BAC Information

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BAC

Clone NameB6Ng01-189C22
Chromosome12 (Build37)
Map Location 95,373,133 - 95,492,114
singlet/doubletdoublet
Overlap genenone
Upstream gene2610022K04Rik-ps, EG633639
Downstream geneLOC217786, LOC100039603
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-189C22.bB6Ng01-189C22.g
ACCGA013275GA013276
length927934
definitionB6Ng01-189C22.b B6Ng01-189C22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(95,373,133 - 95,374,059)(95,491,195 - 95,492,114)
sequence
gaattcaaaatgtgagatgtgaatatagaccgactataaagtcaaatctg
tcacagacatttaatcactgttccagtgtttgcttagctatcatgagatg
agataacttgttagaattcattgttctaatatgtgatcacgttattttat
acctcgacacaaaaaataaagttatacttgtttttagcaaaatatggaac
atatcaaggatctagttctcagcaagagatgtctgtggtttgttgtaaat
tttaccatagtacactcctgtcaaatcttgctctttatttggtggttgaa
taataaatcaagtctaaacttttggatttccatcatccgtttgtgttatt
tacagaattaggtgtactcagttctgcattttatgcaacagtaataatgc
aacagacaattgtaacactgtgtttttcaaaatgtgcatgaagaacagtt
aatgctctatttttccaaatgtcttttgaggatcaaccactcaagttttg
gaatcagataatcactaactgaaaaatatttaaaaaatggattgtgaaga
atgaataatctggaaatgaccactcgaacataaaatataagaaagagcaa
atatttatcctggagagagaaaaaaaagcagctaattccaaacattaaat
ttgccgttagatgagatatgagataaaggcttttgatttaatactcgtaa
ggagacagattaacatagttgttaaaagaagggatttattagaagttaaa
atatttctaaatgtatttttgtcaaacagatctgtgcccttgagcaatgc
tttagtaagtgtgagcaagcagacccaccaaaactcgctcattttattat
atcaaaaaccacatttagctctaaaatgtttgttctacaaggggactatg
gatagagagatgatggatggatggata

gaattcagagtaagaatttatgtgtgactatctgaacttcaagaaataat
tgtacagctaagcttctctattactgagttattatatgtcaagttaaaag
gctttttttgtttgtttgttttctggagggttgtttgtttttcttgttgt
tttattttatttttttgaatgcaaagaatcttttaaaaatctgtcatgtt
gccctcccatttgacaagaaagttatcctaacatatatgctgtcataacc
aagtcatcaaaatgcatggctgttaatcacttaagtaaaacagttgcttc
tggaagtttcagatggtggactatgttctgggatgttgaaagaatttaga
aaaaaaaaaagaatttagaagttcctatgaaggagggcaaaaaaatactt
gttgagtgagggaagacatttcaggagctagctgtgaaaacaaggatgtc
tatttatggaaatgctttccagttccttctcctaagcgtggatttcagaa
agagaaattacgtctttgggggtagaaggagcatcatttaggttttagat
tagctgctgctcccaaatctgttttgattggtttgtgtgaaatgacatgg
ttgtgcaatgaaatacaaattagacttaactggagtagattgcatttaaa
atgtatttggctgcacagtgaagttcaaccagagttcagtgggttcatgc
tagagggacacgaaaggctgggcacactatcatgtctgctgctgtgggtg
ggacttcgctgagacagatctttctggctccctaacaaaaggggatgtaa
tgttgaacataaacacgtttttccagcccgttgacttgaccatcctgccg
gatgcggttaattggaagccacctgagtatttgcttctagcctctgctac
ctctggccttgccttcagatgttgggttcactgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_95373133_95374059
seq2: B6Ng01-189C22.b_44_970

seq1  GAATTCAAAATGTGAGATGTGAATATAGACCGACTATAAAGTCAAATCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAATGTGAGATGTGAATATAGACCGACTATAAAGTCAAATCTG  50

seq1  TCACAGACATTTAATCACTGTTCCAGTGTTTGCTTAGCTATCATGAGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGACATTTAATCACTGTTCCAGTGTTTGCTTAGCTATCATGAGATG  100

seq1  AGATAACTTGTTAGAATTCATTGTTCTAATATGTGATCACGTTATTTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAACTTGTTAGAATTCATTGTTCTAATATGTGATCACGTTATTTTAT  150

