BAC Information

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BAC

Clone NameB6Ng01-163B05
Chromosome12 (Build37)
Map Location 60,680,276 - 60,786,651
singlet/doubletdoublet
Overlap geneLOC665644
Upstream geneLOC100040183, Sec23a, Sip1, Trappc6b, Pnn, EG544872, Mia2, Mgea6, Fbxo33, LOC665628, LOC238199, LOC665639
Downstream geneEG622488, LOC665665, Ppia-ps12_475.1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-163B05.bB6Ng01-163B05.g
ACCDH955753DH955754
length1,1391,034
definitionDH955753|Mus musculus domesticus DNA, BAC clone: B6Ng01-163B05, 5' end.DH955754|Mus musculus domesticus DNA, BAC clone: B6Ng01-163B05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,785,510 - 60,786,651)(60,680,276 - 60,681,338)
sequence
gaattccaagttaacttatattgcatgtcaacccaagccttggaagcttt
gaaagtttaccagacctttcaaagcaatttaaaattaattcaaggacaag
tcagcacagagggccaaagcttggcctggttagctacttgatgatttctc
aacaatgaaaaggcaaggtgagggtgtccataatctgttcagggcagagc
tgtctgtaatgtaatgtaataaatgaagtagggatctggagcttccggtg
aacatttctattttaacaattttagtccccctgttaaaaaagacaacaaa
ttatttatatctttatgaaagcttttcaagaaaaaccttatggaaaattg
taattgtatatatagttgcctactgtgatcttcctgaaaccttgttagaa
gcattaaaaagtaaaatttctccaaaaagtccttgcctacttttaagtga
ctacctatgcaaataatttattttccaaaagttatttactcttacaatac
ttgctaaagctcttggaattcagtcacaccattctctctgtggttcacac
cgttggactaacagttgtcacagtgaaggaatgtctaaataaaatgtcat
aaagttactaagcacttaatagtttgccaggtatatttatatattttgca
gtacaacagttgttttagaatttaacactccaatttacaactggaaaata
ttgagtagtatttctaggaccagagtaatattctggccagacaaaaccaa
ggttttctttggaagttactaagtacttctaacttggtcttcaatgaatt
ccagaagtaaatgcctggtgaacatcagacacccaagaactagattgcaa
tgcccctgttcagtcaccttccaaccacagcttgcagtctcaataaactt
ggacccccctgagatctctcaaatattggattaccaacaaggcagcataa
ccagctgatatgaggtccccacacacatagagtagaggactacctggttt
tgtgttcactcagagatgatggacctaccctcagatactggagcctccag
ggagtttagagtcagttggagtggggagtagggacatccacatgagaaaa
ggggttgggaagaaggtatgggtatgtggtacagttgaa
gaattcactttgttgaccaggctggcctcgaactcagaaatccgtctgct
tctgcctcccaagtgctgagattaaaggcatgcgccaccatgcctggctt
tagtattcttaatcactatttattgcccatctctgttatttattgcccat
ctctgtttgtgacctaacatccttgtgactaatattggaatctacaacca
gagccccaccttctaccaaccaaaatgcaaaaggcagcatccccaaggca
cagagcagaggttttcttattgtgctataacccaccaacctaatatttcc
aatgtgtttagaaagtgatttggtttatggctttcttctgttattacaag
actcatgaatttattattttattggaacatagaatttgggataacctgaa
tctgtcttcccaggctctgatcactcatatttgaggctccagaacaaaat
tcttagtctcatcccctttgaagtgagagttgcgtttcttgcattgacga
caggaaccctagaagcattgctgtttatgtgaataaatttgaagagacct
tgtgggaatgtcgcaatcaaaattctgttatatgaatgaggaacaacatt
caagcaacttctccttttgaatccacttcacgggggattttcctcctatc
tgaaggcttgccacatcagtgcacaacagcacaaaagctctcacacagct
caagagttgaattcagagtgaacaaccttttgtataaattcattgcgatt
tattaggctttgaagctatctcacaggtttttacatttcaactggatttt
cttagtaatttggtttatgttacatttggttatctgtcaggctaacgaat
aatattacctgcctcattctaacctttattgcattgatagtataatacag
gattgcagctggtatggctgtattaatagattctaaaggtcttgcagcac
actgatatttttttcaggattgtgagatctcataatcttaagatgaccgt
gggtggactatagagaatttaagaccccacgccg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_60785510_60786651
seq2: B6Ng01-163B05.b_47_1185 (reverse)

seq1  TTCAACTGTCCCACAT-CCCATACCTTCTTCCCAACCCCCTTTCTCCATG  49
      ||||||||| |||||| |||||||||||||||||||||| ||||| ||||
seq2  TTCAACTGTACCACATACCCATACCTTCTTCCCAACCCCTTTTCT-CATG  49

seq1  TGGATGTCCCTACTCCCCACTCCACCTGACCTCTAAACTCCCTGGGGGCT  99
      |||||||||||||||||||||||| |||| ||||||||||||||| ||||
seq2  TGGATGTCCCTACTCCCCACTCCAACTGA-CTCTAAACTCCCTGGAGGCT  98

