BAC Information

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BAC

Clone NameB6Ng01-173D06
Chromosome12 (Build37)
Map Location 43,278,796 - 43,279,896
singlet/doubletsinglet
Overlap genenone
Upstream geneImmp2l, EG638533
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-173D06.bB6Ng01-173D06.g
ACCGA001613GA001614
length1,1381,184
definitionB6Ng01-173D06.b B6Ng01-173D06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattcatcttaggcagagtggagaaattgttccagtaccactgcc
aaggatgacaaaagtgtttccaataaaaattacagtaaaataatcatttt
cctctttaatgagccagaagatatttaaaaatagctgagaccttgagaac
tccagaaagttcagatcttagagaaatttgcctcacaaaaaagtgtacta
ttttccaaaaattagttcaaatagatttaatatctgatgtgatttcttat
taattacaaactacatgttaattttcaaatgtcttgttttgttttgtttt
gttttgagtattttattgtaactcagacacagaaaatggaagataaacac
tgtctggacagtacattctaagggcttacatacccatcaatatatcataa
actgaggggagttttaaataatgtaacactaaaggcccatcgctaataaa
gttgcaatcactcacctatttaaaaatcatttttgaaactgcatgtttca
tacatttttctaagaatcagaaatagaataggagagacatagctgcctta
tgctggttctggtgtaaagaaagaaacagagtaattcagaaattaagaga
ttttcagatttctatgaaagacagacaagatgggagagaaactaatgaac
tgtactggcgagtttacaggcaacttgacataatctagaatcatcacaga
ggaagtagcctcagttgagaaaacacctccatgagattcatctgtaaggc
attttatcaattagtgatcagttggggtaggtgtgacccattttgggtag
agctatccctgggctggtggtcctgggttctataaaaaaataaatatata
aaaagcaagtcatgagaagcaagctagtaagacgacccatccatgaactc
ttttttttttttcaattttttattagatattttcttcatttacatttcaa
atgctatcccaaaagtcccctatactctcaccacaccctactcccctaca
cacccacttcttggccctggcattcctctgtactggggcatataaagttg
caagacaaggggcctctcctttccatgatgctgactaggcatctctgcta
cataatgcagctagaagcacaagctctgggaagtactg

gaattcctgatctttccaagacttttatcgtgaatgggtgttggattttg
acaaatgctttctcagcatctgacgagatgatcatgtgctttttgtcttt
gagtttgttcatatactggattacgttgatggatttccatatattgaacc
atccctgcatccctgggatgaaacctacttggtcaggatggatgattgtt
ttgatgtgttcttggatttggttagcaagaactttattgaggatttttgc
atcgatattcataagggaaattggtctgaagttctgtatctttgttgggt
ctttttgtggtttaggtatcagagtaattgtggcttcatagaatgaattg
ggtagagtaccttccgtttctattttgtggaatagtttgtgaagaactgg
aattaggtcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggcttttttttttggttgggagactattaatgactgcttctatt
tcttcaggggatataggactgttgagatcattaacctgatcttgatttag
ctttggtacctggtatctgtctagaaacttgtccatttcatccaggtttt
ccagttttgttgagtatagccttttgtagaaggatctgatggtgttttgg
atttcttcaggatctgttgttatgtctcccttttcatttctgattttgtt
aattaggatgctttccctgtgccctctagtgagtctggctaagggtttat
ctatcttgatgattttctcaaagaaccagctccttgattggttgattctt
tgaatagttcttcttgtttccactttggtttgatttcacccccaagtttg
attatttcctgccttctactcctcttgggtgaatttgcttccttttcttc
tagaccttttagtgtgttgtcaagctgctaatgtgtgcttctcttctagt
ttctttttggaggcactcagagctatgagtttcctctaggaatgctttca
ttgtgtctcataggtttgggtatgttgtggccttcattttcattaacctc
caaaaggtctttatttctttctttattcctccttggaccagttatcattt
gagagaggttttgttcagtttccagggagtgttggcctttcatataggta
tattttgcttactgagagatcacacgtatgcatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_43278796_43279896
seq2: B6Ng01-173D06.b_83_1180 (reverse)

seq1  CAGTAC-TCCCAGAGCTTGTGCCTCTAGCTGCA-TATGTAGCAGAAGATG  48
      |||||| ||||||||||||||| |||||||||| |||||||||| |||| 
seq2  CAGTACTTCCCAGAGCTTGTGCTTCTAGCTGCATTATGTAGCAG-AGAT-  48

seq1  GCCTAGTCAGCCATCATTGGAAAGAGAGGCCCCTTGGTCTTGCAAACTTT  98
      |||||||||| |||||| | || |||||||||||| ||||||| ||||||
seq2  GCCTAGTCAG-CATCATGGAAAGGAGAGGCCCCTT-GTCTTGC-AACTTT  95