seq1  ACCTCGACACAAAAAATAAAGTTATACTTGTTTTTAGCAAAATATGGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCGACACAAAAAATAAAGTTATACTTGTTTTTAGCAAAATATGGAAC  200

seq1  ATATCAAGGATCTAGTTCTCAGCAAGAGATGTCTGTGGTTTGTTGTAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCAAGGATCTAGTTCTCAGCAAGAGATGTCTGTGGTTTGTTGTAAAT  250

seq1  TTTACCATAGTACACTCCTGTCAAATCTTGCTCTTTATTTGGTGGTTGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCATAGTACACTCCTGTCAAATCTTGCTCTTTATTTGGTGGTTGAA  300

seq1  TAATAAATCAAGTCTAAACTTTTGGATTTCCATCATCCGTTTGTGTTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAATCAAGTCTAAACTTTTGGATTTCCATCATCCGTTTGTGTTATT  350

seq1  TACAGAATTAGGTGTACTCAGTTCTGCATTTTATGCAACAGTAATAATGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAATTAGGTGTACTCAGTTCTGCATTTTATGCAACAGTAATAATGC  400

seq1  AACAGACAATTGTAACACTGTGTTTTTCAAAATGTGCATGAAGAACAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGACAATTGTAACACTGTGTTTTTCAAAATGTGCATGAAGAACAGTT  450

seq1  AATGCTCTATTTTTCCAAATGTCTTTTGAGGATCAACCACTCAAGTTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTCTATTTTTCCAAATGTCTTTTGAGGATCAACCACTCAAGTTTTG  500

seq1  GAATCAGATAATCACTAACTGAAAAATATTTAAAAAATGGATTGTGAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCAGATAATCACTAACTGAAAAATATTTAAAAAATGGATTGTGAAGA  550

seq1  ATGAATAATCTGGAAATGACCACTCGAACATAAAATATAAGAAAGAGCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATAATCTGGAAATGACCACTCGAACATAAAATATAAGAAAGAGCAA  600

seq1  ATATTTATCCTGGAGAGAGAAAAAAAAGCAGCTAATTCCAAACATTAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTATCCTGGAGAGAGAAAAAAAAGCAGCTAATTCCAAACATTAAAT  650

seq1  TTGCCGTTAGATGAGATATGAGATAAAGGCTTTTGATTTAATACTCGTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCGTTAGATGAGATATGAGATAAAGGCTTTTGATTTAATACTCGTAA  700

seq1  GGAGACAGATTAACATAGTTGTTAAAAGAAGGGATTTATTAGAAGTTAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACAGATTAACATAGTTGTTAAAAGAAGGGATTTATTAGAAGTTAAA  750

seq1  ATATTTCTAAATGTATTTTTGTCAAACAGATCTGTGCCCTTGAGCAATGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTCTAAATGTATTTTTGTCAAACAGATCTGTGCCCTTGAGCAATGC  800

seq1  TTTAGTAAGTGTGAGCAAGCAGACCCACCAAAACTCGCTCATTTTATTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTAAGTGTGAGCAAGCAGACCCACCAAAACTCGCTCATTTTATTAT  850

seq1  ATCAAAAACCACATTTAGCTCTAAAATGTTTGTTCTACAAGGGGACTATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAAACCACATTTAGCTCTAAAATGTTTGTTCTACAAGGGGACTATG  900

seq1  GATAGAGAGATGATGGATGGATGGATA  927
      |||||||||||||||||||||||||||
seq2  GATAGAGAGATGATGGATGGATGGATA  927


seq1: chr12_95491195_95492114
seq2: B6Ng01-189C22.g_67_1000 (reverse)

seq1  ACAGTGAA-CCAACATCTAGAAGC-AGGTCAGA-GTAGCAG-GGCTAG-A  45
      |||||||| |||||||||  | || ||| |||| ||||||| |||||| |
seq2  ACAGTGAACCCAACATCTGAAGGCAAGGCCAGAGGTAGCAGAGGCTAGAA  50