seq1  CCAGTATCTTGAGGGTTAGGTCCATCATCTCTGAGTGAACAC-AGACCAG  148
      |||||||| |||||| |||||||||||||||||||||||||| | |||||
seq2  CCAGTATC-TGAGGG-TAGGTCCATCATCTCTGAGTGAACACAAAACCAG  146

seq1  GTAGTCCTCTACTCTATGTGTGTTGGGGACCTCATATCAGCTGGTTATGC  198
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GTAGTCCTCTACTCTATGTGTG-TGGGGACCTCATATCAGCTGGTTATGC  195

seq1  TGCCTTGTTGGTAATCCAATATTTGAGAGATCTCAGGGGGGTCCAAGTTT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTGTTGGTAATCCAATATTTGAGAGATCTCAGGGGGGTCCAAGTTT  245

seq1  ATTGAGACTGCAAGCTGTGGTTGGAAGGTGACTGAACAGGGGCATTGCAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGACTGCAAGCTGTGGTTGGAAGGTGACTGAACAGGGGCATTGCAA  295

seq1  TCTAGTTCTTGGGTGTCTGATGTTCACCAGGCATTTACTTCTGGAATTCA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTTCTTGGGTGTCTGATGTTCACCAGGCATTTACTTCTGGAATTCA  345

seq1  TTGAAGACCAAGTTAGAAGTACTTAGTAACTTCCAAAGAAAACCTTGGTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGACCAAGTTAGAAGTACTTAGTAACTTCCAAAGAAAACCTTGGTT  395

seq1  TTGTCTGGCCAGAATATTACTCTGGTCCTAGAAATACTACTCAATATTTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTGGCCAGAATATTACTCTGGTCCTAGAAATACTACTCAATATTTT  445

seq1  CCAGTTGTAAATTGGAGTGTTAAATTCTAAAACAACTGTTGTACTGCAAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTGTAAATTGGAGTGTTAAATTCTAAAACAACTGTTGTACTGCAAA  495

seq1  ATATATAAATATACCTGGCAAACTATTAAGTGCTTAGTAACTTTATGACA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATAAATATACCTGGCAAACTATTAAGTGCTTAGTAACTTTATGACA  545

seq1  TTTTATTTAGACATTCCTTCACTGTGACAACTGTTAGTCCAACGGTGTGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTAGACATTCCTTCACTGTGACAACTGTTAGTCCAACGGTGTGA  595

seq1  ACCACAGAGAGAATGGTGTGACTGAATTCCAAGAGCTTTAGCAAGTATTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAGAGAGAATGGTGTGACTGAATTCCAAGAGCTTTAGCAAGTATTG  645

seq1  TAAGAGTAAATAACTTTTGGAAAATAAATTATTTGCATAGGTAGTCACTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGTAAATAACTTTTGGAAAATAAATTATTTGCATAGGTAGTCACTT  695

seq1  AAAAGTAGGCAAGGACTTTTTGGAGAAATTTTACTTTTTAATGCTTCTAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTAGGCAAGGACTTTTTGGAGAAATTTTACTTTTTAATGCTTCTAA  745

seq1  CAAGGTTTCAGGAAGATCACAGTAGGCAACTATATATACAATTACAATTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTTTCAGGAAGATCACAGTAGGCAACTATATATACAATTACAATTT  795

seq1  TCCATAAGGTTTTTCTTGAAAAGCTTTCATAAAGATATAAATAATTTGTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATAAGGTTTTTCTTGAAAAGCTTTCATAAAGATATAAATAATTTGTT  845

seq1  GTCTTTTTTAACAGGGGGACTAAAATTGTTAAAATAGAAATGTTCACCGG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTTTTAACAGGGGGACTAAAATTGTTAAAATAGAAATGTTCACCGG  895

seq1  AAGCTCCAGATCCCTACTTCATTTATTACATTACATTACAGACAGCTCTG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCCAGATCCCTACTTCATTTATTACATTACATTACAGACAGCTCTG  945

seq1  CCCTGAACAGATTATGGACACCCTCACCTTGCCTTTTCATTGTTGAGAAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAACAGATTATGGACACCCTCACCTTGCCTTTTCATTGTTGAGAAA  995

seq1  TCATCAAGTAGCTAACCAGGCCAAGCTTTGGCCCTCTGTGCTGACTTGTC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCAAGTAGCTAACCAGGCCAAGCTTTGGCCCTCTGTGCTGACTTGTC  1045

seq1  CTTGAATTAATTTTAAATTGCTTTGAAAGGTCTGGTAAACTTTCAAAGCT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAATTAATTTTAAATTGCTTTGAAAGGTCTGGTAAACTTTCAAAGCT  1095

seq1  TCCAAGGCTTGGGTTGACATGCAATATAAGTTAACTTGGAATTC  1142
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGGCTTGGGTTGACATGCAATATAAGTTAACTTGGAATTC  1139

seq1: chr12_60680276_60681338
seq2: B6Ng01-163B05.g_70_1102

seq1  AATTCACTTTGTTGACCAGGCTGGCCTCGAACTCAGAAATCCGTCTGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCACTTTGTTGACCAGGCTGGCCTCGAACTCAGAAATCCGTCTGCTT  50

