BAC Information

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BAC

Clone NameB6Ng01-183O18
Chromosome12 (Build37)
Map Location 14,683,747 - 14,831,714
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC238091, EG633789, LOC668481, AW125753, LOC100043256
Downstream geneMap1lc3-ps7, LOC668492, LOC100042426, LOC217409, Trib2, LOC100043268, EG432636
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183O18.bB6Ng01-183O18.g
ACCGA009427GA009428
length1,1661,162
definitionB6Ng01-183O18.b B6Ng01-183O18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,830,548 - 14,831,714)(14,683,747 - 14,684,900)
sequence
gaattctaatatttctcaatatccccatagagtaatatcattacatttgt
cctttatgtatagtttcctcttaaaccatgttttccttttaaatattttt
aattcctaataagcgatcatgtatttaaataaatgagtatggacaacaaa
atttctttacaaaattacaaatattcaaaagagtttgattttgactaatc
ttttatgaaattcatattccatgttttataaaggtttctgtaagagtgaa
ttgaatgtgatgtaggtcagcagaataccacttcattaatagtctgtgga
aagttatgaaaaatatacccaatattctcatttgcttgtggtttataaaa
agatatgtgtacctgtcattttgtatacgattataaattttagactagat
aaattctgcagtttcttatattagaattcctagatatacatctgtgcttc
ctggattctttaacctgaaggtatggattagaagttcatacaatccaacc
ataacagaaaccaccccttccaagaaaacttcacactggattgttattgt
taataaattcaagaattaacatgaatccctcttttaacctttctcataaa
atctagagaaattgttttttaaaatgttcatactgaaagccactgacctt
tacaaaattgaaaagaataaggaaataagaggttcattctcctataatga
cattaaacttaaaatttcgtttgaaacactcttggagctaaggcctttgg
aatgggagataaggtaatgctgtgtgagtatatcacatatccttttcttg
taagtgctaaatggattgaaacaatacaaacattgcattttctctcacag
acaggtaatttaaatatcttcttttaaatatataataaactctgcttctt
gaacagcttaccactacttgggaagttggaattctacctcagtattgcat
aactaaaggcaggcattttgataggtataatactattgagagacaaggaa
tgaaaagggtaatgcaattctacaacaggaagtggcagggaataccctta
gggaggatttatatgcataatcatgggcaacctgagagctctcacaggat
attggggtctggctggctctgataatgctgtgaatggtggtgaagcatgg
gggagtccatcatagt

gaattcactgctattcccatagaatttgcttagtatttcttcacctttag
tatcctgttattcttatcttctagccaactttataatattcagtggccca
gttgggctgcacttaaccttactcagagaagctttctatggatgtgggta
gtgattaataaagaggacagtgacttttcaaaatactgagaataagcaag
agtaactgctcagccttaaaggggccatgcatatcaagctctcccaaaga
ggtcagagactatctccaaagagtgtgggaataggaggatgagaggaata
ttgaaatgccatcctctcggcacaacattggtgcaatacacatgagctca
tagcagccgtgtaagacttgcacaagattaagcctgttgtgttccacatg
gaaggagcatgcaacttcccccatctgagaacctttttaacattttttgg
attcttctcaatggagagccactattctatggagaatgaaaactgttacc
agtggatgacctcatatccatgcacatatgggaagcactacctgggctct
gtattgttgtctaaaagagtatcactcaaggagagggcttactagcccat
cagctgtaacatgtcctcttttgtattgatactgttggttactacaccag
tatggtttcatttattctgttcttctataaaactatttctgtcatcggag
atagtatctagtaaaggcacataaaaattttgaatcaatcttccaacata
atatatctttgttgcttcctattctgaccagcagaaaagagcgacaacac
tacgttcttctcaaagcagtttattcaggaacctttcaacatcatgcatg
aatctctctccagaaatcaatctctccaggagtaaacaacaaccaactgc
ccccaatcgcaatcccttatattatcctctcaaccacgctccatcagccc
agtccacgtaacagcagtccattggccagaatcatccactcgtcatatgg
tccgatttgcatcatggtgcacctggtggcggttcttcctgatggatgcg
acttatttttcaggtggatgagaagtcaaggtgcaagttcataagacctg
gctgcagtccaggcaccttatcctggaactgctgccaacccaactctcac
atttctttgata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_14830548_14831714
seq2: B6Ng01-183O18.b_48_1213 (reverse)

