BAC Information

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BAC

Clone NameB6Ng01-191B21
Chromosome12 (Build37)
Map Location 12,305,418 - 12,306,556
singlet/doubletsinglet
Overlap geneD12Ertd553e
Upstream geneSmc6, Vsnl1, EG209550, LOC217390, LOC628327, LOC627110, LOC100043209
Downstream geneLOC100043215, Mycn, EG668473, LOC628449, Ddx1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191B21.bB6Ng01-191B21.g
ACCGA014697GA014698
length1,1801,138
definitionB6Ng01-191B21.b B6Ng01-191B21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttgccagcgagatactagctcgggcgagagcctgacatccacca
agtagaaacaaaaagaactatacaaagaatcaacaaacccaggagctggt
tctttgagaagatcaataagatagataaaccagactaaccagagggcaca
gagacaatatccaaattttaaaaattagaaacaaaaatggagacatagta
acagaaactgaagaaactcaaaacattatcagatcctactacaaaagctt
atactcaacagaactggaaaatttacatgaaatggatgactttctaaaca
tataccaggtaccaaatctaaatcaagatcagataaaccatctaaacagt
tccataacctaagtaaacagaagcaatccattaaaaatctcccaaccaaa
aaatccccagaaccagaagattttagtgcagaattctaccagaccttcaa
aaaagacctaatgctaatacttctcacactatttcataaaatagaaatag
aaggaacactacccaatacattctatgaagccacagttacactgatacct
aaaccacacaaagacccaacaaagaaagagaactttacaccaattttcct
catgaatattgatgcaaaaatgctcaataaaattgttgcaaaccgaatcc
aagagcacattaaaatgatcattcaccatgatcaagcaggattcatccca
gggatacaaagatggttcaatataaggaaatccatcaacgtaatccacta
tataaagaaacttaaagaaaaaaaaaaaaacaacatgagcatctcattaa
atgctgaaaaagcctttgacaaaatacaacacccctttatgctaaaggta
tttgagtgatcacaaattcaaggtccatatctaaatataataaaagcaat
agacagcaagcccaatagccaacagcaaccctaatttgagaagaaacttg
atacatcccactaaaatcagtgacaagacagggctgcccacctcctcccc
ctgttctattcaatatagtactgagtagtgccagagttataggcacaatg
gagatcaaaggatacactgtaaagagaaggtcaaatatcacttatttgtg
atgattgataggttcatagtgacaaaaatctacagagacctctaagctga
taacatctcagcaaagtgggctgcatacca
gaattcttgcctctaatcacttcctaaaatgccttcccaaagcagctata
ttaaagggcaaaacactggaaaaaattaaataaaagcagatccctcagga
acagaggacacttcattcacaaggggaaagctctccaggcagggaatata
tcacggagtactcagagccagctggagaatttagtccctggtccctcttg
gctggcagcccactggggtcagccagcaccagtaaatgacattctggtct
tggtgtttacatagccccactcatgggagaaagaagtggttggaccctgg
aggcttgagatatatggagcatcagggtgggtggacaggatggtgatgcc
ttaggaagtcagttcttaagtcccagaggatggagcagctggggcaggca
gggcgggggcaactctgctcacagtccccaggctaatagcatacattctc
ccaaggattcctggatgtctggtttcatcctcacaaagaagagacaaagt
aggatgggagtcacctctcagcattacacaggtactgagagtaaagccca
aataccaccaaccttggaccaactaatagtaataaagataataaaggcag
ctgccactaattgtcctacatcagcaagtaagctagatgttgtacccaga
tcactattcaaactcttggaggtccatatgcatactcctacttcacagtt
gagagatctatataattttttttataaaggtcaaaagtagcaggctatga
ggactccgagccacagtccatgtgacattgcggcacagtatctcactttt
tagccacattactaacaagtgttcaaggggcttgcccatgtgataaccca
taaccaacttccgagatgttagagcaccctgcacaggacctcactgaaat
ctgtggtccaccctgcacaactatgctcagtgctatgaccacgtctgcat
atatgggtcccatggaactacatgtcttatgctctattcaatgaaacctt
gatgtttctggtacacaaagcaggcctcccctggtgatgtggtgagaaca
aacaggagaacccagactgacccagaccttattcaagacacattggtttc
ccaaatgcaactcacagtccatggactgccatctcatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_12305418_12306556
seq2: B6Ng01-191B21.g_65_1202 (reverse)

seq1  CATGAGAATGACCAGTCCCATGGGACTGTGAGTTGCATTTGGGGA--CCA  48
      |||||||  |  |||| |||| ||||||||||||||||||||| |  | |
seq2  CATGAGATGG--CAGT-CCAT-GGACTGTGAGTTGCATTTGGGAAACCAA  46

seq1  TGTGTCCTGA--TATGTCTGGGTCAGTCCTGGGTTCTCTTGTTTG-TCTC  95
      |||||| |||   | |||||||||||| |||||||||| |||||| ||||
seq2  TGTGTCTTGAATAAGGTCTGGGTCAGT-CTGGGTTCTCCTGTTTGTTCTC  95

