BAC Information

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BAC

Clone NameB6Ng01-185E03
Chromosome12 (Build37)
Map Location 44,786,455 - 44,892,518
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100039059
Downstream geneENSMUSG00000066507, LOC100039081, LOC664854, Dnajb9, LOC100039062, Pnpla8, Nrcam, EG620025
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-185E03.bB6Ng01-185E03.g
ACCGA010419GA010420
length94945
definitionB6Ng01-185E03.b B6Ng01-185E03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(44,786,455 - 44,786,548)(44,891,946 - 44,892,518)
sequence
gaattcattatacaaatctgtctatcttgctctgcttctctgtattattt
atcatctgggtttctatgttggtgttttgttattggggtgtgtg
gaattctttattatctttatgtcattcctgtggatacttgctcttttttt
ttttttaagttaactctttggaaggataagacccaaacatgtatacttgt
aattacaaccatctgatatttgaaaaagaggcaaaagagaaacaaaggag
agaagagagtgttttcaacaaattatgctgtaagaactgtctacatgcag
cagaagaaaattaggcctatatctaactccaagtagatcaaagacctcaa
cttgaatcctgaaacactaaaactatacatcttcttcataggtaagaaaa
caattaagtgaagaaaaaatacacagaatgggaaagactttgtgtcaatc
tgatggaggaataagacacataatatacaaagaacttgaaaaccagagtc
aaggaaacaaatgatccaaataaacaatgaatcaggaatcacaacagagt
tctcagtaacagaaataaaaatgcctaagaaatacttcaagaattattct
ttatttgtagcaattaagaaaatataaattaagacaactttgagataaca
tagcatcccagtctggatggcaacaaatgctgtcaaggttgtagagaaag
gggaaccctcagtcactattggtggaaatgcaagttggtgttgtcactct
ggaaatcagtatggagaacactcaaaacaaatacaaataaacctgtcata
tgattcaggcatatcactccttggtacatggccaagggttccaacatcct
actccacagataattgcttagcaacgttcattgctaccctgttcacatta
atcaggaaatggcaacagctaaatgtctttcaataggaagaaaatgaata
tgtgactccccaatttatagtaaatgtagcccttggttgcctctcagaag
ttaacagtggatctctatagctatagacacacatgcttaggaatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_44786455_44786548
seq2: B6Ng01-185E03.b_42_135

seq1  GAATTCATTATACAAATCTGTCTATCTTGCTCTGCTTCTCTGTATTATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTATACAAATCTGTCTATCTTGCTCTGCTTCTCTGTATTATTT  50

seq1  ATCATCTGGGTTTCTATGTTGGTGTTTTGTTATTGGGGTGTGTG  94
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCTGGGTTTCTATGTTGGTGTTTTGTTATTGGGGTGTGTG  94

seq1: chr12_44891946_44892518
seq2: B6Ng01-185E03.g_67_639 (reverse)

seq1  TTGCCATCCAGACTGGGATGCTATGTTATCTCAAAGTTGTCTTAATTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCATCCAGACTGGGATGCTATGTTATCTCAAAGTTGTCTTAATTTAT  50

seq1  ATTTTCTTAATTGCTACAAATAAAGAATAATTCTTGAAGTATTTCTTAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTTAATTGCTACAAATAAAGAATAATTCTTGAAGTATTTCTTAGG  100

seq1  CATTTTTATTTCTGTTACTGAGAACTCTGTTGTGATTCCTGATTCATTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTATTTCTGTTACTGAGAACTCTGTTGTGATTCCTGATTCATTGT  150

seq1  TTATTTGGATCATTTGTTTCCTTGACTCTGGTTTTCAAGTTCTTTGTATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTGGATCATTTGTTTCCTTGACTCTGGTTTTCAAGTTCTTTGTATA  200

seq1  TTATGTGTCTTATTCCTCCATCAGATTGACACAAAGTCTTTCCCATTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTGTCTTATTCCTCCATCAGATTGACACAAAGTCTTTCCCATTCTG  250

seq1  TGTATTTTTTCTTCACTTAATTGTTTTCTTACCTATGAAGAAGATGTATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTTTTCTTCACTTAATTGTTTTCTTACCTATGAAGAAGATGTATA  300

seq1  GTTTTAGTGTTTCAGGATTCAAGTTGAGGTCTTTGATCTACTTGGAGTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAGTGTTTCAGGATTCAAGTTGAGGTCTTTGATCTACTTGGAGTTA  350

seq1  GATATAGGCCTAATTTTCTTCTGCTGCATGTAGACAGTTCTTACAGCATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAGGCCTAATTTTCTTCTGCTGCATGTAGACAGTTCTTACAGCATA  400

seq1  ATTTGTTGAAAACACTCTCTTCTCTCCTTTGTTTCTCTTTTGCCTCTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTTGAAAACACTCTCTTCTCTCCTTTGTTTCTCTTTTGCCTCTTTT  450

seq1  TCAAATATCAGATGGTTGTAATTACAAGTATACATGTTTGGGTCTTATCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATATCAGATGGTTGTAATTACAAGTATACATGTTTGGGTCTTATCC  500

seq1  TTCCAAAGAGTTAACTTAAAAAAAAAAAAAGAGCAAGTATCCACAGGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAAGAGTTAACTTAAAAAAAAAAAAAGAGCAAGTATCCACAGGAAT  550

seq1  GACATAAAGATAATAAAGAATTC  573
      |||||||||||||||||||||||
seq2  GACATAAAGATAATAAAGAATTC  573