BAC Information

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BAC

Clone NameB6Ng01-166L09
Chromosome12 (Build37)
Map Location 15,439,815 - 15,597,016
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043256, Map1lc3-ps7, LOC668492, LOC100042426
Downstream geneLOC217409, Trib2, LOC100043268, EG432636, LOC100043273, Lpin1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166L09.bB6Ng01-166L09.g
ACCDH958408DH958409
length1,1671,118
definitionDH958408|Mus musculus domesticus DNA, BAC clone: B6Ng01-166L09, 5' end.DH958409|Mus musculus domesticus DNA, BAC clone: B6Ng01-166L09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,595,838 - 15,597,016)(15,439,815 - 15,440,940)
sequence
gaattcagtatgtagtccatttaagactcaaacttgcagtgattttctga
tcttcctcttctaagtgttatgattgcaggcatagattcccatacccagg
gatttttctactttcaacattatattgtatccagcaaaggtaactacaca
agatgagagagaaaaatttagatggaatccaacagtttaaagcttgtttg
atgctctagttagacgaacactaagaccacttcacaggtggaacagaatg
gaagcaaaggaagttgaaaaataaagcagagtacagtaggttaaacttat
gggttcccattaaatcacccaactgcctgtaggtaagtgatattattata
attaaaaaatgcaaagagcagttatggaatttgcccatctttggatggtt
cagtgcagtagagtgaaagtttttatccaagcctctcagactaaaaagcc
atggaactttcttgtttgctctccaaaaattgtgagaaggaggattgtca
gtcacttcagaggtccaagatatgatggtcattcatgatagttcttcaag
accagtgatcatgtggttttaatgtgagatgccagcttggtttgcacaaa
atgaaattattcatagtctcatcaatggagaatgtagatttgattcttct
tgatccaacaggactcaattcaatataagacaaaattacttttcaagcat
catttatataggcaattattttctgagactctgctgaagctacagaggta
catgtctgtattgtgcctttcagaatctcttgggtagctagaaatacaat
taacagccacagaatagttcacaggcaatttcacattagcctgatagctg
atgacagcagcggacaactttaaatcagatctctaaaggccctggataca
tgccttaacccccctctacctcaatagctgtggaggattctctcatgtat
aaaatgtggatttaaaaattcctcaggagattagtttcagatcaaagaca
tgttgcatatgggccattttgatgcatgtgacttagagctgagctatgct
agagatgaaattcaatggcgagctttcctccctccctcaagaatgatttc
actccatctgtctccagaaaataaaaagagctgtaacttgattctgacgt
cctagccaagtgaggcg
gaattctctaataagatcacagacattactgataactgtgaggtctcttc
agttagggcagaaaaagaaaggaagaggcttcacacagggctattttcag
aactcgttgccaaaaagctaaaagaaaagtaaatatataggatttaaaga
aaagtaaatgtataggattggccagtttgttgttctgtatatcttggatg
gacaattatagagctgatcgtgaatcctcgtgttctgtgactgggggatg
tctaagagagttccattatagcagatgaagcaaatgcacaccccgtaaag
gtgttcacaggtattcaaaaatggggtttgatgaaaaacaacaagaacaa
cagaaaaatacttaaaatataatttttgtgtgtctcagttttttctaaac
ctcccacaccagtgatgactcaatagttgcagagatcttttctctgacaa
accaacatctagatatttccattagggtgtaaaggaaccagaaatgtgac
accaaggctgggctcccaattagaggccctgagcagtctgaagaggcctg
tctattgctgtgccctgaagtcctgaatccattctaaggacatacttgta
agcccttctaaacgctcttgtttctacagatagagttcttgcccacaaga
ggcacttactccactcctttttagagcttccctacaagctaaccttcaca
cctgctctactccgaaagcctgcccagtggagtttcagttactatatttg
cttcactatttctttttccacttggatcagtaattaggtaaaagttagat
catgtgccactcatgtcattccacttaattctttttaatattttggttat
tcatttgttgtctgtttactttatctaagcgtatccactgtttccccttg
tgtggctagaattcccaccaggtccttatttatattttcctctgaagggc
tctcttcctctttttttttttccattgtgatcatcattccttacatctct
gtgaactcctataacatctgtttcatctttggaattgtttctttcactgc
ctttcttttaatttgataatcacaccaagggtacactgccaccacctgcc
tgatacaatcctgggttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_15595838_15597016
seq2: B6Ng01-166L09.b_46_1212 (reverse)

