BAC Information

Click to search

BAC

Clone NameB6Ng01-170E14
Chromosome12 (Build37)
Map Location 12,215,213 - 12,216,310
singlet/doubletsinglet
Overlap genenone
Upstream geneMsgn1, 5830483C08Rik, Smc6, Vsnl1, EG209550, LOC217390, LOC628327, LOC627110, LOC100043209
Downstream geneD12Ertd553e, LOC100043215, Mycn, EG668473, LOC628449
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-170E14.bB6Ng01-170E14.g
ACCDH961037DH961038
length1,1501,094
definitionDH961037|Mus musculus domesticus DNA, BAC clone: B6Ng01-170E14, 5' end.DH961038|Mus musculus domesticus DNA, BAC clone: B6Ng01-170E14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaaacgaggaataccaaatggctgagaagcacttgaaaaaatg
ttaagcatccttaatcatcagggacatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatagctaggatcaaaaatccaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgctggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagaactaccggtagatccagcaatacctctcctgggc
atatacccagaagttgttccaactaataataaggacacatgctccactat
gttcatagcaaccttatttataatagacagaagctggaaagaatccagat
ctccctcaacataggaatggatacataaaatgtgtggtacatgtacacaa
tggagtactactcagctattaaaaacaattaatttatgaaattattgagc
aaatggatgtatctggatgatagcatcctgagtgaggtaacccaatcaca
aaaaaaagtcacttgatatgcactcactgataactggatattagcccaga
aaccttgaatacccaagatacaacttccaaaacacaagaaaatcaagaat
gaagaccaatgtgtggatacttcattcctccctagaatagggaataaaat
atccatgtaaggagttgcagagacaaagtttggagctaagacgaaaggat
ggaccatccagtgactgccccacccaggggtccatcctatggtcagcaac
caaatgcagacactattgcataagccagcaagattttgctgaagggaccc
tgatatagctgtctcctgtgaggctttgccattgcctggcaaatacagaa
gtggatactcacagacatctataggatggaacacagggccccatatagag
ctagagaaagtacccaagaactcaagtgtggaacaacaatatgactaatc
tgtaaccccaatagctcatgtctctagctgcatttgtaagcaaaagatgg
cctaattgggctcatggaagaaaaggtcaattgtctagcaaatctaaatg
ccccggacatgaaccacatcccccagaagtggaatgaatggttagtgtag

gaattctatgactcatgtggctcttactaaaagttagttttctttctgaa
aggtcattagatgactctgttacatacaaggacccatggcttagctcatc
tcagaaaaggactctctcatatgtgccatactacttttgcataacttgat
tggactataaacatcaaggtcttgatagatctgagaccacatgtgagaag
aattgcaggtcagctctcagttggaagagaattaaatgtgagtcctggga
agaatgactaaagggaaaatatatgtgcaccaaatctttacccgcttcag
ttatgagggagcattccacatagcaaaacacgcctgaggaatagatgaga
tgtgaacgtgggttgatggaattgggactcacaacattttcagagaggct
ggtctccatattctctgtgcagtaatcttctagctcttagtgacattagt
ttcacagacccatcaagagagctgggttcattttccatctagaaacacct
tgtctcatttgctcatagattcccatgtctcacaagttccagtgatcaca
agaatatgctgccctcctacctgcagccccaggatagagggggccagcct
gagtgtctgtactttaggtctcccttctcatcagagcctctaggagtcca
gggtttgaatcactgtcctgatgctggtttctctgttgatcacaggcact
ttctgtgtttcttggccaacacttctccatctgatttgaaacttcaaata
aaatcctgtacttgaaagtagaaaatgcattttaaatagaaagatttaat
atagctgtgatgctttccaaccccaggaagaaagttttgttggcttgcta
ttgccgaaatgctggcagtccatgtctcctttctactgagagctgtttct
tgtcatctctgggttgaagtttgcagtcttctctagcatgggtttggtga
ggctatcagaataaagagtatgtgtttggtacttcaaacgaatctcatcc
ctgtcaaccccactaaaatattacatctcaaggcctcacccagaagaaaa
ttcaaccttgcaaaggccttccttgctcataacccagagcacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_12215213_12216310
seq2: B6Ng01-170E14.g_68_1161 (reverse)

seq1  TTGTGCTCTGGTGTTATGAGC-AGGAAGGCATTTTGCAAGATTGGAATTT  49
      ||||||||||| ||||||||| ||||||||  |||||||| ||| | |||
seq2  TTGTGCTCTGG-GTTATGAGCAAGGAAGGC-CTTTGCAAGGTTGAATTTT  48

seq1  CCTCTTGGTGATGGCCTGAGATGTAATATTTTA-TGTGGGTGACAGGGAT  98
      | ||| ||||| | | ||||||||||||||||| || || ||||||||||
seq2  CTTCTGGGTGAGGCCTTGAGATGTAATATTTTAGTGGGGTTGACAGGGAT  98