seq1  AACCACATCACCA-GCGAGG-CTGCTTTGTGTTCCCAGAAACATCAAGGT  143
       |||||||||||| | |||| |||||||||| | ||||||||||||||||
seq2  -ACCACATCACCAGGGGAGGCCTGCTTTGTG-TACCAGAAACATCAAGGT  143

seq1  TTCATTG-ATAGAGCATAAGGACATGTAGTTCCATGGGACCCATATATGC  192
      ||||||| ||||||||||| ||||||||||||||||||||||||||||||
seq2  TTCATTGAATAGAGCATAA-GACATGTAGTTCCATGGGACCCATATATGC  192

seq1  AGACGTGGTCAATAGCACTGAGCATAGTTGTGCAGGGTGGACCACAGATT  242
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AGACGTGGTC-ATAGCACTGAGCATAGTTGTGCAGGGTGGACCACAGATT  241

seq1  TCAGTGAGGTCCTGTGCAGGGTGCTCTAACATCTCGGAAGTTGGTTATGG  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGAGGTCCTGTGCAGGGTGCTCTAACATCTCGGAAGTTGGTTATGG  291

seq1  GTTATCACATGGGCAAGCCCCTTGAACACTTGTTAGTAATGTGGCTAAAA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATCACATGGGCAAGCCCCTTGAACACTTGTTAGTAATGTGGCTAAAA  341

seq1  AGTGAGATACTGTGCCGCAATGTCACATGGACTGTGGCTCGGAGTCCTCA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGATACTGTGCCGCAATGTCACATGGACTGTGGCTCGGAGTCCTCA  391

seq1  TAGCCTGCTACTTTTGACCTTTATAAAAAAAATTATATAGATCTCTCAAC  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTGCTACTTTTGACCTTTATAAAAAAAATTATATAGATCTCTCAAC  441

seq1  TGTGAAGTAGGAGTATGCATATGGACCTCCAAGAGTTTGAATAGTGATCT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAGTAGGAGTATGCATATGGACCTCCAAGAGTTTGAATAGTGATCT  491

seq1  GGGTACAACATCTAGCTTACTTGCTGATGTAGGACAATTAGTGGCAGCTG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTACAACATCTAGCTTACTTGCTGATGTAGGACAATTAGTGGCAGCTG  541

seq1  CCTTTATTATCTTTATTACTATTAGTTGGTCCAAGGTTGGTGGTATTTGG  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTATTATCTTTATTACTATTAGTTGGTCCAAGGTTGGTGGTATTTGG  591

seq1  GCTTTACTCTCAGTACCTGTGTAATGCTGAGAGGTGACTCCCATCCTACT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTACTCTCAGTACCTGTGTAATGCTGAGAGGTGACTCCCATCCTACT  641

seq1  TTGTCTCTTCTTTGTGAGGATGAAACCAGACATCCAGGAATCCTTGGGAG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTCTTCTTTGTGAGGATGAAACCAGACATCCAGGAATCCTTGGGAG  691

seq1  AATGTATGCTATTAGCCTGGGGACTGTGAGCAGAGTTGCCCCCGCCCTGC  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTATGCTATTAGCCTGGGGACTGTGAGCAGAGTTGCCCCCGCCCTGC  741

seq1  CTGCCCCAGCTGCTCCATCCTCTGGGACTTAAGAACTGACTTCCTAAGGC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCCAGCTGCTCCATCCTCTGGGACTTAAGAACTGACTTCCTAAGGC  791

seq1  ATCACCATCCTGTCCACCCACCCTGATGCTCCATATATCTCAAGCCTCCA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCATCCTGTCCACCCACCCTGATGCTCCATATATCTCAAGCCTCCA  841

seq1  GGGTCCAACCACTTCTTTCTCCCATGAGTGGGGCTATGTAAACACCAAGA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCCAACCACTTCTTTCTCCCATGAGTGGGGCTATGTAAACACCAAGA  891

seq1  CCAGAATGTCATTTACTGGTGCTGGCTGACCCCAGTGGGCTGCCAGCCAA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAATGTCATTTACTGGTGCTGGCTGACCCCAGTGGGCTGCCAGCCAA  941

seq1  GAGGGACCAGGGACTAAATTCTCCAGCTGGCTCTGAGTACTCCGTGATAT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGACCAGGGACTAAATTCTCCAGCTGGCTCTGAGTACTCCGTGATAT  991

seq1  ATTCCCTGCCTGGAGAGCTTTCCCCTTGTGAATGAAGTGTCCTCTGTTCC  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCTGCCTGGAGAGCTTTCCCCTTGTGAATGAAGTGTCCTCTGTTCC  1041

seq1  TGAGGGATCTGCTTTTATTTAATTTTTTCCAGTGTTTTGCCCTTTAATAT  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGATCTGCTTTTATTTAATTTTTTCCAGTGTTTTGCCCTTTAATAT  1091

seq1  AGCTGCTTTGGGAAGGCATTTTAGGAAGTGATTAGAGGCAAGAATTC  1139
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCTTTGGGAAGGCATTTTAGGAAGTGATTAGAGGCAAGAATTC  1138