BAC Information

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BAC

Clone NameB6Ng01-186M15
Chromosome12 (Build37)
Map Location 85,696,808 - 85,834,134
singlet/doubletdoublet
Overlap gene9830169C18Rik, Coq6, Entpd5, 2900006K08Rik, Rnf113a2, Aldh6a1, Lin52
Upstream geneDpf3, Wdr21, Zfyve1, LOC626950, Rbm25, Psen1, Papln, Numb, LOC100042325, 2410016O06Rik, Acot2, Acot1, Acot4, Acot3, Acot5, LOC666963, Acot6, Dnalc1, Pnma1, C130039O16Rik, EG432676, Zadh1, Zfp410
Downstream geneChx10, Abcd4, 7420416P09Rik, Tmem90a, Npc2, Isca2, Ltbp2, 1110018G07Rik, Fcf1, Ylpm1, Prox2, Dlst, Rps6kl1, LOC100042021, Pgf, Eif2b2, Mlh3, Acyp1, 2810002I04Rik, Nek9, Tmed10, LOC100042549, LOC667119, Fos
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186M15.bB6Ng01-186M15.g
ACCGA011541GA011542
length1,1181,090
definitionB6Ng01-186M15.b B6Ng01-186M15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,833,011 - 85,834,134)(85,696,808 - 85,697,896)
sequence
gaattcttccagagatgcttatgtacttaacacccaaggtctagcacact
gcttttcaaagcagcccataataaatgtcctacttattatctttattata
atatacacatcttaagaaatagatgttaacccttggtaggatctcagtta
ctaaaatatgagggaaaatcagaagataatttaagtccattttgaaaaat
agggaaaggagaagtgaaaaagacctcataacttgacgaataataaaatc
agtatactttaagagaaacatgcttataagtctctgtcacaacccttcac
gactcttggacaaggtttttctccccctcccccatacagcttaaaaattg
agacattactcacatattgtaaaaacaggacctctctttttttttttttt
ttttaaagatttatttatttattatatgtaagtacactgtagctgtcttc
agacactccagaagagggagtcagatcttgttacggatggttgtgagcca
ccatgtggttgctgggatttgaactcctgacctttggaagagcagtcggg
tgctcttacccactgagccatctcaccagccccaggacctctctttttaa
agttatagtgaactacacacaaaactcaccattgtgcactttaaaatgca
aaattcatctgttatcattaggatcaattagtgtcaaacaaaactttttc
accctctgcaactgaaaccattaaaaatcattaagcaacaactgtttttt
ctcctcccagctggcacccaccgggttgcttttgtgtctatgggtctgat
ctttttgtttgtttggtttggttgtttttttttttaagacagggtttctc
tgtgtagccctggctgtcctggaactcaggctgggcttgaagtcagaaat
ccgcctgcttctgcctcctgagtgctgggattaaagtgcgccaccactgc
ctggctaccagcttcattcttgataaaattggaagacagacagacacaga
cacacacacacacacagctaattaagtggctcagttggtaaaagcactgc
tgtgtcaagcctgatgactaagtcgatcctgacgccacacgaatgccaag
aactagctctaaatgtct
gaattcctgcagcacctctgggaacaccagcccacaggtagccagagatg
ccaaggttatccttaccctggagtttgtcgccaagggctggttctagaat
ggacttggggatcttcctagaagtggccttctttggggagaccttggtct
gagccacagcagccgagtctctctgtggagcgtcttccttttgctgttct
ttcttctcaaggaagctgaagggcttcaaggaggagagaaggagttcctt
tctcttccgaatcccagcgcgcctccttgcctctctgcgctccatgatct
cctgatagaggggcaggtagacgtgtgccggcacaggctgggcccggaac
tgccgatggcactccgcctcttcctcgccctgcttctgggcctgtagcct
ttcctgctcaaaagaggcaggtgaggccagccactgggccttcttccggg
cctcacgcagtgtcatgcggaatggctgagggacggtgatggaagatgcc
caagagcaaacacttctgtgctgggagggaggcccagagtctgaggttgg
caggatccgagccttgggaatgtcagagggaaggctagtcatggagctgc
agcgcctcatggagccatgcctggggagagagtggttctgtgtggaccca
gcaaacaggaggtgaggttcctcccagagaccctcctccatttcctccct
gcccagcagatcgtaaccaagagacttcttagtcttgatcccaaagcccc
aaaggcctctaagtttttaaccctatcagctaggtttcccttcttgctac
aacacaggcactcctagcagcccaacaggaactatctaagaattcataca
ggaattgccacttgcattctgataactgcattacagtgtagtcggctagc
acagggccaccgagtcagaagaatccaattggaacgtcaggtttttggat
ttcccatgtagagttggcagagatcttactcacttataaggtccactggg
aagggagtaccattacatttggtaaggcagtgtgtgtcatgacagccttg
aagcctttggagagctgtaactggaagtcaagagtttggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_85833011_85834134
seq2: B6Ng01-186M15.b_48_1165 (reverse)

