BAC Information

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BAC

Clone NameB6Ng01-169P17
Chromosome12 (Build37)
Map Location 107,787,440 - 107,951,014
singlet/doubletdoublet
Overlap genenone
Upstream geneBdkrb2, Bdkrb1, 2410024A21Rik, 4933433P14Rik, Ak7, Papola, Vrk1, LOC100040386, LOC100040404, LOC100040420, 1700121N20Rik, LOC100041191, LOC100040451
Downstream geneLOC673604, LOC100040484, LOC382635, LOC100041251, LOC100040497, LOC668151
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-169P17.bB6Ng01-169P17.g
ACCDH960812DH960813
length510612
definitionDH960812|Mus musculus domesticus DNA, BAC clone: B6Ng01-169P17, 5' end.DH960813|Mus musculus domesticus DNA, BAC clone: B6Ng01-169P17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(107,787,440 - 107,787,955)(107,950,402 - 107,951,014)
sequence
ctgcacaggctatcctctgccttttacactacccccccccatggcatacg
ccctaaataaaataaacgtaaaagaaatacataaacatctctcatgtgat
gatttaccaggtcacagcattccattctccatagaaatgaatgtcagtta
agcaacccagtgtctcagtttggagggaatgggaccatggctcagtccaa
cctaggaatttttggcccctggtcccaagctttgtacgagcagatgggtg
tctcccagagacacccccccccccccagtcaatgcagtgtgcatgaagaa
gggcttcatgatgacagtgcatagatagaaatgatgacagtggtgtgtgc
agcactctgagcaccgggttgatggcacaccgtcctcacccggcttctgc
cctgatgccgggaacatgactttagaagtgcacttctctgaggaacaagg
ccccaagggtctttcagatgcactaagggaaatatcaccatcacagtcat
ttggcaaact
gaattcactaagagatgaagattagctgaactgattctgtctatggatat
tttctcatgtgaaagccacctgaggggctcgctgcatacccagggcactg
ggaggttgattagcatgttgtcccccatccccctccaaggcagaggtcac
acaagcttctccctccaggtcccttcaagcccactggtaagcagtgctga
gtgctgttcgtgactctgggttcagtggaggctaggtgacaggagccctc
ttgggatagttgcaggggctgtctgaaaatcctcaggatgtttccaggct
gtttatatgatcatagagtcaatgtttatggatggggtgagtatgacctc
attgccaagttctgatgcaaagaacaacgccagaagaatcaggcagagat
accacatagatccacatctgctaagatttagggggaaaggggtaatctat
agtttatagaaggactaaccagcatttatgctccatagggaccagaaatg
tacaaacacttctctctcatctcgtgaaatgggaacagttcttatttccc
agattctcagatgagaaaacaggtccagagtggttaggtggtcaggaagt
cacacttggatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_107787440_107787955
seq2: B6Ng01-169P17.b_47_562

seq1  GAATTCCTGCACAGGCTATCCTCTGCCTTTTACACTACCCCCCCCCATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGCACAGGCTATCCTCTGCCTTTTACACTACCCCCCCCCATGG  50

seq1  CATACGCCCTAAATAAAATAAACGTAAAAGAAATACATAAACATCTCTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACGCCCTAAATAAAATAAACGTAAAAGAAATACATAAACATCTCTCA  100

seq1  TGTGATGATTTACCAGGTCACAGCATTCCATTCTCCATAGAAATGAATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATGATTTACCAGGTCACAGCATTCCATTCTCCATAGAAATGAATGT  150

seq1  CAGTTAAGCAACCCAGTGTCTCAGTTTGGAGGGAATGGGACCATGGCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTAAGCAACCCAGTGTCTCAGTTTGGAGGGAATGGGACCATGGCTCA  200

seq1  GTCCAACCTAGGAATTTTTGGCCCCTGGTCCCAAGCTTTGTACGAGCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAACCTAGGAATTTTTGGCCCCTGGTCCCAAGCTTTGTACGAGCAGA  250

seq1  TGGGTGTCTCCCAGAGACACCCCCCCCCCCCCAGTCAATGCAGTGTGCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGTCTCCCAGAGACACCCCCCCCCCCCCAGTCAATGCAGTGTGCAT  300