seq1  CTGCCTCCCAAGTGCTGAGATTAAAGGCATGCGCCACCATGCCTGGCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCCCAAGTGCTGAGATTAAAGGCATGCGCCACCATGCCTGGCTTT  100

seq1  AGTATTCTTAATCACTATTTATTGCCCATCTCTGTTATTTATTGCCCATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTCTTAATCACTATTTATTGCCCATCTCTGTTATTTATTGCCCATC  150

seq1  TCTGTTTGTGACCTAACATCCTTGTGACTAATATTGGAATCTACAACCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTGTGACCTAACATCCTTGTGACTAATATTGGAATCTACAACCAG  200

seq1  AGCCCCACCTTCTACCAACCAAAATGCAAAAGGCAGCATCCCCAAGGCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCACCTTCTACCAACCAAAATGCAAAAGGCAGCATCCCCAAGGCAC  250

seq1  AGAGCAGAGGTTTTCTTATTGTGCTATAACCCACCAACCTAATATTTCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAGAGGTTTTCTTATTGTGCTATAACCCACCAACCTAATATTTCCA  300

seq1  ATGTGTTTAGAAAGTGATTTGGTTTATGGCTTTCTTCTGTTATTACAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTTTAGAAAGTGATTTGGTTTATGGCTTTCTTCTGTTATTACAAGA  350

seq1  CTCATGAATTTATTATTTTATTGGAACATAGAATTTGGGATAACCTGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGAATTTATTATTTTATTGGAACATAGAATTTGGGATAACCTGAAT  400

seq1  CTGTCTTCCCAGGCTCTGATCACTCATATTTGAGGCTCCAGAACAAAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTTCCCAGGCTCTGATCACTCATATTTGAGGCTCCAGAACAAAATT  450

seq1  CTTAGTCTCATCCCCTTTGAAGTGAGAGTTGCGTTTCTTGCATTGACGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTCTCATCCCCTTTGAAGTGAGAGTTGCGTTTCTTGCATTGACGAC  500

seq1  AGGAACCCTAGAAGCATTGCTGTTTATGTGAATAAATTTGAAGAGACCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACCCTAGAAGCATTGCTGTTTATGTGAATAAATTTGAAGAGACCTT  550

seq1  GTGGGAATGTCGCAATCAAAATTCTGTTATATGAATGAGGAACAACATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGAATGTCGCAATCAAAATTCTGTTATATGAATGAGGAACAACATTC  600

seq1  AAGCAACTTCTCCTTTTGAATCCACTTCACGGGGGATTTTCCTCCTATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAACTTCTCCTTTTGAATCCACTTCACGGGGGATTTTCCTCCTATCT  650

seq1  GAAGGCTTGCCACATCAGTGCACAACAGCACAAAAGCTCTCACACAGCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCTTGCCACATCAGTGCACAACAGCACAAAAGCTCTCACACAGCTC  700

seq1  AAGAGTTGAATTCAGAGTGAACAACCTTTTGTATAAATTCATTGCGATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTTGAATTCAGAGTGAACAACCTTTTGTATAAATTCATTGCGATTT  750

seq1  ATTAGGCTTTGAAGCTATCTCACAGGTTTTTACATTTCAAACTGGATTTT  800
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ATTAGGCTTTGAAGCTATCTCACAGGTTTTTACATTTC-AACTGGATTTT  799

seq1  CTTAGTAATTTGGTTTATGTTACATTTGGTTATCTGTCAGGCTAACGAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTAATTTGGTTTATGTTACATTTGGTTATCTGTCAGGCTAACGAAT  849

seq1  AATATTACCTGCCTCATTCTAACCTTTATTGCATTGATAGGTATTAATAC  900
      ||||||||||||||||||||||||||||||||||||||| ||| ||||||
seq2  AATATTACCTGCCTCATTCTAACCTTTATTGCATTGATA-GTA-TAATAC  897

seq1  AGGATTGCAGCTGGTATTGCCTGTATTTAAATTAGATTTCTAAAGGGTCT  950
      |||||||||||||||| || |||||||   | |||| ||||||| |||||
seq2  AGGATTGCAGCTGGTA-TGGCTGTATT---AATAGA-TTCTAAA-GGTCT  941

seq1  TGCAAGCAACCACTGAATTATTTTTTTTCAAGAATTGTTGAGATACTCAT  1000
      ||| ||||  ||||||  |||||||||   || |||| |||||| |||||
seq2  TGC-AGCA--CACTGA--TATTTTTTT--CAGGATTG-TGAGAT-CTCAT  982

seq1  TAAATCCTTTAAAGAATGAACAGTTGGGTGAACTATAGAGAATATTTAAA  1050
        ||||  ||||   |||| |   |||||| |||||||||||   || ||
seq2  --AATC--TTAA--GATGACC--GTGGGTGGACTATAGAGAA---TTTAA  1021

seq1  GACCCCACAGCCG  1063
      |||||||| ||||
seq2  GACCCCAC-GCCG  1033