BAC Information

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BAC

Clone NameB6Ng01-171B10
Chromosome12 (Build37)
Map Location 43,083,541 - 43,084,641
singlet/doubletsinglet
Overlap genenone
Upstream geneLrrn3, Immp2l
Downstream geneEG638533
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-171B10.bB6Ng01-171B10.g
ACCGA000064GA000065
length1,1051,152
definitionB6Ng01-171B10.b B6Ng01-171B10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaggtcaacctaggacaaagctaatttaagcagaatggtaattt
cagggcaaggtcccagccagctatcttattgtctatgctcatgcttgctg
tctttttcaatagaacatggggctgaggtcaagggatgctgactcatggg
ataatcagaagagaacctggggtaaagattaaattgatatgtaaaataaa
agactgagtttttcatctgaaagagatgagctatcctgagaattttgaga
atagcaagaggaagctgtcttgaacagaacacaaagaaaaagcagtctgg
aaagcagtcctgagcagaacgtaggccttcagcttggacccatgatttga
cttcaagttctttgttttgctgccctcaaacatcccttctctcagaaccc
ctctccaaactgaacctgatccttggcagttgttacatgcattagacatc
ctggatgtcttaaaacactctgctatgcccaaaagagtaatagagaaaag
gtatgtggtcacagcaacaccagagttgggacatctgatgaaaggtgagg
tgaggtcacatggcagggtcactggagaaattataagtggcaactgtgag
ttagttccagagggtacacatagccagcaatctttaatgcaactagtgtg
ggtgacattaaggagctggtaggctgaggtcagggtctgaagcagaagat
aaaaatgacatgttagtgctattaaggaagtaaggaccactcgagccccg
ggcttccttgccagcggagttgcctgacacccgcaagggcccacacagga
ttccccacgggatcctaagacctctagtgagtggaacacaacttctgcca
ggagtccgggttcgaacaccagatatctgggtaccttccctgcaggaagg
agagcttttcctgcagagaatactctacccactgaaactaaggagagtgc
tacccctcccaggtcttgcttataggaggctaacagagtcaacttgagaa
acaaggctctacagagacactataacagctagcttcagaagattaccaga
atgggcgaaggcaacgtagaatcctactaacaggaatcagaccacctcac
atcat

gaattcttacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtgtggtggttcctca
gaaaactggatatagcactaccggaggatctagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcataaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatatccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggaggtacagagacaaagtttggagctgagataa
aaagatggaccaagtagagactgtcatatccggggatccatcccataatc
agcttccaaatgctgacaccattgcatacactagcaagattatcctgaaa
ggaccctgatatagctgtctcttgtcagagtatgcctggcctagcaaaca
tagaagtggatgctcacagtcggctattgatggatcacatggcccccaat
gaggagctagagaaagtacccaggaagctaagggatctgcaacctatagt
gaacaacattatgaactacagtaccgagctctttgtcttagctgcatatg
tatccaaagatgcttagccgtcatacactgaagaaaggtccatgaccgca
ctttatgcaggacaggtacctcagtctgaaatatgcgcactgtggcagtt
ga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_43083541_43084641
seq2: B6Ng01-171B10.b_42_1146 (reverse)

seq1  ATGATGGTGA-GTGGTCTTGATTTCTGTTAGTAGGATTCTTACGTTTGCC  49
      ||||| |||| |||||| ||||| ||||||||||||||| |||| |||||
seq2  ATGAT-GTGAGGTGGTC-TGATTCCTGTTAGTAGGATTC-TACG-TTGCC  46

seq1  TTTCGCCA-TCTGGTAATC-TCTGAAGCTAGCTGTTATAGTTGTCTCTGT  97
      ||   ||| |||||||||| |||||||||||||||||||| |||||||||
seq2  TTCGCCCATTCTGGTAATCTTCTGAAGCTAGCTGTTATAG-TGTCTCTGT  95

seq1  TAAGAG-CTTG-TTCTTCAGGTGACTCTGTTAGCCT-CTATAAGC-AGAC  143
        |||| |||| ||||  || ||||||||||||||| |||||||| ||||
seq2  --AGAGCCTTGTTTCTCAAGTTGACTCTGTTAGCCTCCTATAAGCAAGAC  143

seq1  CTGGGA-GGGTAGCACTCTCCTTAGTTTCAGTGGGTAGAGTATTCTCTGC  192
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAGGGGTAGCACTCTCCTTAGTTTCAGTGGGTAGAGTATTCTCTGC  193