seq1  CGCCTCACTTTGCCTTGGGGCGTCAGAAATCAAGGTTACAGCTCTTTTTA  50
      |||||||||| ||  | || |||||| |||||| ||||||||||||||||
seq2  CGCCTCACTTGGC--TAGGACGTCAG-AATCAA-GTTACAGCTCTTTTTA  46

seq1  TTTTCTGGAGACAGAT-GAGTGAAAATCA-TCTTGAGG--AGGAGGAAAA  96
      |||||||||||||||| ||||| |||||| ||||||||   |||||||| 
seq2  TTTTCTGGAGACAGATGGAGTG-AAATCATTCTTGAGGGAGGGAGGAAA-  94

seq1  GGCCTTCG-CATTGAATTTCATCCTCTAGCATAGCTCAAGCTCTAAGGTT  145
       ||  ||| ||||||||||||| |||||||||||||| |||||||||  |
seq2  -GC--TCGCCATTGAATTTCAT-CTCTAGCATAGCTC-AGCTCTAAG--T  137

seq1  CACATGCAATCAAAATGGCCCCTTATGGCAACAATGTCTTTGATCCTGAA  195
      ||||||| |||||||||| ||| ||| ||||| ||||||||||| |||||
seq2  CACATGC-ATCAAAATGG-CCCATAT-GCAAC-ATGTCTTTGAT-CTGAA  182

seq1  ACTAATCTCCTGAGGAATTTTTAAATCCACATTTTATACATGAGAGAATC  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATCTCCTGAGGAATTTTTAAATCCACATTTTATACATGAGAGAATC  232

seq1  CTCCACAGCTATTGAGGTAGAGGGGGGTTAAGGCATGTATCCAGGGCC-T  294
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CTCCACAGCTATTGAGGTAGAGGGGGGTTAAGGCATGTATCCAGGGCCTT  282

seq1  TAGAGATCTGATTTAAAGTTGTCCGCTGCTGTCATCAGCTATCAGGCTAA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGATCTGATTTAAAGTTGTCCGCTGCTGTCATCAGCTATCAGGCTAA  332

seq1  TGTGAAATTGCCTGTGAACTATTCTGTGGCTGTTAATTGTATTTCTAGCT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAATTGCCTGTGAACTATTCTGTGGCTGTTAATTGTATTTCTAGCT  382

seq1  ACCCAAGAGATTCTGAAAGGCACAATACAGACATGTACCTCTGTAGCTTC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAGAGATTCTGAAAGGCACAATACAGACATGTACCTCTGTAGCTTC  432

seq1  AGCAGAGTCTCAGAAAATAATTGCCTATATAAATGATGCTTGAAAAGTAA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAGTCTCAGAAAATAATTGCCTATATAAATGATGCTTGAAAAGTAA  482

seq1  TTTTGTCTTATATTGAATTGAGTCCTGTTGGATCAAGAAGAATCAAATCT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCTTATATTGAATTGAGTCCTGTTGGATCAAGAAGAATCAAATCT  532

seq1  ACATTCTCCATTGATGAGACTATGAATAATTTCATTTTGTGCAAACCAAG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCTCCATTGATGAGACTATGAATAATTTCATTTTGTGCAAACCAAG  582

seq1  CTGGCATCTCACATTAAAACCACATGATCACTGGTCTTGAAGAACTATCA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCATCTCACATTAAAACCACATGATCACTGGTCTTGAAGAACTATCA  632

seq1  TGAATGACCATCATATCTTGGACCTCTGAAGTGACTGACAATCCTCCTTC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGACCATCATATCTTGGACCTCTGAAGTGACTGACAATCCTCCTTC  682

