BAC Information

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BAC

Clone NameB6Ng01-181C12
Chromosome12 (Build37)
Map Location 26,852,863 - 26,854,051
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042973, LOC100042974, LOC668726
Downstream geneRnf144, Rsad2, Tyki, LOC668731, 1700020D12Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-181C12.g
ACCGA007396
length1,166
definitionB6Ng01-181C12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaatctaaattctacacattagaaagccaagaaattagcatgta
aaatggctaaggagtttacattcctctgcttattgtcaaaaatgtaaatg
taggtgctgaagcatgggctcatttcaaagcaagaagggtcatggatgaa
ctgagtgaaagaaaggtgtctctcgctgttagaagagacagggactgtgg
ctgagccttgtgatggagttttagccatttctgtgaatttgacagtgtca
tagacataacccaatttgatcaagtcatatagagaattatgaaaccatgt
tgtttgtaaaacaagaatgaaaatcatctggccaaataggcttttcttaa
ggaaatggttagacataaataatgtaaaataaactcatagttcagcacac
atgttggataaattagactgatagcaatattctaaaaatcttatttttac
cttcataaagaaaggaaaattatttaccaacattttttttccatttttta
ttaggtatttaactcatttacatttccaatgctataccaaaagtccccca
tatccacccacccccactcccctgcccacccactccccctttttggccct
ggtgttcccctgtactggggcatataaagtttgcaagtccaatgggcctc
tctttccagtgatggccgactaggccatcttttgatatatatgcagctag
agtcaaaagctccggggtactggttagttcataatgttgttccaatttac
caacattttgagaaacctcataaaatacattgatcacaagaattacatgg
aaatagaaatgtagtaactggttccttgatgaattgctttatttgaacac
aactctccattagacatctcccccactacacatgccataggtttctgttt
tagtcactgttctattgctgtgagaagacaccaaggcaacctttgaatgg
aagtgcttacattggaggcttccttatgggttcagaaggttagtctgtat
atcatggtagggagtataggagcagcagagtaagcattggggatgtagct
aaaacatcacatctattgtcaggatgagcgagggtagagagaagaacctg
tctggtgtgtcctgaaatgtccagactatctttgtgaccactctaatcct
tcttaaacattccatc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_26852863_26854051
seq2: B6Ng01-181C12.g_65_1230 (reverse)

seq1  GATGGATTGTTTAAGAAGGATTAGGAGTTGTGTCACAAAGATAGTCTTGG  50
      |||||| |||||||||||||||| ||||   ||||||||||||||| |||
seq2  GATGGAATGTTTAAGAAGGATTA-GAGT--GGTCACAAAGATAGTC-TGG  46

seq1  ACATTTTCTAAAGGCCACACCAGACCAGTTTTCCTCTCTCTCTTTCTCTC  100
      ||||||     ||| ||||||||||  ||| | ||||||  |   ||| |
seq2  ACATTT----CAGGACACACCAGACAGGTTCTTCTCTCTACC---CTCGC  89

seq1  TGCCTCCATCTTGACAATTAGATGTGATGTTTTAGCTACCATCCCAATGC  150
      |     |||| |||||| |||||||||||||||||||||   ||||||| 
seq2  T-----CATCCTGACAA-TAGATGTGATGTTTTAGCTACATCCCCAATG-  132

seq1  CTTACTTCCTTGCCTGCTCCTATACTCCCTACCATGATAATACAGACTAA  200
      ||||||  ||   ||||||||||||||||||||||||| |||||||||||
seq2  CTTACT--CT--GCTGCTCCTATACTCCCTACCATGAT-ATACAGACTAA  177

seq1  CCTTCTGAAACCATAAGGAAGCCTCCAATGTAAGCACTTCCATTCAAAGG  250
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTGAACCCATAAGGAAGCCTCCAATGTAAGCACTTCCATTCAAAGG  227

seq1  TTGCCTTGGTGTCTTCTCACAGCAATAGAACAGTGACTAAAACAGAAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTTGGTGTCTTCTCACAGCAATAGAACAGTGACTAAAACAGAAACC  277

