BAC Information

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BAC

Clone NameB6Ng01-188K12
Chromosome12 (Build37)
Map Location 63,992,807 - 63,993,999
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040403, LOC665713, LOC622746, LOC100040438, 1700047L15Rik, Tspyl-ps, EG665741
Downstream geneEG382606
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-188K12.bB6Ng01-188K12.g
ACCGA012897GA012898
length1,2021,204
definitionB6Ng01-188K12.b B6Ng01-188K12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatctatcagagcattcgcgatgagataactagatgattcccaaa
atctagtgaaatctctgaagtctcaggatgaatatcaatctcagttataa
ataaagtacccgatacaaaggaaggcttttccaaaggcatactagagagc
actcaagtactgtggggagccgccctcacatttgccattacaagatggcg
ctgacatcctgtgttctaagtggtaaacaaataatctgcacatgtgccaa
gggtagttctccactccatgtgctctgccttccccgtgacgacaactcgg
ccaatgggctgcagccaatcagggagcgacacgtcctaggcagaggataa
ttctccttaaaagggacggggtttcgccattttctctcttgctcctgaat
atgtaagcaataaagcttttgctgcagaagattccggtttgttgcgtctt
tcctggccggttgcgaacacacgtaagaaagtacgtgttttctttgtcag
aattagatataaaataaactgtaattcctaaatgtatagagtcaaacagc
tgtagctatgtttattttgtagagcagataaattctctttggattataaa
cttcctggaatgcccagtacacagaatgattcaatggggtctaagtaact
gaatgaatatacagacaaaattacattaaagttagattatagcacaatgt
cccaactgaaagaaaaagtttacaagcattgtgataatattatcaaaaat
atctaagacatggataaaaaaaggccctttaacctgtgataaaatctaaa
atcatttttgtttgtttgtttttggttttgttttgttttgttttgttttg
ttttttcgagacagggtttctctgtgtagccctggctgtcctgggaactc
acttttgtagaccaggctggtagaaatccacctgcctctgcctcccgagt
gctggattaaaaggcgtgtgctaccacacctgacaaaatcttaaaatctt
aattacttgaaaagaaattgggaattaaataaaggcaaattaatgtcaat
agaaaagaactattaaaacaataagaaaaaatctgacttcagtgagaaaa
atgtagaatataaaaaatgacacacgtacgtgggctgagaaagctgctcc
tgtaagtagagcagtgtctcttcttccaggactggagtgtccttctctgc
cc
gaattcaaaaaagaacagcttccctccaataatataatgaggtatctgga
ttgacattaggatcttctttttaagtagacatactctaacatagagatgt
tcaaaaaatgtaaggcaagaatatgatcagttaagcatctgaaagtgagt
acaaatactaagttgactctgtcatttatatagctgtttgtagaacttac
aaccaatagcatcagctgtccatgaagaaacaaatttcatttcagttttg
tatttttgtttctttgttttcttttcccttccatatttcatttcacgtga
tatatttaagctgcttaataagcctgctttgggaataaaaataagtaaat
aaataactgcacagcataggaaattattagctgagtgaagatatagccta
caaaatggaaagaaaaatattgtcaaaagattaatgtctcaaatatatgt
aatctcaaaaattaaatatcacagaatggacaacacattcattaaccaga
aacatatgattttttcatattatatattttattttatttatgaatttatt
cactgcaaatcccattagtagcctaccctctctcctttcttctcagtcct
accctcacaaatcagtatactctctccttctcagaggagaggaaatccca
cctagagtacctacctgccttgggacctcaagtcaagacacagaaagact
aagtacatcctctcccattgaggcccaatgaggcagtcctgctaaggaac
accagacaggcagcagtcagagacagcctccctctccaattgttagggga
cctacaagaagacaaagttccacatctgttacaaatgataggggggctgt
ttccatctgctgcatgctctttaattggttcaatctctcccatgggccca
ggatagttcattctgtagtcttcttttggtgactttgagccttccagctc
tctcattccatcctacaaactttcacatgataccacaagtcaccctgatc
ctgctgtgttctctgcctatgttttccttccaccactggaataaaacctc
tcacgagaacagtgtgctatgttccttgttgtaatcattagcaaatttat
aaataggtttcacagttgccttctcttcaattgtaatgactccaaggttt
gaccactcttggatgtccattaacttcaaatctctctcggtctgctccac
tcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_63992807_63993999
seq2: B6Ng01-188K12.b_46_1247

seq1  GAATTCATCTATCAGAGCATTCGCGATGAGATAACTAGATGATTCCCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTATCAGAGCATTCGCGATGAGATAACTAGATGATTCCCAAA  50

seq1  ATCTAGTGAAATCTCTGAAGTCTCAGGATGAATATCAATCTCAGTTATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGTGAAATCTCTGAAGTCTCAGGATGAATATCAATCTCAGTTATAA  100

seq1  ATAAAGTACCCGATACAAAGGAAGGCTTTTCCAAAGGCATACTAGAGAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGTACCCGATACAAAGGAAGGCTTTTCCAAAGGCATACTAGAGAGC  150

