BAC Information

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BAC

Clone NameB6Ng01-153C22
Chromosome12 (Build37)
Map Location 116,944,822 - 116,945,576
singlet/doubletsinglet
Overlap geneIgh
Upstream geneIghv1-19, EG668497, Ighv1-21-1, Ighv1-21, Ighv1-22, Ighv1-23, Ighv1-24, Ighv1-25, Ighv1-26, Ighv1-27, Ighv1-28, Ighv1-29, Ighv1-30, Ighv1-31, Ighv1-32, Ighv1-33, Ighv1-34, EG668515, Ighv1-36, Ighv1-37, Ighv1-38, Ighv1-39, Ighv1-40, Ighv1-41, EG629906, EG629908, Ighv1-44, Ighv1-45, Ighv1-46, Ighv1-47, Ighv8-3, EG629919, Ighv1-48, Ighv1-49, EG640506, Ighv1-50, Ighv1-51, Ighv1-52, Ighv1-53, EG629930, EG668534, EG211331, Ighv1-55, EG634662, Ighv1-56, EG629936, Ighv8-7, Ighv1-57, Ighv8-8, Ighv1-58, EG432708, Ighv1-60, Ighv1-61, Ighv1-62, EG668544, EG238448, EG668549, EG432709, EG668552, Ighv1-63, Ighv1-64, Ighv8-10, Ighv1-65, EG668554, EG636462, LOC217924, Ighv1-66, EG435328, Ighv1-68, LOC435329, EG668563, Ighv1-69, Ighv8-12, LOC619863, EG638634
Downstream geneEG619886, Ighv1-72, EG668575, EG668577, EG668582, Ighv1-75, Ighv1-77, Ighv1-78, GA_x5J8B7W27DS-1519-2216, Ighv1-79, LOC668586, Ighv1-80, Ighv1-81, Olfr241-ps1, Ighv1-83, EG434609, LOC668595, EG668597, EG668599, Zfp386, Vipr2, LOC676058, Wdr60, LOC100042963, D12Ertd551e, D430020J02Rik, Ncapg2, Rnu7-ps1, Ptprn2, LOC627375
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153C22.bB6Ng01-153C22.g
ACCDH948566DH948567
length986453
definitionDH948566|Mus musculus domesticus DNA, BAC clone: B6Ng01-153C22, 5' end.DH948567|Mus musculus domesticus DNA, BAC clone: B6Ng01-153C22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtaaaaagtgacttagtattattttgtccatcatagaggaatt
acactaatgtggctttgtgtcaggagccattttcccaacttctgtgaaag
tctgtctgtcaggcatagtcaaggcagaaggggtgaatgtaatgttaatc
ctagaaaaagcaactgggtggctcctggagtggcagtacatatccactgt
atgtcagccattgtctcggccagattgtgacttttttccacaatactgta
aagtatattatgagggtttgtatgttcgaggcccagggactggcacagtt
agaaggtgtggccctgttggagtaggtgtgtcaacctgggtgtggactat
aagacagaagtttggtactatgtactgggatattgctttgatatgcctga
ccatgcttttttggaagaacgtggattttgggactttgaatttagaaagc
attggaatgctttaattggggcttaatgtgctagcctagaagaaggaata
tggaagactttgttgctgttggtggagaagaatttcaatatgtggcctag
agtctatatttgcggtattttgctaaagaatgtggctaattcttgtcctt
gtctgaagagtctccctgagtctaaggtgaagagactcagtaattgcacc
catcataaactttgttctgtgcttaagtctcataaagaacattttaaaca
atcatagcaacctgagaaaaggaaaatataaaatatatggtttgagcact
aattggacaccacaacctgaaatggggctgaatcctgtgatcaggatatt
aaattgaattaaagggagtagtgatttggggaaagatcccaccagctacg
tttaggtctaggcatggtactacatgtctttaatctcagaggcaaagaca
agcagttctctgagttcaaggccctcctacagcacattctacatggagaa
aactttaaatccaagcttggtaaacgagacctttaa
atcccatcaaaacccattaaacccagacacttttgcagatgccaaggaga
gcttcctgataggagactgatatagttttctcctgagaggttctgccagt
gtctgactaatacattagtggatgctgatagtcacctattagatggagca
cagggtccccaatgaaggatctagagaaaatacccaaggagatgaagggg
tttgcagcaccataggagtaccaacaatatgaactcaccagtacttccca
gagcttcctttgactaaacagttaatgaaggaaaacatatggtgggactc
atgtctctagctgcatttgtagcagaggatggcctagtcagccatgaatg
ggagacgaggcccttggtattgtgaatgttctatgctccagtgtagggga
atgccagggccaggaagtgggaatagatgggttggggaataggttgaggg
gaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_116944822_116945576
seq2: B6Ng01-153C22.b_40_794