seq1  AGG-AAAGCTCT-CTTCTTGCAGGGAAGGTACCCAGATATCTGGTGTTCG  240
      ||| |||||||| |||| ||||||||||||||||||||||||||||||||
seq2  AGGAAAAGCTCTCCTTCCTGCAGGGAAGGTACCCAGATATCTGGTGTTCG  243

seq1  AA-CCGGACTCCTGGCAGAAGTTGTGTTCCACTCACTAGAGGTCTTAGGA  289
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCGGACTCCTGGCAGAAGTTGTGTTCCACTCACTAGAGGTCTTAGGA  293

seq1  TCCCGTGGGGAATCCTGTGTGGGCCCTTGCGGGTGTCAGGCAACTCCGCT  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGTGGGGAATCCTGTGTGGGCCCTTGCGGGTGTCAGGCAACTCCGCT  343

seq1  GGCAAGGAAGCCCGGGGCTCGAGTGGTCCTTACTTCCTTAATAGCACTAA  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGGAAGCCCGGGGCTCGAGTGGTCCTTACTTCCTTAATAGCACTAA  393

seq1  CATGTCATTTTTATCTTCTGCTTCAGACCCTGACCTCAGCCTACCAGCTC  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCATTTTTATCTTCTGCTTCAGACCCTGACCTCAGCCTACCAGCTC  443

seq1  CTTAATGTCACCCACACTAGTTGCATTAAAGATTGCTGGCTATGTGTACC  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATGTCACCCACACTAGTTGCATTAAAGATTGCTGGCTATGTGTACC  493

seq1  CTCTGGAACTAACTCACAGTTGCCACTTATAATTTCTCCAGTGACCCTGC  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGAACTAACTCACAGTTGCCACTTATAATTTCTCCAGTGACCCTGC  543

seq1  CATGTGACCTCACCTCACCTTTCATCAGATGTCCCAACTCTGGTGTTGCT  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGACCTCACCTCACCTTTCATCAGATGTCCCAACTCTGGTGTTGCT  593

seq1  GTGACCACATACCTTTTCTCTATTACTCTTTTGGGCATAGCAGAGTGTTT  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACCACATACCTTTTCTCTATTACTCTTTTGGGCATAGCAGAGTGTTT  643

seq1  TAAGACATCCAGGATGTCTAATGCATGTAACAACTGCCAAGGATCAGGTT  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACATCCAGGATGTCTAATGCATGTAACAACTGCCAAGGATCAGGTT  693

seq1  CAGTTTGGAGAGGGGTTCTGAGAGAAGGGATGTTTGAGGGCAGCAAAACA  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTGGAGAGGGGTTCTGAGAGAAGGGATGTTTGAGGGCAGCAAAACA  743

seq1  AAGAACTTGAAGTCAAATCATGGGTCCAAGCTGAAGGCCTACGTTCTGCT  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACTTGAAGTCAAATCATGGGTCCAAGCTGAAGGCCTACGTTCTGCT  793

seq1  CAGGACTGCTTTCCAGACTGCTTTTTCTTTGTGTTCTGTTCAAGACAGCT  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACTGCTTTCCAGACTGCTTTTTCTTTGTGTTCTGTTCAAGACAGCT  843

seq1  TCCTCTTGCTATTCTCAAAATTCTCAGGATAGCTCATCTCTTTCAGATGA  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTGCTATTCTCAAAATTCTCAGGATAGCTCATCTCTTTCAGATGA  893

seq1  AAAACTCAGTCTTTTATTTTACATATCAATTTAATCTTTACCCCAGGTTC  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTCAGTCTTTTATTTTACATATCAATTTAATCTTTACCCCAGGTTC  943

seq1  TCTTCTGATTATCCCATGAGTCAGCATCCCTTGACCTCAGCCCCATGTTC  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTGATTATCCCATGAGTCAGCATCCCTTGACCTCAGCCCCATGTTC  993

seq1  TATTGAAAAAGACAGCAAGCATGAGCATAGACAATAAGATAGCTGGCTGG  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAAAAAGACAGCAAGCATGAGCATAGACAATAAGATAGCTGGCTGG  1043

seq1  GACCTTGCCCTGAAATTACCATTCTGCTTAAATTAGCTTTGTCCTAGGTT  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTGCCCTGAAATTACCATTCTGCTTAAATTAGCTTTGTCCTAGGTT  1093

seq1  GACCTTGAATTC  1101
      ||||||||||||
seq2  GACCTTGAATTC  1105


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