seq1  TCACAATTTTTGGAGAGCAAACAAGAAAGTTCCATGGCTTTTTAGTCTGA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAATTTTTGGAGAGCAAACAAGAAAGTTCCATGGCTTTTTAGTCTGA  732

seq1  GAGGCTTGGATAAAAACTTTCACTCTACTGCACTGAACCATCCAAAGATG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTTGGATAAAAACTTTCACTCTACTGCACTGAACCATCCAAAGATG  782

seq1  GGCAAATTCCATAACTGCTCTTTGCATTTTTTAATTATAATAATATCACT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAATTCCATAACTGCTCTTTGCATTTTTTAATTATAATAATATCACT  832

seq1  TACCTACAGGCAGTTGGGTGATTTAATGGGAACCCATAAGTTTAACCTAC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTACAGGCAGTTGGGTGATTTAATGGGAACCCATAAGTTTAACCTAC  882

seq1  TGTACTCTGCTTTATTTTTCAACTTCCTTTGCTTCCATTCTGTTCCACCT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTCTGCTTTATTTTTCAACTTCCTTTGCTTCCATTCTGTTCCACCT  932

seq1  GTGAAGTGGTCTTAGTGTTCGTCTAACTAGAGCATCAAACAAGCTTTAAA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGTGGTCTTAGTGTTCGTCTAACTAGAGCATCAAACAAGCTTTAAA  982

seq1  CTGTTGGATTCCATCTAAATTTTTCTCTCTCATCTTGTGTAGTTACCTTT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGGATTCCATCTAAATTTTTCTCTCTCATCTTGTGTAGTTACCTTT  1032

seq1  GCTGGATACAATATAATGTTGAAAGTAGAAAAATCCCTGGGTATGGGAAT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGATACAATATAATGTTGAAAGTAGAAAAATCCCTGGGTATGGGAAT  1082

seq1  CTATGCCTGCAATCATAACACTTAGAAGAGGAAGATCAGAAAATCACTGC  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGCCTGCAATCATAACACTTAGAAGAGGAAGATCAGAAAATCACTGC  1132

seq1  AAGTTTGAGTCTTAAATGGACTACATACTGAATTC  1179
      |||||||||||||||||||||||||||||||||||
seq2  AAGTTTGAGTCTTAAATGGACTACATACTGAATTC  1167

seq1: chr12_15439815_15440940
seq2: B6Ng01-166L09.g_68_1185

seq1  GAATTCTCTAATAAGATCACAGACATTACTGATAACTGTGAGGTCTCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTAATAAGATCACAGACATTACTGATAACTGTGAGGTCTCTTC  50

seq1  AGTTAGGGCAGAAAAAGAAAGGAAGAGGCTTCACACAGGGCTATTTTCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGGGCAGAAAAAGAAAGGAAGAGGCTTCACACAGGGCTATTTTCAG  100

seq1  AACTCGTTGCCAAAAAGCTAAAAGAAAAGTAAATATATAGGATTTAAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCGTTGCCAAAAAGCTAAAAGAAAAGTAAATATATAGGATTTAAAGA  150

seq1  AAAGTAAATGTATAGGATTGGCCAGTTTGTTGTTCTGTATATCTTGGATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAAATGTATAGGATTGGCCAGTTTGTTGTTCTGTATATCTTGGATG  200

seq1  GACAATTATAGAGCTGATCGTGAATCCTCGTGTTCTGTGACTGGGGGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATTATAGAGCTGATCGTGAATCCTCGTGTTCTGTGACTGGGGGATG  250

seq1  TCTAAGAGAGTTCCATTATAGCAGATGAAGCAAATGCACACCCCGTAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGAGAGTTCCATTATAGCAGATGAAGCAAATGCACACCCCGTAAAG  300

seq1  GTGTTCACAGGTATTCAAAAATGGGGTTTGATGAAAAACAACAAGAACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCACAGGTATTCAAAAATGGGGTTTGATGAAAAACAACAAGAACAA  350