seq1  ATATGCCCCAGTACAGAGGAATGCCAGGGCCAAGAAGTGGGTGTGTAGGG  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCCCCAGTACAGAGGAATGCCAGGGCCAAGAAGTGGGTGTGTAGGG  145

seq1  GAGTAGGGTGTGGTGAGAGTATAGGGGACTTTTGGGATAGCATTTGAAAT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGGGTGTGGTGAGAGTATAGGGGACTTTTGGGATAGCATTTGAAAT  195

seq1  GTAAATGAAGAAAATATCTAATAAAAAATTGAAAAAAAAAAAAGAGTTCA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATGAAGAAAATATCTAATAAAAAATTGAAAAAAAAAAAAGAGTTCA  245

seq1  TGGATGGGTCGTCTTACTAGCTTGCTTCTCATGACTTGCTTTTTATATAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGGGTCGTCTTACTAGCTTGCTTCTCATGACTTGCTTTTTATATAT  295

seq1  TTATTTTTTTATAGAACCCAGGACCACCAGCCCAGGGATAGCTCTACCCA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTTTATAGAACCCAGGACCACCAGCCCAGGGATAGCTCTACCCA  345

seq1  AAATGGGTCACACCTACCCCAACTGATCACTAATTGATAAAATGCCTTAC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGGTCACACCTACCCCAACTGATCACTAATTGATAAAATGCCTTAC  395

seq1  AGATGAATCTCATGGAGGTGTTTTCTCAACTGAGGCTACTTCCTCTGTGA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAATCTCATGGAGGTGTTTTCTCAACTGAGGCTACTTCCTCTGTGA  445

seq1  TGATTCTAGATTATGTCAAGTTGCCTGTAAACTCGCCAGTACAGTTCATT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCTAGATTATGTCAAGTTGCCTGTAAACTCGCCAGTACAGTTCATT  495

seq1  AGTTTCTCTCCCATCTTGTCTGTCTTTCATAGAAATCTGAAAATCTCTTA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCTCTCCCATCTTGTCTGTCTTTCATAGAAATCTGAAAATCTCTTA  545

seq1  ATTTCTGAATTACTCTGTTTCTTTCTTTACACCAGAACCAGCATAAGGCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGAATTACTCTGTTTCTTTCTTTACACCAGAACCAGCATAAGGCA  595

seq1  GCTATGTCTCTCCTATTCTATTTCTGATTCTTAGAAAAATGTATGAAACA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATGTCTCTCCTATTCTATTTCTGATTCTTAGAAAAATGTATGAAACA  645

seq1  TGCAGTTTCAAAAATGATTTTTAAATAGGTGAGTGATTGCAACTTTATTA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTTTCAAAAATGATTTTTAAATAGGTGAGTGATTGCAACTTTATTA  695

seq1  GCGATGGGCCTTTAGTGTTACATTATTTAAAACTCCCCTCAGTTTATGAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGATGGGCCTTTAGTGTTACATTATTTAAAACTCCCCTCAGTTTATGAT  745

seq1  ATATTGATGGGTATGTAAGCCCTTAGAATGTACTGTCCAGACAGTGTTTA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGATGGGTATGTAAGCCCTTAGAATGTACTGTCCAGACAGTGTTTA  795

seq1  TCTTCCATTTTCTGTGTCTGAGTTACAATAAAATACTCAAAACAAAACAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCATTTTCTGTGTCTGAGTTACAATAAAATACTCAAAACAAAACAA  845

seq1  AACAAAACAAGACATTTGAAAATTAACATGTAGTTTGTAATTAATAAGAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAACAAGACATTTGAAAATTAACATGTAGTTTGTAATTAATAAGAA  895

seq1  ATCACATCAGATATTAAATCTATTTGAACTAATTTTTGGAAAATAGTACA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACATCAGATATTAAATCTATTTGAACTAATTTTTGGAAAATAGTACA  945

seq1  CTTTTTTGTGAGGCAAATTTCTCTAAGATCTGAACTTTCTGGAGTTCTCA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTGTGAGGCAAATTTCTCTAAGATCTGAACTTTCTGGAGTTCTCA  995

seq1  AGGTCTCAGCTATTTTTAAATATCTTCTGGCTCATTAAAGAGGAAAATGA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTCAGCTATTTTTAAATATCTTCTGGCTCATTAAAGAGGAAAATGA  1045

seq1  TTATTTTACTGTAATTTTTATTGGAAACACTTTTGTCATCCTTGGCAGTG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTACTGTAATTTTTATTGGAAACACTTTTGTCATCCTTGGCAGTG  1095

seq1  GTA  1101
      |||
seq2  GTA  1098


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