BAC Information

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BAC

Clone NameB6Ng01-157C05
Chromosome12 (Build37)
Map Location 32,631,616 - 32,631,846
singlet/doubletsinglet
Overlap geneHbp1
Upstream geneSh3yl1, LOC629656, 9030611O19Rik, LOC668781, LOC100043065, LOC100043514, EG629667, LOC100043068, Lamb1-1, Dld, LOC668786, Slc26a3, Cbll1, Slc26a4, LOC100043531, Bcap29, Dus4l, LOC100043081, Gpr22
Downstream genePrkar2b, Pik3cg, 2010109K11Rik, LOC100043548, Pbef1, LOC100043553, 4933406C10Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157C05.bB6Ng01-157C05.g
ACCDH951456DH951457
length6061,142
definitionDH951456|Mus musculus domesticus DNA, BAC clone: B6Ng01-157C05, 5' end.DH951457|Mus musculus domesticus DNA, BAC clone: B6Ng01-157C05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagctctgagccccatttttaatggggttttttgattt
tctggagttaaacgcatgaaactcaagaagaacgaagaccaaagtgtgga
caactttgcccctacttagaattgggaacaaaacacccatggaaggagtt
acagagacaacgtttggagctgtgactaaaggatggaccatctagagact
gccatatctggggatccatcccataatcagcttccaaacactgacaccat
tgcatacactagcaagattttgctgaaaggacccagatagagctgtctct
tgtgagactatgccggagcctagcaaacacagaagtggatgctcacagtc
aactattggatggatcacagggcccccaatggaggacctagagaaagtac
ccaaggagctaaagggatctgcagtcctataggtggaacaacaatatgaa
ctaaccagtacccaccccccacccctgagctcatgtctctagctgcatat
gaatcagaagatggcctagttggccatcagtgtaaagagaggcccattgg
ttgtgcaaactttatatgtctcagtacaggggaaccacagggccaagaag
tgggag
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatccaacgagatgatcatgtggtttttgtcttt
gagtttgtttatatagtggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaacgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttgggt
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactattaataactgcttctatttct
ttaggtgatatgggactgtttagatgatcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaaaggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcacccctgagtttgattat
ttcctgccgtctactctcttggtgaatttgcttcctttttttctaggctt
ttagatgtgtgtcagctgctagtatgtgctgtctccgtttcttcttgagc
actcagcgctatgagttctctagaaatgctcattggtcctaggtgggtac
gttggctcatttcataacctaaagctatgtcttctattcctcctggacag
gatcttaggagagtatcattcacgtaagttgccttcatatttgttatcga
gacgctagcctagggcctgagaactggacatcaattttactc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_32631616_32631846
seq2: B6Ng01-157C05.b_365_651 (reverse)

seq1  CTCCCACTTCTTGGCCCTG-------------------------------  19
      |||||||||||||||||||                               
seq2  CTCCCACTTCTTGGCCCTGTGGTTCCCCTGTACTGAGACATATAAAGTTT  50

seq1  GCAAGACCCATGGGCCTCTCTTTCCACTGA----------------CTTC  53
      |||  ||| |||||||||||||| ||||||                ||||
seq2  GCACAACCAATGGGCCTCTCTTTACACTGATGGCCAACTAGGCCATCTTC  100

seq1  TGATACATACGCAGCTAGAGACACGAGCTCCGG----------GGGTACT  93
      |||| |||| ||||||||||||| |||||| ||          |||||||
seq2  TGATTCATATGCAGCTAGAGACATGAGCTCAGGGGTGGGGGGTGGGTACT  150

seq1  GGTCAGTTCATAATGTTGTTCCACCTATAGGGTTGCAGACCCCTTTAGCT  143
      ||| |||||||| ||||||||||||||||||  |||||| ||||||||||
seq2  GGTTAGTTCATATTGTTGTTCCACCTATAGGACTGCAGATCCCTTTAGCT  200

seq1  CCTTGGGTACTTTCTCTAACTCCTCCATTGGGGACCCTGTGATCCTATCC  193
      ||||||||||||||||||  ||||||||||||| ||||||||||| ||||
seq2  CCTTGGGTACTTTCTCTAGGTCCTCCATTGGGGGCCCTGTGATCC-ATCC  249

seq1  AATAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAG  231
      ||||| ||||||||||||||||||||||||||||||||
seq2  AATAGTTGACTGTGAGCATCCACTTCTGTGTTTGCTAG  287