BAC Information

Click to search

BAC

Clone NameB6Ng01-164M01
Chromosome12 (Build37)
Map Location 118,521,787 - 118,522,887
singlet/doubletsinglet
Overlap geneLOC432713
Upstream geneD12Ertd551e, D430020J02Rik, Ncapg2, Rnu7-ps1, Ptprn2, LOC627375
Downstream geneLOC100042461, Rapgef5, A930023M06Rik, Cdca7l, Dnahc11, Sp4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164M01.bB6Ng01-164M01.g
ACCDH956993DH956994
length1,1591,098
definitionDH956993|Mus musculus domesticus DNA, BAC clone: B6Ng01-164M01, 5' end.DH956994|Mus musculus domesticus DNA, BAC clone: B6Ng01-164M01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctaagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagttacaatttcctaaagacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaatcacccttggaaggagttacagagacaaagtttggagctgagatta
aagggtggaccatgtagagactgccttatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgcccacagtcagctaatggatggatcacaggctcccaa
tggatgagctagagaaagtacccaggagctaaagggatctgcaaccctat
aggtggatcaacattatgactacagtacccggagctcttgactctagctg
caaatgtatcaaagaatgctagtcgcatcactgggaaggaggtcatgaca
ccactttatatgccgacaggacgccaggccaaagggagggccagataggg
aaatggggt
gaattccatcccagcttcacctgagtggaggtctcggaagaattcacagg
ctgctgcaggtggctgcgtggagcagtttgtctggcctggactgcacagc
ctgtgacaaagccagtgtgctgtgtgctgtgtgagagctgagtgctaagg
aaagggagtgaggaaaggttgaagaaggaggaaagcgcctccccccaact
ctgaagggtgttgggataggggtgctgtgagctgggggttcagagtagaa
gctctgagtgctatggggggggcagttatgacaaaccatcaggggcacag
ggaggtgggatccactctcagagttttcctccatgtcctgcttttcttga
ggcctccagagccccaggaggtgctggtgcagatccaagtgggtcagaac
tcacagtcagccacccctctttcccttccactaaattctccacagccttc
catggtcaaaccactggagaaatggactaactagggctaaggtttcaagt
ttctcaggccaggttgtggcagtgtatggggacatgcactcagactaaca
gtaggagcaattcataatgcatgggaatagtcaagaatggtgcagtctga
ccaagtcacaagaagctcagcactggacagatccgtcaagtagcccagga
gggcagtgggaaggaccagtatcccatatataccaatcatgtggtttggg
ctgcccacaagggatgtcacattgagcaagttctttctaccatgggtggt
gaccagatcctcagccacagtgggtctttgttggctaatgcatgaatctg
tgatttctgaccactgttataagagcacccaacgttattaagaaaccccc
agttctgggccaaatgaatggtaggcaggctttcaaacacacacacattc
atgaccccctcctatatatatatatatatatagtcatgaagccaggctgg
ctttgaattcctaataatatctctatgcccaagtgctgggatgcatgtat
agatcaccatgactcctaaacaaacagcaactgaactttgcatgcaaagg
gctccctcacaataaggtgaacgggaagtccactgacactcttcctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_118521787_118522887
seq2: B6Ng01-164M01.g_67_1164 (reverse)

seq1  TCAGTAAGA-TGTCAGT-GACTTCCCTGTCACCTTATGTTGAGGGAAGCC  48
      |||| |||| ||||||| ||||||||  |||||||||  |||||| ||||
seq2  TCAGGAAGAGTGTCAGTGGACTTCCCGTTCACCTTATTGTGAGGG-AGCC  49

seq1  CTTTGCATGGCAAAGTCTAGTTTGCTGTTTGTTTTGGAGTCATGGTGATC  98
      |||||||| |||||||  || ||||||||||||| |||||||||||||||
seq2  CTTTGCAT-GCAAAGTTCAG-TTGCTGTTTGTTTAGGAGTCATGGTGATC  97

seq1  TATACATGCAATCCCAGCACTTGGGGCATAGAGATATTATTAGGAATTCA  148
      ||||||||| |||||||||||| |||||||||||||||||||||||||||
seq2  TATACATGC-ATCCCAGCACTT-GGGCATAGAGATATTATTAGGAATTCA  145

