BAC Information

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BAC

Clone NameB6Ng01-164C13
Chromosome12 (Build37)
Map Location 43,646,434 - 43,647,561
singlet/doubletsinglet
Overlap genenone
Upstream geneImmp2l, EG638533
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164C13.bB6Ng01-164C13.g
ACCDH956559DH956560
length2811,144
definitionDH956559|Mus musculus domesticus DNA, BAC clone: B6Ng01-164C13, 5' end.DH956560|Mus musculus domesticus DNA, BAC clone: B6Ng01-164C13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcagggggtcttatccacaaagagctacaaatgattaaggactg
cagagggaaggagagttattcttccccagggatgagtctcctaactcatt
atccagtaccagctgattagacctaaaaatatgtacatgtcagtaaaact
ggacagatccagcaggtgtatttatatattcactcattcgtgtgtgtgta
aatgtaacaatgattaaggagcaagaggtcatgaatttgagcatttgtag
aatggggcagttggggggggggagaattgga

gaattctgggtcgctggaggaagaagagacacatgcgaaggagggagagt
tctccatgctttggagagagaagaaccaaggagtgggactgtgtccacta
ctacaagcaggtggtcaaggatgtctagcaggcactaggtatatcttagc
aactagagttatcttttccaggtgggagaaggcaagttgaaaatgaaaaa
ccgtgtgtgtctcttttatctctgtattcaaggaaagcagggtatgagct
gttagcatggcccattcccagagcttagacaaggtaataaaaacatatac
acaacagacaatggctacacttagaatacaaaagtgatggataaacagcc
aggcacaaataagtaatctgaaagaagagaagcctttttagataacaaaa
ccaaaagtgtttaagtgattaaagcttcaaatgaccttccacaagccatg
agtacatcaaagaggatgaagttctaagccaattgttattgttgttgttg
ttttaaatgaaaaaggcagcattttatttttattaaaaatgatgactctg
ttcatcctaaatatttagatcacaatcatgtcatcttatcgtttcctata
ttctacccacctcctgatgcatgcaactccatgccttcattctctttctt
tataaaacaaatagacaaattaaaaacaaacaaacaaaaacagaattaga
ataacaaaaaatttacaaagaaaatgcctaagaacatatatacacataaa
attcataaaaacaaaataaaaaactaatatacataccaaaaattaaaaaa
atgttcaaagaaaggaaaatgagagcaaaatatagacaaaaatgccactg
agtttgttttgtgttgcccagctattgccagacatgtgcctacctttata
tatggttatatacacaggaaagtccatgggggatttattacatttccttt
tccatttccctcttgctcttagaaactttttgctcttcttctgaattgtc
cctgagcctgaggtagggattaaataaaacttccaattaggatgggagtg
gtccaggatctctcagtcctctaaattgtctagtgtaggtctttattttg
gtcccatctactacaaagatcttctcctggaatgaggctaagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_43646434_43647561
seq2: B6Ng01-164C13.g_89_1210 (reverse)

seq1  TGCTTAGCCATCAT--CA-GAGAAGATACCTTTTGTAGTAGATGGGAAC-  46
      ||||||||| ||||  || ||||||||    |||||||||||||||| | 
seq2  TGCTTAGCC-TCATTCCAGGAGAAGAT---CTTTGTAGTAGATGGGACCA  46

seq1  AAATAAAGACCTACAACTAGACAATGTATAGAGACTGAGAGATCTTGGAA  96
      |||||||||||||| |||||||||| || || |||||||||||| |||| 
seq2  AAATAAAGACCTAC-ACTAGACAATTTAGAG-GACTGAGAGATCCTGGAC  94

seq1  CACT-CCATCCTAAATTGGAAGTTTTTATTTAATCCCTACCTTCAAGGCT  145
      |||| ||||||| ||||||||| |||||||||||||||||||   |||||
seq2  CACTCCCATCCT-AATTGGAAG-TTTTATTTAATCCCTACCT--CAGGCT  140

seq1  CAGGGAACAATTCAGAAGAGAAGCAAAAAGTTTCTAAGAGCAAGAGGGAA  195
      ||||| |||||||||||||  |||||||||||||||||||||||||||||
seq2  CAGGG-ACAATTCAGAAGAAGAGCAAAAAGTTTCTAAGAGCAAGAGGGAA  189