seq1  TATGGCATGTGTAGTGGGGGAGATGTCTAATGGAGAGTTGTGTTCAAATT  350
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TATGGCATGTGTAGTGGGGGAGATGTCTAATGGAGAGTTGTGTTCAAA-T  326

seq1  AAAGCAATTCATCAAGGAACCAGTTACTACATTTCTA-TTCCATGTAATT  399
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AAAGCAATTCATCAAGGAACCAGTTACTACATTTCTATTTCCATGTAATT  376

seq1  CTTGTGATCAATGTATTTTATGAGGTTTCTCAAAATGTTGGTAAATTGGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGATCAATGTATTTTATGAGGTTTCTCAAAATGTTGGTAAATTGGA  426

seq1  ACAACATTATGAACTAACCAGTACCCCGGAGCTTTTGACTCTAGCTGCAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACATTATGAACTAACCAGTACCCCGGAGCTTTTGACTCTAGCTGCAT  476

seq1  ATATATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATT  526

seq1  GGACTTGCAAACTTTATATGCCCCAGTACAGGGGAACACCAGGGCCAAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTGCAAACTTTATATGCCCCAGTACAGGGGAACACCAGGGCCAAAA  576

seq1  AGGGGGAGTGGGTGGGCAGGGGAGTGGGGGTGGGTGGATATGGGGGACTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGAGTGGGTGGGCAGGGGAGTGGGGGTGGGTGGATATGGGGGACTT  626

seq1  TTGGTATAGCATTGGAAATGTAAATGAGTTAAATACCTAATAAAAAATGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTATAGCATTGGAAATGTAAATGAGTTAAATACCTAATAAAAAATGG  676

seq1  AAAAAAAATGTTGGTAAATAATTTTCCTTTCTTTATGAAGGTAAAAATAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAATGTTGGTAAATAATTTTCCTTTCTTTATGAAGGTAAAAATAA  726

seq1  GATTTTTAGAATATTGCTATCAGTCTAATTTATCCAACATGTGTGCTGAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTAGAATATTGCTATCAGTCTAATTTATCCAACATGTGTGCTGAA  776

seq1  CTATGAGTTTATTTTACATTATTTATGTCTAACCATTTCCTTAAGAAAAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGAGTTTATTTTACATTATTTATGTCTAACCATTTCCTTAAGAAAAG  826

seq1  CCTATTTGGCCAGATGATTTTCATTCTTGTTTTACAAACAACATGGTTTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTTGGCCAGATGATTTTCATTCTTGTTTTACAAACAACATGGTTTC  876

seq1  ATAATTCTCTATATGACTTGATCAAATTGGGTTATGTCTATGACACTGTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTCTCTATATGACTTGATCAAATTGGGTTATGTCTATGACACTGTC  926

seq1  AAATTCACAGAAATGGCTAAAACTCCATCACAAGGCTCAGCCACAGTCCC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCACAGAAATGGCTAAAACTCCATCACAAGGCTCAGCCACAGTCCC  976

seq1  TGTCTCTTCTAACAGCGAGAGACACCTTTCTTTCACTCAGTTCATCCATG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTTCTAACAGCGAGAGACACCTTTCTTTCACTCAGTTCATCCATG  1026

seq1  ACCCTTCTTGCTTTGAAATGAGCCCATGCTTCAGCACCTACATTTACATT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTCTTGCTTTGAAATGAGCCCATGCTTCAGCACCTACATTTACATT  1076

seq1  TTTGACAATAAGCAGAGGAATGTAAACTCCTTAGCCATTTTACATGCTAA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACAATAAGCAGAGGAATGTAAACTCCTTAGCCATTTTACATGCTAA  1126

seq1  TTTCTTGGCTTTCTAATGTGTAGAATTTAGATTTGAATTC  1189
      ||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGGCTTTCTAATGTGTAGAATTTAGATTTGAATTC  1166


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