGGG  600

seq1  TCTGCCCTCTCCATGAGCCAGAAGCACAAACTAGAATTTCCAGCCCAATG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCCTCTCCATGAGCCAGAAGCACAAACTAGAATTTCCAGCCCAATG  650

seq1  TGCTATCCTTTCTCTTAATATTGTTTTTTAAATGTATTAAGTTACATGGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATCCTTTCTCTTAATATTGTTTTTTAAATGTATTAAGTTACATGGG  700

seq1  AAAGTTCAGTAATTTTATATATTTATGGTGTATCTTGATCAAATTAAACC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTCAGTAATTTTATATATTTATGGTGTATCTTGATCAAATTAAACC  750

seq1  AACATTCTTATTTTGTTAAACATGATCTGCCTGTAAATAACTCCGTATCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTCTTATTTTGTTAAACATGATCTGCCTGTAAATAACTCCGTATCA  800

seq1  AACCCAATCCTTGTGGGCATGCAACAATTTGTGTGATGAGTTAAAATGTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAATCCTTGTGGGCATGCAACAATTTGTGTGATGAGTTAAAATGTT  850

seq1  TCAGTCTTAAGTGCCAGATCATCCCACATTGTAGAGACTTCAACAAGCTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCTTAAGTGCCAGATCATCCCACATTGTAGAGACTTCAACAAGCTA  900

seq1  AAAGTTGTCTCTCCCAACAAGAAAAATCTAGTCAGTGGTCCGTGGACCCC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTGTCTCTCCCAACAAGAAAAATCTAGTCAGTGGTCCGTGGACCCC  950

seq1  TCACAGATTATTTTCGATCATTAAAATTAAGAATTC  985
      ||||||||||||||||||||||||||||||||||||
seq2  TCACAGATTATTTTCGATCATTAAAATTAAGAATTC  986

seq1: chr12_99411686_99412752
seq2: B6Ng01-152P21.g_71_1143

seq1  GAATTCTCTCCCTTAGAAGCTCCACAAGGACACATCTCTGTTGACATCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCCCTTAGAAGCTCCACAAGGACACATCTCTGTTGACATCTT  50

seq1  AATTGTAGTCCTATAAGACCCCCATAAGACTCATTGAGACTTCTAACCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTAGTCCTATAAGACCCCCATAAGACTCATTGAGACTTCTAACCTC  100

seq1  TAGAACCGGAAGATAATAAATGTGCATGTTTAAGCCACTCACTGTGTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACCGGAAGATAATAAATGTGCATGTTTAAGCCACTCACTGTGTGTG  150

seq1  GCTTGTTACAGCTGCAGTAGGGAAGTATTAGAGTCGCTTTGCACTAGTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTTACAGCTGCAGTAGGGAAGTATTAGAGTCGCTTTGCACTAGTTA  200

seq1  ACCATGGGATCTGGATTTAACAGTGGTGTCCCTTGCGTGTGGGGAGCGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGGGATCTGGATTTAACAGTGGTGTCCCTTGCGTGTGGGGAGCGGG  250

seq1  TGTGGCGGCAGTCCCAAAGGCGCCAGAGACTGCAGCTAAGTCATATGACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCGGCAGTCCCAAAGGCGCCAGAGACTGCAGCTAAGTCATATGACT  300

seq1  TGCACCTGACTTCCTCATATAAGACATAAACATCTTGAGTGCTGGGCAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACCTGACTTCCTCATATAAGACATAAACATCTTGAGTGCTGGGCAGG  350

seq1  TGTACCAGGATACAGGTGAATCCAATTTGGTGGAGATTTGCCCCTGCTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACCAGGATACAGGTGAATCCAATTTGGTGGAGATTTGCCCCTGCTGC  400

seq1  CCTGATTAGCTGAAGCCTCGTGACTGGCGAGGGGGCGTGGCCTGCGGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATTAGCTGAAGCCTCGTGACTGGCGAGGGGGCGTGGCCTGCGGTGT  450

seq1  GTGGATGAGAGAGAGTATAAAAGAGTGAGAGGCCCAGGGTTCGGGGGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATGAGAGAGAGTATAAAAGAGTGAGAGGCCCAGGGTTCGGGGGAGA  500

seq1  TATAAAAACAAGGGAGATATAAAAACAAGGGAGATATAAAAACAAGGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAACAAGGGAGATATAAAAACAAGGGAGATATAAAAACAAGGGAG  550

seq1  ATATAAACAAGGGAGATATAAACAAGGGAGATATATGGAGAAAGAAGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAACAAGGGAGATATAAACAAGGGAGATATATGGAGAAAGAAGAAA  600

seq1  CAGGACTGAATAAATGTGTGCAGAAGGATCCTGTAGCAGCGTCGTTCTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACTGAATAAATGTGTGCAGAAGGATCCTGTAGCAGCGTCGTTCTTG  650

seq1  CTGGCGAGTTGGGGGCGCGCTCGAGAGTTGGTGCTGAAACCCGGGACAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCGAGTTGGGGGCGCGCTCGAGAGTTGGTGCTGAAACCCGGGACAAG  700

seq1  AAACATCTTCAGGCAAGAGCGAAGACCCCCTGCTACAGGAAGGATTCAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATCTTCAGGCAAGAGCGAAGACCCCCTGCTACAGGAAGGATTCAGA  750

seq1  ACTGCATAACGGGGAAGAAGGGG-TTAATAAAGTGTTCCCGTAAAACAGA  799
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ACTGCATAACGGGGAAGAAGGGGTTTAATAAAGTGTTCCCGTAAAACAGA  800

seq1  CTGTTGAGAAGGATCCGGCGTGGATTCAGAACTCTTCAGCTGGGAACGGT  849
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CTGTTGAGAAGGATCCGGCGTGGATTCAGAACTCTTTAGCTGGGAACGGT  850

seq1  ACTGATGAAGAGAAAGAAGAAAGATGAAGACTGAATAAA-CTGCT-GTTA  897
      || |||||||||||||||||||||||||||||||||||| ||||| ||||
seq2  ACCGATGAAGAGAAAGAAGAAAGATGAAGACTGAATAAACCTGCTGGTTA  900

seq1  GAAGGACTGG-TGGTCGCGTCGTTCTTGC-TGGTCGAGAGCAGGCGCGAC  945
      |||||||||| ||||| |||||||||||| ||||||| ||||||||||||
seq2  GAAGGACTGGTTGGTCTCGTCGTTCTTGCTTGGTCGAAAGCAGGCGCGAC  950

seq1  AATTGGTGGCCCGTA-CGGGGAACCGACT-CCCCCACCGAGTTCAGAAC-  992
      || ||||| |||||| ||||||||||||| ||||||||||||||||||| 
seq2  AAATGGTGTCCCGTATCGGGGAACCGACTCCCCCCACCGAGTTCAGAACT  1000

seq1  TTTCAGCAGTCAGTGGTTGCTGGCAGGGTAAGTTCACGGTG-AGTGAAAC  1041
      ||||||||||||||||||||||||||| ||||||||| ||| |||| |||
seq2  TTTCAGCAGTCAGTGGTTGCTGGCAGGTTAAGTTCACCGTGCAGTG-AAC  1049

seq1  TTGCAACCCCAGGAGTTTGGGAAGGA  1067
      ||||| ||||||    ||||||||||
seq2  TTGCATCCCCAG--ACTTGGGAAGGA  1073