seq1  ACTATGATGTGACTCCCCAACTGCTTCAC--ACATTCACAGCATAATCAA  48
      ||||||||| |||||||| | ||||||||   |||||||||||| ||| |
seq2  ACTATGATG-GACTCCCCCA-TGCTTCACCACCATTCACAGCATTATC-A  47

seq1  GAGCCAG-CAGA-CCCAATATCCTGTGAGAGCTTCTCAGGTTTGGCCATG  96
      ||||||| |||| ||||||||||||||||||| ||||||| ||| |||||
seq2  GAGCCAGCCAGACCCCAATATCCTGTGAGAGC-TCTCAGG-TTGCCCATG  95

seq1  ATAATGCATATTAAATCCTCCCT-AGGGTATT-CCTGCAACTTCTTGTTG  144
      || ||||||| |||||||||||| |||||||| ||||| ||||| |||||
seq2  ATTATGCATA-TAAATCCTCCCTAAGGGTATTCCCTGCCACTTCCTGTTG  144

seq1  TAGAATTGCATTACCCTTTTCATTCCTTGTCTCTCAATAGTATTATACCT  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATTGCATTACCCTTTTCATTCCTTGTCTCTCAATAGTATTATACCT  194

seq1  ATCAAAATGCCTGCCTTTAGTTTATGCAATACTGAGGTAGAATTCCAACT  244
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ATCAAAATGCCTGCCTTTAG-TTATGCAATACTGAGGTAGAATTCCAACT  243

seq1  TCCCAAGTAGTGGTAAGCTGTTCAAGAAGCAGAGTTTATTATATATTTAA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAGTAGTGGTAAGCTGTTCAAGAAGCAGAGTTTATTATATATTTAA  293

seq1  AAGAAGATATTTAAATTACCTGTCTGTGAGAGAAAATGCAATGTTTGTAT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGATATTTAAATTACCTGTCTGTGAGAGAAAATGCAATGTTTGTAT  343

seq1  TGTTTCAATCCATTTAGCACTTACAAGAAAAGGATATGTGATATACTCAC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCAATCCATTTAGCACTTACAAGAAAAGGATATGTGATATACTCAC  393

seq1  ACAGCATTACCTTATCTCCCATTCCAAAGGCCTTAGCTCCAAGAGTGTTT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCATTACCTTATCTCCCATTCCAAAGGCCTTAGCTCCAAGAGTGTTT  443

seq1  CAAACGAAATTTTAAGTTTAATGTCATTATAGGAGAATGAACCTCTTATT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACGAAATTTTAAGTTTAATGTCATTATAGGAGAATGAACCTCTTATT  493

seq1  TCCTTATTCTTTTCAATTTTGTAAAGGTCAGTGGCTTTCAGTATGAACAT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTATTCTTTTCAATTTTGTAAAGGTCAGTGGCTTTCAGTATGAACAT  543

seq1  TTTAAAAAACAATTTCTCTAGATTTTATGAGAAAGGTTAAAAGAGGGATT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAAACAATTTCTCTAGATTTTATGAGAAAGGTTAAAAGAGGGATT  593

seq1  CATGTTAATTCTTGAATTTATTAACAATAACAATCCAGTGTGAAGTTTTC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTAATTCTTGAATTTATTAACAATAACAATCCAGTGTGAAGTTTTC  643

seq1  TTGGAAGGGGTGGTTTCTGTTATGGTTGGATTGTATGAACTTCTAATCCA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAGGGGTGGTTTCTGTTATGGTTGGATTGTATGAACTTCTAATCCA  693