seq1  AAGCCAGCCTGGCTTCATGACTATATATATATATATATATAGGAGGGGGT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCAGCCTGGCTTCATGACTATATATATATATATATATAGGAGGGGGT  195

seq1  CATGAATGTGTGTGTGTTTGAAAGCCTGCCTACCATTCATTTGGCCCAGA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAATGTGTGTGTGTTTGAAAGCCTGCCTACCATTCATTTGGCCCAGA  245

seq1  ACTGGGGGTTTCTTAATAACGTTGGGTGCTCTTATAACAGTGGTCAGAAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGGGTTTCTTAATAACGTTGGGTGCTCTTATAACAGTGGTCAGAAA  295

seq1  TCACAGATTCCTGCATTAGCCAACAAAGACCCACTGTGGCTGAGGATCTG  348
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TCACAGATTCATGCATTAGCCAACAAAGACCCACTGTGGCTGAGGATCTG  345

seq1  GTCACCACCCATGGTAGAAAGAACTTGCTCAATGTGACATCCCTTGTGGG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCACCCATGGTAGAAAGAACTTGCTCAATGTGACATCCCTTGTGGG  395

seq1  CAGCCCAAACCACATGATTGGTATATATGGGATACTGGTCCTTCCCACTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCAAACCACATGATTGGTATATATGGGATACTGGTCCTTCCCACTG  445

seq1  CCCTCCTGGGCTACTTGACGGATCTGTCCAGTGCTGAGCTTCTTGTGACT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCTGGGCTACTTGACGGATCTGTCCAGTGCTGAGCTTCTTGTGACT  495

seq1  TGGTCAGACTGCACCATTCTTGACTATTCCCATGCATTATGAATTGCTCC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCAGACTGCACCATTCTTGACTATTCCCATGCATTATGAATTGCTCC  545

seq1  TACTGTTAGTCTGAGTGCATGTCCCCATACACTGCCACAACCTGGCCTGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTTAGTCTGAGTGCATGTCCCCATACACTGCCACAACCTGGCCTGA  595

seq1  GAAACTTGAAACCTTAGCCCTAGTTAGTCCATTTCTCCAGTGGTTTGACC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTTGAAACCTTAGCCCTAGTTAGTCCATTTCTCCAGTGGTTTGACC  645

seq1  ATGGAAGGCTGTGGAGAATTTAGTGGAAGGGAAAGAGGGGTGGCTGACTG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAGGCTGTGGAGAATTTAGTGGAAGGGAAAGAGGGGTGGCTGACTG  695

seq1  TGAGTTCTGACCCACTTGGATCTGCACCAGCACCTCCTGGGGCTCTGGAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTCTGACCCACTTGGATCTGCACCAGCACCTCCTGGGGCTCTGGAG  745

seq1  GCCTCAAGAAAAGCAGGACATGGAGGAAAACTCTGAGAGTGGATCCCACC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAAGAAAAGCAGGACATGGAGGAAAACTCTGAGAGTGGATCCCACC  795

seq1  TCCCTGTGCCCCTGATGGTTTGTCATAACTGCCCCCCCCATAGCACTCAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGTGCCCCTGATGGTTTGTCATAACTGCCCCCCCCATAGCACTCAG  845

seq1  AGCTTCTACTCTGAACCCCCAGCTCACAGCACCCCTATCCCAACACCCTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCTACTCTGAACCCCCAGCTCACAGCACCCCTATCCCAACACCCTT  895

seq1  CAGAGTTGGGGGGAGGCGCTTTCCTCCTTCTTCAACCTTTCCTCACTCCC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTTGGGGGGAGGCGCTTTCCTCCTTCTTCAACCTTTCCTCACTCCC  945

seq1  TTTCCTTAGCACTCAGCTCTCACACAGCACACAGCACACTGGCTTTGTCA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTAGCACTCAGCTCTCACACAGCACACAGCACACTGGCTTTGTCA  995

seq1  CAGGCTGTGCAGTCCAGGCCAGACAAACTGCTCCACGCAGCCACCTGCAG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTGTGCAGTCCAGGCCAGACAAACTGCTCCACGCAGCCACCTGCAG  1045

seq1  CAGCCTGTGAATTCTTCCGAGACCTCCACTCAGGTGAAGCTGGGATGGAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGTGAATTCTTCCGAGACCTCCACTCAGGTGAAGCTGGGATGGAA  1095

seq1  TTC  1101
      |||
seq2  TTC  1098