seq1  CAGAAAAATACTTAAAATATAATTTTTGTGTGTCTCAGTTTTTTCTAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAAATACTTAAAATATAATTTTTGTGTGTCTCAGTTTTTTCTAAAC  400

seq1  CTCCCACACCAGTGATGACTCAATAGTTGCAGAGATCTTTTCTCTGACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCACACCAGTGATGACTCAATAGTTGCAGAGATCTTTTCTCTGACAA  450

seq1  ACCAACATCTAGATATTTCCATTAGGGTGTAAAGGAACCAGAAATGTGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACATCTAGATATTTCCATTAGGGTGTAAAGGAACCAGAAATGTGAC  500

seq1  ACCAAGGCTGGGCTCCCAATTAGAGGCCCTGAGCAGTCTGAAGAGGCCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGGCTGGGCTCCCAATTAGAGGCCCTGAGCAGTCTGAAGAGGCCTG  550

seq1  TCTATTGCTGTGCCCTGAAGTCCTGAATCCATTCTAAGGACATACTTGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTGCTGTGCCCTGAAGTCCTGAATCCATTCTAAGGACATACTTGTA  600

seq1  AGCCCTTCTAAACGCTCTTGTTTCTACAGATAGAGTTCTTGCCCACAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTTCTAAACGCTCTTGTTTCTACAGATAGAGTTCTTGCCCACAAGA  650

seq1  GGCACTTACTCCACTCCTTTTTAGAGCTTCCCTACAAGCTAACCTTCACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTTACTCCACTCCTTTTTAGAGCTTCCCTACAAGCTAACCTTCACA  700

seq1  CCTGCTCTACTCCGAAAGCCTGCCCAGTGGAGTTTCAGTTACTATATTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTCTACTCCGAAAGCCTGCCCAGTGGAGTTTCAGTTACTATATTTG  750

seq1  CTTCACTATTTCTTTTTCCACTTGGATCAGTAATTAGGTAAAAGTTAGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACTATTTCTTTTTCCACTTGGATCAGTAATTAGGTAAAAGTTAGAT  800

seq1  CATGTGCCACTCATGTCATTCCACTTAATTCTTTTTAATATTTTGGTTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGCCACTCATGTCATTCCACTTAATTCTTTTTAATATTTTGGTTAT  850

seq1  TCATTTGTTGTCTGTTTACTTTATCTAAGCGTATCCACTGTTTCCCCTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTGTTGTCTGTTTACTTTATCTAAGCGTATCCACTGTTTCCCCTTG  900

seq1  TGTGGCTAGAATTCCCACCAGGTCCTTATTTTATAATTTTCCTCTGAAAG  950
      |||||||||||||||||||||||||||| ||||| ||||||||||| |||
seq2  TGTGGCTAGAATTCCCACCAGGTCCTTA-TTTAT-ATTTTCCTCTG-AAG  947

seq1  GGCTCTCTTCCTCTTTTTTTTTTTTCCCATTGTGATCCATCATTCCTTAC  1000
      ||||||||||||||||||||||||  |||||||||| |||||||||||||
seq2  GGCTCTCTTCCTCTTTTTTTTTTT--CCATTGTGAT-CATCATTCCTTAC  994

seq1  ATCTCTGTTGAACTCCTATAACATCTGTTTCATCTTTGGATATGTTTTCT  1050
      ||||||| ||||||||||||||||||||||||||||||||  |||||  |
seq2  ATCTCTG-TGAACTCCTATAACATCTGTTTCATCTTTGGAATTGTTTCTT  1043

seq1  TCACTGCCTTTCTCTTTATTTTGTATAATCACAACCAGGGTACACTG-CA  1099
      ||||||||||||| |||| |||| ||||||||| | ||||||||||| ||
seq2  TCACTGCCTTTCT-TTTAATTTG-ATAATCACACCAAGGGTACACTGCCA  1091

seq1  GCATCTGCCTGATACAATCCTGGGTTT  1126
       || |||||||||||||||||||||||
seq2  CCACCTGCCTGATACAATCCTGGGTTT  1118