seq1  TACCTTCAGGTTAAAGAATCCAGGAAGCACAGATGTATATCTAGGAATTC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTCAGGTTAAAGAATCCAGGAAGCACAGATGTATATCTAGGAATTC  743

seq1  TAATATAAGAAACTGCAGAATTTATCTAGTCTAAAATTTATAATCGTATA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATAAGAAACTGCAGAATTTATCTAGTCTAAAATTTATAATCGTATA  793

seq1  CAAAATGACAGGTACACATATCTTTTTATAAACCACAAGCAAATGAGAAT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATGACAGGTACACATATCTTTTTATAAACCACAAGCAAATGAGAAT  843

seq1  ATTGGGTATATTTTTCATAACTTTCCACAGACTATTAATGAAGTGGTATT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGTATATTTTTCATAACTTTCCACAGACTATTAATGAAGTGGTATT  893

seq1  CTGCTGACCTACATCACATTCAATTCACTCTTACAGAAACCTTTATAAAA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGACCTACATCACATTCAATTCACTCTTACAGAAACCTTTATAAAA  943

seq1  CATGGAATATGAATTTCATAAAAGATTAGTCAAAATCAAACTCTTTTGAA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAATATGAATTTCATAAAAGATTAGTCAAAATCAAACTCTTTTGAA  993

seq1  TATTTGTAATTTTGTAAAGAAATTTTGTTGTCCATACTCATTTATTTAAA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGTAATTTTGTAAAGAAATTTTGTTGTCCATACTCATTTATTTAAA  1043

seq1  TACATGATCGCTTATTAGGAATTAAAAATATTTAAAAGGAAAACATGGTT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGATCGCTTATTAGGAATTAAAAATATTTAAAAGGAAAACATGGTT  1093

seq1  TAAGAGGAAACTATACATAAAGGACAAATGTAATGATATTACTCTATGGG  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGGAAACTATACATAAAGGACAAATGTAATGATATTACTCTATGGG  1143

seq1  GATATTGAGAAATATTAGAATTC  1167
      |||||||||||||||||||||||
seq2  GATATTGAGAAATATTAGAATTC  1166


seq1: chr12_14683747_14684900
seq2: B6Ng01-183O18.g_65_1226

seq1  GAATTCACTGCTATTCCCATAGAATTTGCTTAGTATTTCTTCACCTTTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGCTATTCCCATAGAATTTGCTTAGTATTTCTTCACCTTTAG  50

seq1  TATCCTGTTATTCTTATCTTCTAGCCAACTTTATAATATTCAGTGGCCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTGTTATTCTTATCTTCTAGCCAACTTTATAATATTCAGTGGCCCA  100

seq1  GTTGGGCTGCACTTAACCTTACTCAGAGAAGCTTTCTATGGATGTGGGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGGCTGCACTTAACCTTACTCAGAGAAGCTTTCTATGGATGTGGGTA  150

seq1  GTGATTAATAAAGAGGACAGTGACTTTTCAAAATACTGAGAATAAGCAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTAATAAAGAGGACAGTGACTTTTCAAAATACTGAGAATAAGCAAG  200

seq1  AGTAACTGCTCAGCCTTAAAGGGGCCATGCATATCAAGCTCTCCCAAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAACTGCTCAGCCTTAAAGGGGCCATGCATATCAAGCTCTCCCAAAGA  250

seq1  GGTCAGAGACTATCTCCAAAGAGTGTGGGAATAGGAGGATGAGAGGAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGAGACTATCTCCAAAGAGTGTGGGAATAGGAGGATGAGAGGAATA  300

seq1  TTGAAATGCCATCCTCTCGGCACAACATTGGTGCAATACACATGAGCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATGCCATCCTCTCGGCACAACATTGGTGCAATACACATGAGCTCA  350

seq1  TAGCAGCCGTGTAAGACTTGCACAAGATTAAGCCTGTTGTGTTCCACATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGCCGTGTAAGACTTGCACAAGATTAAGCCTGTTGTGTTCCACATG  400