seq1  GAGATTCGTTTGAAGTGACAAACACATAACTCTTTATTCTGGATAGCCTC  148
      ||||||||||||||||  ||||||||| |||||||||||| |||||||||
seq2  GAGATTCGTTTGAAGTACCAAACACAT-ACTCTTTATTCT-GATAGCCTC  146

seq1  ACCAAACCCATGCTAGAGGAAGAACTGCAAACTTCAACCCAGAGATGACA  198
      ||||||||||||||||| |||| |||||||||||||||||||||||||||
seq2  ACCAAACCCATGCTAGA-GAAG-ACTGCAAACTTCAACCCAGAGATGACA  194

seq1  AGAAACAGCTCTCAGTAGAAAGGAGACATGGACTGCCAGCATTTCGGCAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACAGCTCTCAGTAGAAAGGAGACATGGACTGCCAGCATTTCGGCAA  244

seq1  TAGCAAGCCAACAAAACTTTCTTCCTGGGGTTGGAAAGCATCACAGCTAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAGCCAACAAAACTTTCTTCCTGGGGTTGGAAAGCATCACAGCTAT  294

seq1  ATTAAATCTTTCTATTTAAAATGCATTTTCTACTTTCAAGTACAGGATTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATCTTTCTATTTAAAATGCATTTTCTACTTTCAAGTACAGGATTT  344

seq1  TATTTGAAGTTTCAAATCAGATGGAGAAGTGTTGGCCAAGAAACACAGAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGAAGTTTCAAATCAGATGGAGAAGTGTTGGCCAAGAAACACAGAA  394

seq1  AGTGCCTGTGATCAACAGAGAAACCAGCATCAGGACAGTGATTCAAACCC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCTGTGATCAACAGAGAAACCAGCATCAGGACAGTGATTCAAACCC  444

seq1  TGGACTCCTAGAGGCTCTGATGAGAAGGGAGACCTAAAGTACAGACACTC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTCCTAGAGGCTCTGATGAGAAGGGAGACCTAAAGTACAGACACTC  494

seq1  AGGCTGGCCCCCTCTATCCTGGGGCTGCAGGTAGGAGGGCAGCATATTCT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGGCCCCCTCTATCCTGGGGCTGCAGGTAGGAGGGCAGCATATTCT  544

seq1  TGTGATCACTGGAACTTGTGAGACATGGGAATCTATGAGCAAATGAGACA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATCACTGGAACTTGTGAGACATGGGAATCTATGAGCAAATGAGACA  594

seq1  AGGTGTTTCTAGATGGAAAATGAACCCAGCTCTCTTGATGGGTCTGTGAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTTTCTAGATGGAAAATGAACCCAGCTCTCTTGATGGGTCTGTGAA  644

seq1  ACTAATGTCACTAAGAGCTAGAAGATTACTGCACAGAGAATATGGAGACC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATGTCACTAAGAGCTAGAAGATTACTGCACAGAGAATATGGAGACC  694

seq1  AGCCTCTCTGAAAATGTTGTGAGTCCCAATTCCATCAACCCACGTTCACA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCTCTGAAAATGTTGTGAGTCCCAATTCCATCAACCCACGTTCACA  744

seq1  TCTCATCTATTCCTCAGGCGTGTTTTGCTATGTGGAATGCTCCCTCATAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATCTATTCCTCAGGCGTGTTTTGCTATGTGGAATGCTCCCTCATAA  794

seq1  CTGAAGCGGGTAAAGATTTGGTGCACATATATTTTCCCTTTAGTCATTCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGCGGGTAAAGATTTGGTGCACATATATTTTCCCTTTAGTCATTCT  844

seq1  TCCCAGGACTCACATTTAATTCTCTTCCAACTGAGAGCTGACCTGCAATT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGGACTCACATTTAATTCTCTTCCAACTGAGAGCTGACCTGCAATT  894

seq1  CTTCTCACATGTGGTCTCAGATCTATCAAGACCTTGATGTTTATAGTCCA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCACATGTGGTCTCAGATCTATCAAGACCTTGATGTTTATAGTCCA  944

seq1  ATCAAGTTATGCAAAAGTAGTATGGCACATATGAGAGAGTCCTTTTCTGA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGTTATGCAAAAGTAGTATGGCACATATGAGAGAGTCCTTTTCTGA  994

seq1  GATGAGCTAAGCCATGGGTCCTTGTATGTAACAGAGTCATCTAATGACCT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGCTAAGCCATGGGTCCTTGTATGTAACAGAGTCATCTAATGACCT  1044

seq1  TTCAGAAAGAAAACTAACTTTTAGTAAGAGCCACATGAGTCATAGAATTC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAAAGAAAACTAACTTTTAGTAAGAGCCACATGAGTCATAGAATTC  1094