seq1  AGACAATTTAGAGCTTGTGCTGTGCA-TCGTGTGGCGTCCAGGGATCGAA  49
      |||| |||||||||| || ||  ||| ||||||||||||   |||||| |
seq2  AGAC-ATTTAGAGCTAGTTCTTGGCATTCGTGTGGCGTC--AGGATCG-A  46

seq1  CTTAAGTCATCAGGCTTGACACAGCAAGTGCTTTTACCCACTGAGCCACT  99
      ||| ||||||||||||||||||||| |||||||||||| |||||||||||
seq2  CTT-AGTCATCAGGCTTGACACAGC-AGTGCTTTTACCAACTGAGCCACT  94

seq1  TAATTAGCCTGTGTGTGTGTGTGTGTCTGTGTCTGTCTGTCTTCCAATTT  149
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAG-CTGTGTGTGTGTGTGTGTCTGTGTCTGTCTGTCTTCCAATTT  143

seq1  TATCAAGAATGAAGCTGGTAGCCAGGCAGTGGTGGCGCACTTTAATCCCA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAGAATGAAGCTGGTAGCCAGGCAGTGGTGGCGCACTTTAATCCCA  193

seq1  GCACTCAGGAGGCAGAAGCAGGCGGATTTCTGACTTCAAGGCCAGCCTGA  249
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GCACTCAGGAGGCAGAAGCAGGCGGATTTCTGACTTCAAGCCCAGCCTGA  243

seq1  GTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTTAAAAAAAAAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTTAAAAAAAAAA  293

seq1  ACAACCAAACCAAACAAACAAAAAGATCAGACCCATAGACACAAAAGCAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCAAACCAAACAAACAAAAAGATCAGACCCATAGACACAAAAGCAA  343

seq1  CCCGGTGGGTGCCAGCTGGGAGGAGAAAAAACAGTTGTTGCTTAATGATT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGGTGGGTGCCAGCTGGGAGGAGAAAAAACAGTTGTTGCTTAATGATT  393

seq1  TTTAATGGTTTCAGTTGCAGAGGGTGAAAAAGTTTTGTTTGACACTAATT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGGTTTCAGTTGCAGAGGGTGAAAAAGTTTTGTTTGACACTAATT  443

seq1  GATCCTAATGATAACAGATGAATTTTGCATTTTAAAGTGCACAATGGTGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTAATGATAACAGATGAATTTTGCATTTTAAAGTGCACAATGGTGA  493

seq1  GTTTTGTGTGTAGTTCACTATAACTTTAAAAAGAGAGGTCCTGGGGCTGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTGTGTAGTTCACTATAACTTTAAAAAGAGAGGTCCTGGGGCTGG  543

seq1  TGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCAAAGGTCAGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCAAAGGTCAGG  593

seq1  AGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACAAGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACAAGA  643

