BAC Information

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BAC

Clone NameB6Ng01-157A13
Chromosome12 (Build37)
Map Location 119,586,685 - 119,587,808
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042461, Rapgef5, A930023M06Rik, Cdca7l, Dnahc11, Sp4
Downstream geneLOC100042993, LOC668611, EG668615, LOC620665, Sp8, Abcb5, Itgb8, EG627557
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157A13.bB6Ng01-157A13.g
ACCDH951376DH951377
length1,115308
definitionDH951376|Mus musculus domesticus DNA, BAC clone: B6Ng01-157A13, 5' end.DH951377|Mus musculus domesticus DNA, BAC clone: B6Ng01-157A13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacagaaaacttgggaattgactaagcataagagtatataaaacc
ggcagctcaagacaaaggactcatgagaagcaaaatgcttgtgcaaagtc
agtgcttttacagaacaacacggttcttctttccaatgagtattcactaa
tttattaagtgggctttgcactttcaatgcttatttttttccattcaaga
tatcttcttaatcaaagcacacctaactcttctcatggggctattacaac
aatctcgctcaggagtctggaggcccattagagaaggctattctctggct
ttagtggagacctaacaacccaagctacacaaaacacaaaaagagtgaat
cctgaagtgcgggaggtaacccagcagtgctggttaatcacctgtctaag
ggagtacccctcaggaagacaggctaaccctaagccatgctagagaggta
gaataactatcccattaatggtctgatactttcccttcctagaattctca
catccagtgcagttgctatcaaccaccatgaggttctactgggttcaccc
agctttctgaatcttgacttttccatcacatggctgaactccatgcctaa
cttaaatggcacagatcttttgctatctcttaagtgcctacctatgaatt
tatgataaactttcccctaaaatgtatccttagtggttcatgaagttcat
tctttgaattctagaggcaaaagcatgaaatcgattgttttgaggcaact
ttggtggctgttcgatttctgggacactaactttctgagaaaaatcccac
agagaccccaatatttcttcatggtccttcacgtgactctcaccagaaag
aatacagttgcaaatgcgttcttcatttacagtgcaagcagacagtacaa
gggccatcatcaccgcaggataaagagccctgcccctattctcctctcca
aagcagcagagccgaagttgaggggttcagaaagctccaggccaataaat
acaaatacagacacaataaatctagcctgtgagaatgaggtggattgggg
tctgaggaaacaggtcatcttctgggacaatgtgctgaaagagagaagtg
acttctggttgccct

acaaaagaataaacagaaatggccaatacatggttttaagagtgctcaac
atccttagctgtaaggaaatgcaagttgaaattgctttgagattctgttt
tcatccatgccagatcctggaaagggtgtgtgaagagaagcatccttctt
tactgctggggtgtgcagccagtatgggaatcactgtggaggttttgcaa
aagactaaaaatattactaccatatgacccagctttactactcctgggca
tatattgctgaaggtctctgtattggatggtttgtgtgtgtgtgtgtgtg
tgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_119586685_119587808
seq2: B6Ng01-157A13.b_45_1159 (reverse)

seq1  AGGGCAACACGGAAGTCACTTCTCTCCTTTCAGCACATTGGTCCCAGAGA  50
      |||||||| | |||||||||||||| ||||||||||||| ||||||||  
seq2  AGGGCAAC-CAGAAGTCACTTCTCT-CTTTCAGCACATT-GTCCCAGAAG  47

seq1  TTGACCTCGTGTCCTCAGACCCCAATCCACCTCATCCTCACAGGCCTTGA  100
       |||||| || |||||||||||||||||||||||| |||||||| || ||
seq2  ATGACCT-GTTTCCTCAGACCCCAATCCACCTCATTCTCACAGG-CTAGA  95

seq1  TTTATTTGTGTCTGTATTTTGTATTTATTTGGCCTGGGGCTTTCTGAACC  150
      |||| ||||||||||| |||||||||| ||||||||| ||||||||||||
seq2  TTTA-TTGTGTCTGTA-TTTGTATTTA-TTGGCCTGGAGCTTTCTGAACC  142

seq1  CCTCAACTTCGGCTCTTGCTGCTTTGGAGAGGAGAATAGGGGCAGGGCTC  200
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CCTCAACTTCGGCTC-TGCTGCTTTGGAGAGGAGAATAGGGGCAGGGCTC  191

