BAC Information

Click to search

BAC

Clone NameB6Ng01-185J18
Chromosome12 (Build37)
Map Location 9,774,338 - 9,775,326
singlet/doubletsinglet
Overlap genenone
Upstream geneF730043H23, Sdc1, Laptm4a, Matn3, Wdr35, Ttc32, LOC633030, LOC100042238, Osr1
Downstream geneLOC382567, Nt5c1b, Rdh14, LOC238074
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-185J18.b
ACCGA010675
length1,182
definitionB6Ng01-185J18.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccctggctgtaccccggatctcgcgtctctaacggcatgtgtttc
aaatgatggactagacggccgtccctgttaacacacggccgttggacttg
cttactttatatgccccagtgatagggaacgctggggactttggtgacga
gtgggtggggaggcagtatttttgtactggtttctaagctatctacataa
atccaaaatattctctctgagagagcattttcaagaaaggagaaactaat
atatccacttttaaagctaatcattttcagttattcacaattgctctgtt
cctgtctggatggtcactggagactctggcacccaagtaccataggctgt
cctgtcaagtataataagtacgattctgttcaagttcaaggggggccaca
cagctgtaggttggctctcagccataccagctatccccagaacagccttc
ctaaagtattctggtagaaaagagtccatgtggtccaactggcaaaactt
ttgcataaatatatctccctttacaaggcagatgagagtttgaggcctac
tggccactacctcacccgaaatccactgccactacacactttcatttatg
tggtgggctttctgcttgctcttactgttcaaattgcccctggggctcat
tgaaggctcataaagagagacctagggcagcaatcatccaggcatggaga
aatgagaccccctaaaatagaatttgcctttgtgaattaatatattcagg
taaaatccaaccccaccatacttaataagtatagacaattcattttgttt
ctatatgtctatatgctatgagggtttttttgtttgcttgttttgttttg
ttacatagagagatctctttcacactaccacattgtatctaggggttaat
tgtggtggctaattttatcactttgccacaaaatggattcacctaggaag
agggaccctcagtcaaagaaattaactccaatagacctgcccttgtgggc
atgtatgtatgggaacatttttcttgatttgatgccagaggggccaggcc
cactgtgtgttcaatgccaacttccggcatagatagctctctagaatgga
attaacaaagcatggtttgaaataagttcatgccctagcagccacttatt
ttaattcaactgcttctcttaaatttacgtta
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_9774338_9775326
seq2: B6Ng01-185J18.b_204_1222

seq1  CAGTATTTTTGTACTGGTTTCTAAGCTATCTACATAAATCCAAAATATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATTTTTGTACTGGTTTCTAAGCTATCTACATAAATCCAAAATATTC  50

seq1  TCTCTGAGAGAGCATTTTCAAGAAAGGAGAAACTAATATATCCACTTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGAGAGAGCATTTTCAAGAAAGGAGAAACTAATATATCCACTTTTA  100

seq1  AAGCTAATCATTTTCAGTTATTCACAATTGCTCTGTTCCTGTCTGGATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTAATCATTTTCAGTTATTCACAATTGCTCTGTTCCTGTCTGGATGG  150

seq1  TCACTGGAGACTCTGGCACCCAAGTACCATAGGCTGTCCTGTCAAGTATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGGAGACTCTGGCACCCAAGTACCATAGGCTGTCCTGTCAAGTATA  200

seq1  ATAAGTACGATTCTGTTCAAGTTCAAGGGGGGCCACACAGCTGTAGGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTACGATTCTGTTCAAGTTCAAGGGGGGCCACACAGCTGTAGGTTG  250

seq1  GCTCTCAGCCATACCAGCTATCCCCAGAACAGCCTTCCTAAAGTATTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCAGCCATACCAGCTATCCCCAGAACAGCCTTCCTAAAGTATTCTG  300