seq1  GAATTCTGTAAAAAGTGACTTAGTATTATTTTGTCCATCATAGAGGAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTAAAAAGTGACTTAGTATTATTTTGTCCATCATAGAGGAATT  50

seq1  ACACTAATGTGGCTTTGTGTCAGGAGCCATTTTCCCAACTTCTGTGAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTAATGTGGCTTTGTGTCAGGAGCCATTTTCCCAACTTCTGTGAAAG  100

seq1  TCTGTCTGTCAGGCATAGTCAAGGCAGAAGGGGTGAATGTAATGTTAATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTGTCAGGCATAGTCAAGGCAGAAGGGGTGAATGTAATGTTAATC  150

seq1  CTAGAAAAAGCAACTGGGTGGCTCCTGGAGTGGCAGTACATATCCACTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAAAAGCAACTGGGTGGCTCCTGGAGTGGCAGTACATATCCACTGT  200

seq1  ATGTCAGCCATTGTCTCGGCCAGATTGTGACTTTTTTCCACAATACTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCAGCCATTGTCTCGGCCAGATTGTGACTTTTTTCCACAATACTGTA  250

seq1  AAGTATATTATGAGGGTTTGTATGTTCGAGGCCCAGGGACTGGCACAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATATTATGAGGGTTTGTATGTTCGAGGCCCAGGGACTGGCACAGTT  300

seq1  AGAAGGTGTGGCCCTGTTGGAGTAGGTGTGTCAACCTGGGTGTGGACTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGTGTGGCCCTGTTGGAGTAGGTGTGTCAACCTGGGTGTGGACTAT  350

seq1  AAGACAGAAGTTTGGTACTATGTACTGGGATATTGCTTTGATATGCCTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGAAGTTTGGTACTATGTACTGGGATATTGCTTTGATATGCCTGA  400

seq1  CCATGCTTTTTTGGAAGAACGTGGATTTTGGGACTTTGAATTTAGAAAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCTTTTTTGGAAGAACGTGGATTTTGGGACTTTGAATTTAGAAAGC  450

seq1  ATTGGAATGCTTTAATTGGGGCTTAATGTGCTAGCCTAGAAGAAGGAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGAATGCTTTAATTGGGGCTTAATGTGCTAGCCTAGAAGAAGGAATA  500

seq1  TGGAAGACTTTGTTGCTGTTGGTGGAGAAGAATTTCAATATGTGGCCTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGACTTTGTTGCTGTTGGTGGAGAAGAATTTCAATATGTGGCCTAG  550

seq1  AGTCTATATTTGCGGTATTTTGCTAAAGAATGTGGCTAATTCTTGTCCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTATATTTGCGGTATTTTGCTAAAGAATGTGGCTAATTCTTGTCCTT  600

seq1  GTCTGAAGAGTCTCCCTGAGTCTAAGGTGAAGAGACTCAGTAATTGCACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGAAGAGTCTCCCTGAGTCTAAGGTGAAGAGACTCAGTAATTGCACC  650

seq1  CATCATAAACTTTGTTCTGTGCTTAAGTCTCATAAAGAACATTTTAAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATAAACTTTGTTCTGTGCTTAAGTCTCATAAAGAACATTTTAAACA  700

seq1  ATCATAGCAACCTGAGAAAAGGAAAATATAAAATATATGGTTTGAGCACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATAGCAACCTGAGAAAAGGAAAATATAAAATATATGGTTTGAGCACT  750

seq1  AATTG  755
      |||||
seq2  AATTG  755