seq1  TTTATCCTGCGGTGATGATGGCCCTTGTACTGTCTGCTTGCACTGTAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCCTGCGGTGATGATGGCCCTTGTACTGTCTGCTTGCACTGTAAAT  241

seq1  GAAGAACGCATTTGCAACTGTATTCTTTCTGGTGAGAGTCACGTGAAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAACGCATTTGCAACTGTATTCTTTCTGGTGAGAGTCACGTGAAGGA  291

seq1  CCATGAAGAAATATTGGGGTCTCTGTGGGATTTTTCTCAGAAAGTTAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGAAGAAATATTGGGGTCTCTGTGGGATTTTTCTCAGAAAGTTAGTG  341

seq1  TCCCAGAAATCGAACAGCCACCAAAGTTGCCTCAAAACAATCGATTTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGAAATCGAACAGCCACCAAAGTTGCCTCAAAACAATCGATTTCAT  391

seq1  GCTTTTGCCTCTAGAATTCAAAGAATGAACTTCATGAACCACTAAGGATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTGCCTCTAGAATTCAAAGAATGAACTTCATGAACCACTAAGGATA  441

seq1  CATTTTAGGGGAAAGTTTATCATAAATTCATAGGTAGGCACTTAAGAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTAGGGGAAAGTTTATCATAAATTCATAGGTAGGCACTTAAGAGAT  491

seq1  AGCAAAAGATCTGTGCCATTTAAGTTAGGCATGGAGTTCAGCCATGTGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAAGATCTGTGCCATTTAAGTTAGGCATGGAGTTCAGCCATGTGAT  541

seq1  GGAAAAGTCAAGATTCAGAAAGCTGGGTGAACCCAGTAGAACCTCATGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAGTCAAGATTCAGAAAGCTGGGTGAACCCAGTAGAACCTCATGGT  591

seq1  GGTTGATAGCAACTGCACTGGATGTGAGAATTCTAGGAAGGGAAAGTATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGATAGCAACTGCACTGGATGTGAGAATTCTAGGAAGGGAAAGTATC  641

seq1  AGACCATTAATGGGATAGTTATTCTACCTCTCTAGCATGGCTTAGGGTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCATTAATGGGATAGTTATTCTACCTCTCTAGCATGGCTTAGGGTTA  691

seq1  GCCTGTCTTCCTGAGGGGTACTCCCTTAGACAGGTGATTAACCAGCACTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTCTTCCTGAGGGGTACTCCCTTAGACAGGTGATTAACCAGCACTG  741

seq1  CTGGGTTACCTCCCGCACTTCAGGATTCACTCTTTTTGTGTTTTGTGTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTTACCTCCCGCACTTCAGGATTCACTCTTTTTGTGTTTTGTGTAG  791

seq1  CTTGGGTTGTTAGGTCTCCACTAAAGCCAGAGAATAGCCTTCTCTAATGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGTTGTTAGGTCTCCACTAAAGCCAGAGAATAGCCTTCTCTAATGG  841

seq1  GCCTCCAGACTCCTGAGCGAGATTGTTGTAATAGCCCCATGAGAAGAGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCAGACTCCTGAGCGAGATTGTTGTAATAGCCCCATGAGAAGAGTT  891

seq1  AGGTGTGCTTTGATTAAGAAGATATCTTGAATGGAAAAAAATAAGCATTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTGCTTTGATTAAGAAGATATCTTGAATGGAAAAAAATAAGCATTG  941

seq1  AAAGTGCAAAGCCCACTTAATAAATTAGTGAATACTCATTGGAAAGAAGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGCAAAGCCCACTTAATAAATTAGTGAATACTCATTGGAAAGAAGA  991

seq1  ACCGTGTTGTTCTGTAAAAGCACTGACTTTGCACAAGCATTTTGCTTCTC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGTGTTGTTCTGTAAAAGCACTGACTTTGCACAAGCATTTTGCTTCTC  1041

seq1  ATGAGTCCTTTGTCTTGAGCTGCCGGTTTTATATACTCTTATGCTTAGTC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTCCTTTGTCTTGAGCTGCCGGTTTTATATACTCTTATGCTTAGTC  1091

seq1  AATTCCCAAGTTTTCTGTGAATTC  1124
      ||||||||||||||||||||||||
seq2  AATTCCCAAGTTTTCTGTGAATTC  1115


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