seq1  GAAGAAGGGCTTCATGATGACAGTGCATAGATAGAAATGATGACAGTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGGGCTTCATGATGACAGTGCATAGATAGAAATGATGACAGTGGT  350

seq1  GTGTGCAGCACTCTGAGCACCGGGTTGATGGCACACCGTCCTCACCCGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCAGCACTCTGAGCACCGGGTTGATGGCACACCGTCCTCACCCGGC  400

seq1  TTCTGCCCTGATGCCGGGAACATGACTTTAGAAGTGCACTTCTCTGAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCCCTGATGCCGGGAACATGACTTTAGAAGTGCACTTCTCTGAGGA  450

seq1  ACAAGGCCCCAAGGGTCTTTCAGATGCACTAAGGGAAATATCACCATCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGCCCCAAGGGTCTTTCAGATGCACTAAGGGAAATATCACCATCAC  500

seq1  AGTCATTTGGCAAACT  516
      ||||||||||||||||
seq2  AGTCATTTGGCAAACT  516

seq1: chr12_107950402_107951014
seq2: B6Ng01-169P17.g_69_680 (reverse)

seq1  CCTCCATGTGTGAACTTCCTAACCACCTAACCACTCTGGACCTGTTTTCT  50
      | |||| ||||| ||||||| |||||||||||||||||||||||||||||
seq2  CATCCAAGTGTG-ACTTCCTGACCACCTAACCACTCTGGACCTGTTTTCT  49

seq1  CATCTGGGAATCTGGGAAATAAGAACTGTTCCCATTTCACGAGATGAGAG  100
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGAGAATCTGGGAAATAAGAACTGTTCCCATTTCACGAGATGAGAG  99

seq1  AGAAGTGTTTGTACATTTCTGGTCCCTATGGAGCATAAATGCTGGTTAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTGTTTGTACATTTCTGGTCCCTATGGAGCATAAATGCTGGTTAGT  149

seq1  CCTTCTATAAACTATAGATTACCCCTTTCCCCCTAAATCTTAGCAGATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTATAAACTATAGATTACCCCTTTCCCCCTAAATCTTAGCAGATGT  199

seq1  GGATCTATGTGGTATCTCTGCCTGATTCTTCTGGCGTTGTTCTTTGCATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTATGTGGTATCTCTGCCTGATTCTTCTGGCGTTGTTCTTTGCATC  249

seq1  AGAACTTGGCAATGAGGTCATACTCACCCCATCCATAAACATTGACTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTTGGCAATGAGGTCATACTCACCCCATCCATAAACATTGACTCTA  299

seq1  TGATCATATAAACAGCCTGGAAACATCCTGAGGATTTTCAGACAGCCCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCATATAAACAGCCTGGAAACATCCTGAGGATTTTCAGACAGCCCCT  349

seq1  GCAACTATCCCAAGAGGGCTCCTGTCACCTAGCCTCCACTGAACCCAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTATCCCAAGAGGGCTCCTGTCACCTAGCCTCCACTGAACCCAGAG  399

seq1  TCACGAACAGCACTCAGCACTGCTTACCAGTGGGCTTGAAGGGACCTGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACGAACAGCACTCAGCACTGCTTACCAGTGGGCTTGAAGGGACCTGGA  449

seq1  GGGAGAAGCTTGTGTGACCTCTGCCTTGGAGGGGGATGGGGGACAACATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAAGCTTGTGTGACCTCTGCCTTGGAGGGGGATGGGGGACAACATG  499

seq1  CTAATCAACCTCCCAGTGCCCTGGGTATGCAGCGAGCCCCTCAGGTGGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATCAACCTCCCAGTGCCCTGGGTATGCAGCGAGCCCCTCAGGTGGCT  549

seq1  TTCACATGAGAAAATATCCATAGACAGAATCAGTTCAGCTAATCTTCATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACATGAGAAAATATCCATAGACAGAATCAGTTCAGCTAATCTTCATC  599

seq1  TCTTAGTGAATTC  613
      |||||||||||||
seq2  TCTTAGTGAATTC  612