seq1  GTAGAAAAGAGTCCATGTGGTCCAACTGGCAAAACTTTTGCATAAATATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAAAAGAGTCCATGTGGTCCAACTGGCAAAACTTTTGCATAAATATA  350

seq1  TCTCCCTTTACAAGGCAGATGAGAGTTTGAGGCCTACTGGCCACTACCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTTTACAAGGCAGATGAGAGTTTGAGGCCTACTGGCCACTACCTC  400

seq1  ACCCGAAATCCACTGCCACTACACACTTTCATTTATGTGGTGGGCTTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCGAAATCCACTGCCACTACACACTTTCATTTATGTGGTGGGCTTTCT  450

seq1  GCTTGCTCTTACTGTTCAAATTGCCCCTGGGGCTCATTGAAGGCTCATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCTCTTACTGTTCAAATTGCCCCTGGGGCTCATTGAAGGCTCATAA  500

seq1  AGAGAGACCTAGGGCAGCAATCATCCAGGCATGGAGAAATGAGACCCCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGACCTAGGGCAGCAATCATCCAGGCATGGAGAAATGAGACCCCCT  550

seq1  AAAATAGAATTTGCCTTTGTGAATTAATATATTCAGGTAAAATCCAA-CC  599
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAAATAGAATTTGCCTTTGTGAATTAATATATTCAGGTAAAATCCAACCC  600

seq1  CACCATACTTAATAAGTATAGACAATTCA-TTTGTTTCTATATGTCTATA  648
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CACCATACTTAATAAGTATAGACAATTCATTTTGTTTCTATATGTCTATA  650

seq1  TGCTATGAGGG-TTTTTTGTTTGCTTGTTTTGTTTTGTTACATAGAGAGA  697
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TGCTATGAGGGTTTTTTTGTTTGCTTGTTTTGTTTTGTTACATAGAGAGA  700

seq1  TCTC-TTCACACTACCACATTGTATCTAGGGGTTAATTGTGTTGGCTAAT  746
      |||| |||||||||||||||||||||||||||||||||||| ||||||| 
seq2  TCTCTTTCACACTACCACATTGTATCTAGGGGTTAATTGTGGTGGCTAA-  749

seq1  TTTTATCACTTTGCCACAAAAT-GAATCACCTAGGAAGAGGGACCCTCAG  795
      |||||||||||||||||||||| || ||||||||||||||||||||||||
seq2  TTTTATCACTTTGCCACAAAATGGATTCACCTAGGAAGAGGGACCCTCAG  799

seq1  TCAAAG-AATTAACTCCAATAGA-CTG-CCTTGTGGGCATGTATGTA--G  840
      |||||| |||||||||||||||| ||| |||||||||||||||||||  |
seq2  TCAAAGAAATTAACTCCAATAGACCTGCCCTTGTGGGCATGTATGTATGG  849

seq1  GGACA-TTTTCTTGA-TTGATGCAGGAGGGGCCA-GCCCAC--TGTGGTC  885
      | ||| ||||||||| |||||||  ||||||||| ||||||  |||| ||
seq2  GAACATTTTTCTTGATTTGATGCCAGAGGGGCCAGGCCCACTGTGTGTTC  899

seq1  AATGCC-ACTT-CTGCATAGATAG--CTCTAGATTG--AATAACAAAGCA  929
      |||||| |||| | ||||||||||  ||||||| ||  | ||||||||||
seq2  AATGCCAACTTCCGGCATAGATAGCTCTCTAGAATGGAATTAACAAAGCA  949

seq1  TG--TTG-AATAAG-TCATGCC--AGCAAGCCACTTATTT--AATCA--T  969
      ||  ||| |||||| |||||||  ||| ||||||||||||  | |||  |
seq2  TGGTTTGAAATAAGTTCATGCCCTAGC-AGCCACTTATTTTAATTCAACT  998

seq1  GCTCCT-TTAAATTTACGTTA  989
      ||| || ||||||||||||||
seq2  GCTTCTCTTAAATTTACGTTA  1019