seq1  ACTCAAGTACTGTGGGGAGCCGCCCTCACATTTGCCATTACAAGATGGCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAGTACTGTGGGGAGCCGCCCTCACATTTGCCATTACAAGATGGCG  200

seq1  CTGACATCCTGTGTTCTAAGTGGTAAACAAATAATCTGCACATGTGCCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACATCCTGTGTTCTAAGTGGTAAACAAATAATCTGCACATGTGCCAA  250

seq1  GGGTAGTTCTCCACTCCATGTGCTCTGCCTTCCCCGTGACGACAACTCGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAGTTCTCCACTCCATGTGCTCTGCCTTCCCCGTGACGACAACTCGG  300

seq1  CCAATGGGCTGCAGCCAATCAGGGAGCGACACGTCCTAGGCAGAGGATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGGGCTGCAGCCAATCAGGGAGCGACACGTCCTAGGCAGAGGATAA  350

seq1  TTCTCCTTAAAAGGGACGGGGTTTCGCCATTTTCTCTCTTGCTCCTGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTTAAAAGGGACGGGGTTTCGCCATTTTCTCTCTTGCTCCTGAAT  400

seq1  ATGTAAGCAATAAAGCTTTTGCTGCAGAAGATTCCGGTTTGTTGCGTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAGCAATAAAGCTTTTGCTGCAGAAGATTCCGGTTTGTTGCGTCTT  450

seq1  TCCTGGCCGGTTGCGAACACACGTAAGAAAGTACGTGTTTTCTTTGTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGCCGGTTGCGAACACACGTAAGAAAGTACGTGTTTTCTTTGTCAG  500

seq1  AATTAGATATAAAATAAACTGTAATTCCTAAATGTATAGAGTCAAACAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGATATAAAATAAACTGTAATTCCTAAATGTATAGAGTCAAACAGC  550

seq1  TGTAGCTATGTTTATTTTGTAGAGCAGATAAATTCTCTTTGGATTATAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCTATGTTTATTTTGTAGAGCAGATAAATTCTCTTTGGATTATAAA  600

seq1  CTTCCTGGAATGCCCAGTACACAGAATGATTCAATGGGGTCTAAGTAACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTGGAATGCCCAGTACACAGAATGATTCAATGGGGTCTAAGTAACT  650

seq1  GAATGAATATACAGACAAAATTACATTAAAGTTAGATTATAGCACAATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAATATACAGACAAAATTACATTAAAGTTAGATTATAGCACAATGT  700

seq1  CCCAACTGAAAGAAAAAGTTTACAAGCATTGTGATAATATTATCAAAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACTGAAAGAAAAAGTTTACAAGCATTGTGATAATATTATCAAAAAT  750

seq1  ATCTAAGACATGGATAAAAAAAGGCCCTTTAACCTGTGATAAAATCTAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAGACATGGATAAAAAAAGGCCCTTTAACCTGTGATAAAATCTAAA  800

seq1  ATCATTTTTGTTTGTTTGTTTTTGGTTTTGTTTTGTTTTGTTTTGTTTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTTTGTTTGTTTGTTTTTGGTTTTGTTTTGTTTTGTTTTGTTTTG  850

seq1  TTTTTTCGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCT-GGAACTC  899
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTTTTTCGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGGAACTC  900

seq1  AC-TTTGTAGACCAGGCTGGTAGAAATCCACCTGCCTCTGCCTCCCGAGT  948
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTGTAGACCAGGCTGGTAGAAATCCACCTGCCTCTGCCTCCCGAGT  950

seq1  GCTGGGATTAAAGGCGTGTGCTACCACACCTGACAAAATC-TAAAATCTT  997
      |||||  | ||||||||||||||||||||||||||||||| |||||||||
seq2  GCTGGATTAAAAGGCGTGTGCTACCACACCTGACAAAATCTTAAAATCTT  1000

seq1  AA-TACTTGAAAAGAAATTTGGAATTAAATAAAGGC-AATTAATGTCAAT  1045
      || |||||||||||||||| |||||||||||||||| |||||||||||||
seq2  AATTACTTGAAAAGAAATTGGGAATTAAATAAAGGCAAATTAATGTCAAT  1050

seq1  AGAAAAGAACTATTTAAAAACAATAAG-AAAAATCTGACTTCAGTGAGGA  1094
      ||||||||||||||  ||||||||||| ||||||||||||||||||| ||
seq2  AGAAAAGAACTATT--AAAACAATAAGAAAAAATCTGACTTCAGTGA-GA  1097

seq1  AAAATGTAG---ATATAAAATG--ACACGTACGTGGGCTG-GAGAGCTGC  1138
      |||||||||   ||| ||||||  |||||||||||||||| || ||||||
seq2  AAAATGTAGAATATAAAAAATGACACACGTACGTGGGCTGAGAAAGCTGC  1147

seq1  T-CTGTAGTTAAGAGCAGTGTCTCTTCTTCCAGGGACTTG-GCGTGCTTC  1186
      | |||||  | ||||||||||||||||||||| ||||| | | || ||||
seq2  TCCTGTAAGT-AGAGCAGTGTCTCTTCTTCCA-GGACTGGAGTGTCCTTC  1195

seq1  TCTGCCC  1193
      |||||||
seq2  TCTGCCC  1202