BAC Information

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BAC

Clone NameB6Ng01-188L10
Chromosome12 (Build37)
Map Location 26,481,383 - 26,482,559
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668719, Mboat2, EG629397, C330002I19Rik, Id2, LOC100042973, LOC100042974
Downstream geneLOC668726, Rnf144, Rsad2, Tyki, LOC668731, 1700020D12Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-188L10.bB6Ng01-188L10.g
ACCGA012939GA012940
length1,1811,142
definitionB6Ng01-188L10.b B6Ng01-188L10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagttaatggacataagctatgaaacagatagaaatcaaattgat
tttctgtcattttttatttgtttttttgtgagggataagtgcataaaata
tattaaatattgaaatatacaatccattgtgaagttccatggcttcaaaa
tcactattcaaacagtatagaacttcactaggatgcacagatgtgagtct
gggtatttttttgctgtgtacagtttttgttatttgtttttttatttttt
tttaatttgcagggttttctttaaaatagtaaagtttagaaaattaaaat
acagataattaaaatatagaaaataaacgaaaaatgccagtattctgaag
agtcattttctgacactgtgataaaaatcctcgagatgagtgattcataa
gcagaaagaggttatttagctcagagctaatggccaggtctaagattatt
tgactcaggtgttattgagcctgcagggccgaacaggattcatgatcaca
gcgagtgcagcctctgatgtagaggagtctggggagcaaacagagagaga
ggaaggaaccaaagggccaacatcttttcggagctagctttttctaagct
ccctctaaaatgttcaagtacattctcctttggggaacatttaagatgta
acccataacattaagtataaattataaccgtggagcaacccatacttctt
gagaaaagatgactccagtttgaagatcggcttccacctgacccttccct
ggaatccacatggtgacacgaggcttcctaacaatgaccgggccctttca
acatcatttcttcttcttctctcttttctattatagaccatttttcttta
acatagaatttgctttcattaaatgcttaatttgacaataaatgtagcta
aagggagaactcatggctttacctgtgattaggttagtctttaaaaattg
ttttcgctcagaaagaaggcaatgaatttcatcttattaaaaatggtata
aacttctatgacttcaatctgactctacctaaatatgattggattgggtg
gtgtctggagtgaggcattcatggctcccttaccacattttcggtctggt
ggatctgatatgcccatgatttaaagggaagaacgccgccgtagccaggt
gcaccggatgatcagttccattgggcacccc

gaattctctacttagctctgtaccccatttttattggattatttgtgttg
ttggtgtctaacttcttgagttctttatatattttggatattagcccttt
gttggattatagagttagtgaagattttccccattctgtagggtgctgtt
tggtcttactgatggaatcttttgccttactgatgctttttagtattgtt
agatcctatttattaattgttgattttagtacttaagctattagtgttct
gttcaggatgttgtctcctgtaccgatccattcaaaggtgttccccactt
tctctcctattagattcagggtatctggttttatgttgaggtctttgatc
tacttggacttgacttttattcagggtaataaatatggatctatttgcat
tcttctacatgcagacatccacttaagccagcaccatttgctgaagaccc
tttctttttccattgtatggttttggcttctttgtcaaaaatcaagtgtc
catatgtatgtgcttttatttctgggtctttgattcaattgcattgatca
acctgtctggttctataccaataccatgcagattttatcaccatcgtact
gtagtacatcttgaggtcaggatagtgattcctccaaaagttcttttatt
ggtctggattgttttggctatcctgggtttttgtttgtttgtttgtttgt
ttgttctgtttttccatatgaagttgaaaattgttcttttcaaagtctgt
aaagaattgtgttggaatttcgacagggattgcattgattctttagattg
cttttggttagaccacccatttcttactatgttaatcctactgatccatg
agcatgggagatcttctcatcttctgatatcttcttcaatttctttcttc
agaaaacatgaagttctttgtcatataggcctttcacttgcttacttaaa
ggtaccagcaaaattattttatattaatttgtggctatggtgaaagataa
ttgtttttttggttctttcccaagcccattcattaattgtataaagaatg
gctgctgacttttttgttcgaaattaaatttgattccagcaccttgctga
cgttgtcaatcacgctgcaagaagttcctgtatacaagattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_26481383_26482559
seq2: B6Ng01-188L10.b_46_1226

seq1  GAATTCAGTTAATGGACATAAGCTATGAAACAGATAGAAATCAAATTGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTAATGGACATAAGCTATGAAACAGATAGAAATCAAATTGAT  50

seq1  TTTCTGTCATTTTTTATTTGTTTTTTTGTGAGGGATAAGTGCATAAAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTCATTTTTTATTTGTTTTTTTGTGAGGGATAAGTGCATAAAATA  100

seq1  TATTAAATATTGAAATATACAATCCATTGTGAAGTTCCATGGCTTCAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAATATTGAAATATACAATCCATTGTGAAGTTCCATGGCTTCAAAA  150