seq1  TCTGACTCCCTCTTCTGGAGTGTCTGAAGACAGCTACAGTGTACTTACAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACTCCCTCTTCTGGAGTGTCTGAAGACAGCTACAGTGTACTTACAT  693

seq1  ATAATAAATAAATAAATCTTTAAAAAAAAAAAAAAAAAAGAGAGGTCCTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAAATAAATAAATCTTTAAAAAAAAAAAAAAAAAAGAGAGGTCCTG  743

seq1  TTTTTACAATATGTGAGTAATGTCTCAATTTTTAAGCTGTATGGGGGAGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTACAATATGTGAGTAATGTCTCAATTTTTAAGCTGTATGGGGGAGG  793

seq1  GGGAGAAAAACCTTGTCCAAGAGTCGTGAAGGGTTGTGACAGAGACTTAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAAAAACCTTGTCCAAGAGTCGTGAAGGGTTGTGACAGAGACTTAT  843

seq1  AAGCATGTTTCTCTTAAAGTATACTGATTTTATTATTCGTCAAGTTATGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATGTTTCTCTTAAAGTATACTGATTTTATTATTCGTCAAGTTATGA  893

seq1  GGTCTTTTTCACTTCTCCTTTCCCTATTTTTCAAAATGGACTTAAATTAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTTTTCACTTCTCCTTTCCCTATTTTTCAAAATGGACTTAAATTAT  943

seq1  CTTCTGATTTTCCCTCATATTTTAGTAACTGAGATCCTACCAAGGGTTAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGATTTTCCCTCATATTTTAGTAACTGAGATCCTACCAAGGGTTAA  993

seq1  CATCTATTTCTTAAGATGTGTATATTATAATAAAGATAATAAGTAGGACA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTATTTCTTAAGATGTGTATATTATAATAAAGATAATAAGTAGGACA  1043

seq1  TTTATTATGGGCTGCTTTGAAAAGCAGTGTGCTAGACCTTGGGTGTTAAG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTATGGGCTGCTTTGAAAAGCAGTGTGCTAGACCTTGGGTGTTAAG  1093

seq1  TACATAAGCATCTCTGGAAGAATTC  1124
      |||||||||||||||||||||||||
seq2  TACATAAGCATCTCTGGAAGAATTC  1118

seq1: chr12_85696808_85697896
seq2: B6Ng01-186M15.g_65_1154

seq1  GAATTCCTGCAGCACCTCTGGGAACACCAGCCCACAGGTAGCCAGAGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGCAGCACCTCTGGGAACACCAGCCCACAGGTAGCCAGAGATG  50

seq1  CCAAGGTTATCCTTACCCTGGAGTTTGTCGCCAAGGGCTGGTTCTAGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGTTATCCTTACCCTGGAGTTTGTCGCCAAGGGCTGGTTCTAGAAT  100

seq1  GGACTTGGGGATCTTCCTAGAAGTGGCCTTCTTTGGGGAGACCTTGGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTGGGGATCTTCCTAGAAGTGGCCTTCTTTGGGGAGACCTTGGTCT  150

seq1  GAGCCACAGCAGCCGAGTCTCTCTGTGGAGCGTCTTCCTTTTGCTGTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCACAGCAGCCGAGTCTCTCTGTGGAGCGTCTTCCTTTTGCTGTTCT  200

seq1  TTCTTCTCAAGGAAGCTGAAGGGCTTCAAGGAGGAGAGAAGGAGTTCCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTCAAGGAAGCTGAAGGGCTTCAAGGAGGAGAGAAGGAGTTCCTT  250

seq1  TCTCTTCCGAATCCCAGCGCGCCTCCTTGCCTCTCTGCGCTCCATGATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCCGAATCCCAGCGCGCCTCCTTGCCTCTCTGCGCTCCATGATCT  300

seq1  CCTGATAGAGGGGCAGGTAGACGTGTGCCGGCACAGGCTGGGCCCGGAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATAGAGGGGCAGGTAGACGTGTGCCGGCACAGGCTGGGCCCGGAAC  350