seq1  GC-AATACTCAGGTGGC-TCCAATTAACCGCATCCGGCAGGAT-GTC-AG  91
      || |||||||||||||| ||||||||||||||||||||||||| ||| ||
seq2  GCAAATACTCAGGTGGCTTCCAATTAACCGCATCCGGCAGGATGGTCAAG  100

seq1  TCA--CGGCTGGAAAAACGTGTTTATGTTC-ACATTACATCCCC-TTTGT  137
      |||   |||||||||||||||||||||||| ||||||||||||| |||||
seq2  TCAACGGGCTGGAAAAACGTGTTTATGTTCAACATTACATCCCCTTTTGT  150

seq1  TAGGGAGCCAG-AAGATCTGTCTCAGCGAAGTCCCACCCACAGCAGCAGA  186
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TAGGGAGCCAGAAAGATCTGTCTCAGCGAAGTCCCACCCACAGCAGCAGA  200

seq1  CATGATAGTGTGCCCAGCCTTTCGTGTCCCTCTAGCATGAACCCACTGAA  236
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATAGTGTGCCCAGCCTTTCGTGTCCCTCTAGCATGAACCCACTGAA  250

seq1  CTCTGGTTGAACTTCACTGTGCAGCCAAATACATTTTAAATGCAATCTAC  286
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGTTGAACTTCACTGTGCAGCCAAATACATTTTAAATGCAATCTAC  300

seq1  TCCAGTTAAGTCTAATTTGTATTTCATTGCACAACCATGTCATTTCACAC  336
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTTAAGTCTAATTTGTATTTCATTGCACAACCATGTCATTTCACAC  350

seq1  AAACCAATCAAAACAGATTTGGGAGCAGCAGCTAATCTAAAACCTAAATG  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAATCAAAACAGATTTGGGAGCAGCAGCTAATCTAAAACCTAAATG  400

seq1  ATGCTCCTTCTACCCCCAAAGACGTAATTTCTCTTTCTGAAATCCACGCT  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCCTTCTACCCCCAAAGACGTAATTTCTCTTTCTGAAATCCACGCT  450

seq1  TAGGAGAAGGAACTGGAAAGCATTTCCATAAATAGACATCCTTGTTTTCA  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGAAGGAACTGGAAAGCATTTCCATAAATAGACATCCTTGTTTTCA  500

seq1  CAGCTAGCTCCTGAAATGTCTTCCCTCACTCAACAAGTATTTTTTTGCCC  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTAGCTCCTGAAATGTCTTCCCTCACTCAACAAGTATTTTTTTGCCC  550

seq1  TCCTTCATAGGAACTTCTAAATTCTTTTTTTTTTTCTAAATTCTTTCAAC  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCATAGGAACTTCTAAATTCTTTTTTTTTTTCTAAATTCTTTCAAC  600

seq1  ATCCCAGAACATAGTCCACCATCTGAAACTTCCAGAAGCAACTGTTTTAC  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAGAACATAGTCCACCATCTGAAACTTCCAGAAGCAACTGTTTTAC  650

seq1  TTAAGTGATTAACAGCCATGCATTTTGATGACTTGGTTATGACAGCATAT  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTGATTAACAGCCATGCATTTTGATGACTTGGTTATGACAGCATAT  700

seq1  ATGTTAGGATAACTTTCTTGTCAAATGGGAGGGCAACATGACAGATTTTT  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTAGGATAACTTTCTTGTCAAATGGGAGGGCAACATGACAGATTTTT  750

seq1  AAAAGATTCTTTGCATTCAAAAAAATAAAATAAAACAACAAGAAAAACAA  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATTCTTTGCATTCAAAAAAATAAAATAAAACAACAAGAAAAACAA  800

seq1  ACAACCCTCCAGAAAACAAACAAACAAAAAAAGCCTTTTAACTTGACATA  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCCTCCAGAAAACAAACAAACAAAAAAAGCCTTTTAACTTGACATA  850

seq1  TAATAACTCAGTAATAGAGAAGCTTAGCTGTACAATTATTTCTTGAAGTT  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAACTCAGTAATAGAGAAGCTTAGCTGTACAATTATTTCTTGAAGTT  900

seq1  CAGATAGTCACACATAAATTCTTACTCTGAATTC  920
      ||||||||||||||||||||||||||||||||||
seq2  CAGATAGTCACACATAAATTCTTACTCTGAATTC  934


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