seq1  TCACTATTCAAACAGTATAGAACTTCACTAGGATGCACAGATGTGAGTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTATTCAAACAGTATAGAACTTCACTAGGATGCACAGATGTGAGTCT  200

seq1  GGGTATTTTTTTGCTGTGTACAGTTTTTGTTATTTGTTTTTTTATTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTATTTTTTTGCTGTGTACAGTTTTTGTTATTTGTTTTTTTATTTTTT  250

seq1  TTTAATTTGCAGGGTTTTCTTTAAAATAGTAAAGTTTAGAAAATTAAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTTGCAGGGTTTTCTTTAAAATAGTAAAGTTTAGAAAATTAAAAT  300

seq1  ACAGATAATTAAAATATAGAAAATAAACGAAAAATGCCAGTATTCTGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATAATTAAAATATAGAAAATAAACGAAAAATGCCAGTATTCTGAAG  350

seq1  AGTCATTTTCTGACACTGTGATAAAAATCCTCGAGATGAGTGATTCATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATTTTCTGACACTGTGATAAAAATCCTCGAGATGAGTGATTCATAA  400

seq1  GCAGAAAGAGGTTATTTAGCTCAGAGCTAATGGCCAGGTCTAAGATTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAAGAGGTTATTTAGCTCAGAGCTAATGGCCAGGTCTAAGATTATT  450

seq1  TGACTCAGGTGTTATTGAGCCTGCAGGGCCGAACAGGATTCATGATCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCAGGTGTTATTGAGCCTGCAGGGCCGAACAGGATTCATGATCACA  500

seq1  GCGAGTGCAGCCTCTGATGTAGAGGAGTCTGGGGAGCAAACAGAGAGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAGTGCAGCCTCTGATGTAGAGGAGTCTGGGGAGCAAACAGAGAGAGA  550

seq1  GGAAGGAACCAAAGGGCCAACATCTTTTCGGAGCTAGCTTTTTCTAAGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGAACCAAAGGGCCAACATCTTTTCGGAGCTAGCTTTTTCTAAGCT  600

seq1  CCCTCTAAAATGTTCAAGTACATTCTCCTTTGGGGAACATTTAAGATGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTAAAATGTTCAAGTACATTCTCCTTTGGGGAACATTTAAGATGTA  650

seq1  ACCCATAACATTAAGTATAAATTATAACCGTGGAGCAACCCATACTTCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATAACATTAAGTATAAATTATAACCGTGGAGCAACCCATACTTCTT  700

seq1  GAGAAAAGATGACTCCAGTTTGAAGATCGGCTTCCACCTGACCCTTCCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAAGATGACTCCAGTTTGAAGATCGGCTTCCACCTGACCCTTCCCT  750

seq1  GGAATCCACATGGTGACACGAGGCTTCCTAACAATGACCGGGCCCTTTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCCACATGGTGACACGAGGCTTCCTAACAATGACCGGGCCCTTTCA  800

seq1  ACATCATTTCTTCTTCTTCTCTCTTTTCTATTATAGACCATTTTTCTTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCATTTCTTCTTCTTCTCTCTTTTCTATTATAGACCATTTTTCTTTA  850

seq1  ACATAGAATTTGCTTTCATTAAATGCTTAATTTGACAATAAATGTAGCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGAATTTGCTTTCATTAAATGCTTAATTTGACAATAAATGTAGCTA  900

seq1  AAGGGAGAACTCATGGCTTTACCTGTGATTAGGTTAGTCTTTAAAAATTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAGAACTCATGGCTTTACCTGTGATTAGGTTAGTCTTTAAAAATTG  950

seq1  TTTTCGCTCAGAAAGAA-GCAATGAATTTCATCTATTAAAAAATGGTATA  999
      ||||||||||||||||| ||||||||||||||||  | ||||||||||||
seq2  TTTTCGCTCAGAAAGAAGGCAATGAATTTCATCTTATTAAAAATGGTATA  1000

seq1  AACTTCTATGACTTCAATCTGACTCTACCTAAAATATGATTGGATTGGGT  1049
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AACTTCTATGACTTCAATCTGACTCTACCT-AAATATGATTGGATTGGGT  1049

seq1  -GTGTCT-GAGTGAGGCATTCATGGCTCCCTACCAACATTT--CGTCTGG  1095
       |||||| |||||||||||||||||||||||  | ||||||   ||||||
seq2  GGTGTCTGGAGTGAGGCATTCATGGCTCCCTTACCACATTTTCGGTCTGG  1099

seq1  TGGGATCTGATATGCTCATGATTTAA--GGAGGACAGCCGCCGTAG-CAG  1142
      | ||||||||||||| ||||||||||  ||| ||  |||||||||| |||
seq2  T-GGATCTGATATGCCCATGATTTAAAGGGAAGAACGCCGCCGTAGCCAG  1148

seq1  GTGCACC-GATGATTTCAGAGTCCCATGGGCACCCC  1177
      ||||||| |||||  ||||  |||  ||||||||||
seq2  GTGCACCGGATGA--TCAG-TTCCATTGGGCACCCC  1181


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