seq1  TGCCGATGGCACTCCGCCTCTTCCTCGCCCTGCTTCTGGGCCTGTAGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCGATGGCACTCCGCCTCTTCCTCGCCCTGCTTCTGGGCCTGTAGCCT  400

seq1  TTCCTGCTCAAAAGAGGCAGGTGAGGCCAGCCACTGGGCCTTCTTCCGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGCTCAAAAGAGGCAGGTGAGGCCAGCCACTGGGCCTTCTTCCGGG  450

seq1  CCTCACGCAGTGTCATGCGGAATGGCTGAGGGACGGTGATGGAAGATGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACGCAGTGTCATGCGGAATGGCTGAGGGACGGTGATGGAAGATGCC  500

seq1  CAAGAGCAAACACTTCTGTGCTGGGAGGGAGGCCCAGAGTCTGAGGTTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGCAAACACTTCTGTGCTGGGAGGGAGGCCCAGAGTCTGAGGTTGG  550

seq1  CAGGATCCGAGCCTTGGGAATGTCAGAGGGAAGGCTAGTCATGGAGCTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATCCGAGCCTTGGGAATGTCAGAGGGAAGGCTAGTCATGGAGCTGC  600

seq1  AGCGCCTCATGGAGCCATGCCTGGGGAGAGAGTGGTTCTGTGTGGACCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGCCTCATGGAGCCATGCCTGGGGAGAGAGTGGTTCTGTGTGGACCCA  650

seq1  GCAAACAGGAGGTGAGGTTCCTCCCAGAGACCCTCCTCCATTTCCTCCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACAGGAGGTGAGGTTCCTCCCAGAGACCCTCCTCCATTTCCTCCCT  700

seq1  GCCCAGCAGATCGTAACCAAGAGACTTCTTAGTCTTGATCCCAAAGCCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGCAGATCGTAACCAAGAGACTTCTTAGTCTTGATCCCAAAGCCCC  750

seq1  AAAGGCCTCTAAGTTTTTAACCCTATCAGCTAGGTTTCCCTTCTTGCTAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCCTCTAAGTTTTTAACCCTATCAGCTAGGTTTCCCTTCTTGCTAC  800

seq1  AACACAGGCACTCCTAGCAGCCCAACAGGAACTATCTAAGAATTCATACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAGGCACTCCTAGCAGCCCAACAGGAACTATCTAAGAATTCATACA  850

seq1  GGAATTGCCACTTGCATTCTGATAACTGCA-TACAGTGTAGTCGGCTAGC  899
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GGAATTGCCACTTGCATTCTGATAACTGCATTACAGTGTAGTCGGCTAGC  900

seq1  ACAGGGCCACCGAGTCAGAAGGATCCAATTGGAACGTCAGGTTTTTGGAT  949
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ACAGGGCCACCGAGTCAGAAGAATCCAATTGGAACGTCAGGTTTTTGGAT  950

seq1  TTCCCATGTAGAG-TGGCAGAGATCTTACCCACTTATAAGGT-CACTGGG  997
      ||||||||||||| ||||||||||||||| |||||||||||| |||||||
seq2  TTCCCATGTAGAGTTGGCAGAGATCTTACTCACTTATAAGGTCCACTGGG  1000

seq1  AAGGGAGTA-CATTACATTTGGTAAAGGCAGTGTGGTGGCATGACAGGCC  1046
      ||||||||| ||||||||||||| |||||||||| ||| |||||||| | 
seq2  AAGGGAGTACCATTACATTTGGT-AAGGCAGTGT-GTGTCATGACAGCCT  1048

seq1  TGAAGCCTTT-GAGAGCTGTAACTGGGAAGTTCAAGAGTTTGGG  1089
      |||||||||| ||||||||||||| ||||| |||||||||||||
seq2  TGAAGCCTTTGGAGAGCTGTAACT-GGAAG-TCAAGAGTTTGGG  1090