seq1  ATGGAAAAGGAAATGTAATAAATCCCCCATGGACTTTCCTGTGTATATAA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAAAGGAAATGTAATAAATCCCCCATGGACTTTCCTGTGTATATAA  239

seq1  CCATATATAAAGGTAGGCACATGTCTGGCAATAGCTGGGCAACACAAAAC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATATAAAGGTAGGCACATGTCTGGCAATAGCTGGGCAACACAAAAC  289

seq1  AAACTCAGTGGCATTTTTGTCTATATTTTGCTCTCATTTTCCTTTCTTTG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCAGTGGCATTTTTGTCTATATTTTGCTCTCATTTTCCTTTCTTTG  339

seq1  AACATTTTTTTAATTTTTGGTATGTATATTAGTTTTTTATTTTGTTTTTA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTTTTTAATTTTTGGTATGTATATTAGTTTTTTATTTTGTTTTTA  389

seq1  TGAATTTTATGTGTATATATGTTCTTAGGCATTTTCTTTGTAAATTTTTT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTTTATGTGTATATATGTTCTTAGGCATTTTCTTTGTAAATTTTTT  439

seq1  GTTATTCTAATTCTGTTTTTGTTTGTTTGTTTTTAATTTGTCTATTTGTT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTCTAATTCTGTTTTTGTTTGTTTGTTTTTAATTTGTCTATTTGTT  489

seq1  TTATAAAGAAAGAGAATGAAGGCATGGAGTTGCATGCATCAGGAGGTGGG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAAGAAAGAGAATGAAGGCATGGAGTTGCATGCATCAGGAGGTGGG  539

seq1  TAGAATATAGGAAACGATAAGATGACATGATTGTGATCTAAATATTTAGG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATATAGGAAACGATAAGATGACATGATTGTGATCTAAATATTTAGG  589

seq1  ATGAACAGAGTCATCATTTTTAATAAAAATAAAATGCTGCCTTTTTCATT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACAGAGTCATCATTTTTAATAAAAATAAAATGCTGCCTTTTTCATT  639

seq1  TAAAACAACAACAACAATAACAATTGGCTTAGAACTTCATCCTCTTTGAT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACAACAACAACAATAACAATTGGCTTAGAACTTCATCCTCTTTGAT  689

seq1  GTACTCATGGCTTGTGGAAGGTCATTTGAAGCTTTAATCACTTAAACACT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTCATGGCTTGTGGAAGGTCATTTGAAGCTTTAATCACTTAAACACT  739

seq1  TTTGGTTTTGTTATCTAAAAAGGCTTCTCTTCTTTCAGATTACTTATTTG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTTTTGTTATCTAAAAAGGCTTCTCTTCTTTCAGATTACTTATTTG  789

seq1  TGCCTGGCTGTTTATCCATCACTTTTGTATTCTAAGTGTAGCCATTGTCT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGGCTGTTTATCCATCACTTTTGTATTCTAAGTGTAGCCATTGTCT  839

seq1  GTTGTGTATATGTTTTTATTACCTTGTCTAAGCTCTGGGAATGGGCCATG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGTATATGTTTTTATTACCTTGTCTAAGCTCTGGGAATGGGCCATG  889

seq1  CTAACAGCTCATACCCTGCTTTCCTTGAATACAGAGATAAAAGAGACACA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACAGCTCATACCCTGCTTTCCTTGAATACAGAGATAAAAGAGACACA  939

seq1  CACGGTTTTTCATTTTCAACTTGCCTTCTCCCACCTGGAAAAGATAACTC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGTTTTTCATTTTCAACTTGCCTTCTCCCACCTGGAAAAGATAACTC  989

seq1  TAGTTGCTAAGATATACCTAGTGCCTGCTAGACATCCTTGACCACCTGCT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTGCTAAGATATACCTAGTGCCTGCTAGACATCCTTGACCACCTGCT  1039

seq1  TGTAGTAGTGGACACAGTCCCACTCCTTGGTTCTTCTCTCTCCAAAGCAT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTAGTGGACACAGTCCCACTCCTTGGTTCTTCTCTCTCCAAAGCAT  1089

seq1  GGAGAACTCTCCCTCCTTCGCATGTGTCTCTTC  1128
      |||||||||||||||||||||||||||||||||
seq2  GGAGAACTCTCCCTCCTTCGCATGTGTCTCTTC  1122


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