seq1  GAAGGAGCATGCAACTTCCCCCATCTGAGAACCTTTTTAACATTTTTTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAGCATGCAACTTCCCCCATCTGAGAACCTTTTTAACATTTTTTGG  450

seq1  ATTCTTCTCAATGGAGAGCCACTATTCTATGGAGAATGAAAACTGTTACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTCTCAATGGAGAGCCACTATTCTATGGAGAATGAAAACTGTTACC  500

seq1  AGTGGATGACCTCATATCCATGCACATATGGGAAGCACTACCTGGGCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGATGACCTCATATCCATGCACATATGGGAAGCACTACCTGGGCTCT  550

seq1  GTATTGTTGTCTAAAAGAGTATCACTCAAGGAGAGGGCTTACTAGCCCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGTTGTCTAAAAGAGTATCACTCAAGGAGAGGGCTTACTAGCCCAT  600

seq1  CAGCTGTAACATGTCCTCTTTTGTATTGATACTGTTGGTTACTACACCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGTAACATGTCCTCTTTTGTATTGATACTGTTGGTTACTACACCAG  650

seq1  TATGGTTTCATTTATTCTGTTCTTCTATAAAACTATTTCTGTCATCGGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTTTCATTTATTCTGTTCTTCTATAAAACTATTTCTGTCATCGGAG  700

seq1  ATAGTATCTAGTAAAGGCACATAAAAATTTTGAATCAATCTTCCAACATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTATCTAGTAAAGGCACATAAAAATTTTGAATCAATCTTCCAACATA  750

seq1  ATATATCTTTGTTGCTTCCTATTCTGACCAGCAGAAAAGAGCGACAACAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATCTTTGTTGCTTCCTATTCTGACCAGCAGAAAAGAGCGACAACAC  800

seq1  TACGTTCTTCTCAAAGCAGTTTATTCAGGAACCTTTCAACATCATGCATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGTTCTTCTCAAAGCAGTTTATTCAGGAACCTTTCAACATCATGCATG  850

seq1  AATCTCTCTCCAGAAATCAATCTCTCCAGGAGTAAACAACAACCAACTGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCTCTCCAGAAATCAATCTCTCCAGGAGTAAACAACAACCAACTGC  900

seq1  CCCCAATCGCAATCCCTTATA-TATCCTCTCAACCACGCTCCATCAGCCC  949
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CCCCAATCGCAATCCCTTATATTATCCTCTCAACCACGCTCCATCAGCCC  950

seq1  AGTCCACGTAACAGCAGTCCATTGGCCAGAATCAT-CACTCGTCATATGG  998
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AGTCCACGTAACAGCAGTCCATTGGCCAGAATCATCCACTCGTCATATGG  1000

seq1  TCCGATTTTGCATCATGGTGCACCT-GTG--CGTTC-TCCTGATGGATGC  1044
      ||||| ||||||||||||||||||| |||   |||| |||||||||||||
seq2  TCCGA-TTTGCATCATGGTGCACCTGGTGGCGGTTCTTCCTGATGGATGC  1049

seq1  GACTTA-TTTTCAGGTGGATGAGGAAGTC-AGGTGCAAG-TCATAAGACT  1091
      |||||| ||||||||||||||| |||||| ||||||||| ||||||||| 
seq2  GACTTATTTTTCAGGTGGATGA-GAAGTCAAGGTGCAAGTTCATAAGACC  1098

seq1  TGGCTGCAGTCCCGGGCAC--TATCTTGAGACTGCTGCCACACCCACTCC  1139
      |||||||||| || |||||  |||| ||  |||||||||| |||||   |
seq2  TGGCTGCAGT-CCAGGCACCTTATCCTGGAACTGCTGCCA-ACCCAACTC  1146

seq1  TCACATATC-TTGATA  1154
      |||||| || ||||||
seq2  TCACATTTCTTTGATA  1162


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