BAC Information

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BAC

Clone NameB6Ng01-193F18
Chromosome12 (Build37)
Map Location 85,661,491 - 85,815,502
singlet/doubletdoublet
Overlap geneZfp410, 9830169C18Rik, Coq6, Entpd5, 2900006K08Rik, Rnf113a2, Aldh6a1, Lin52
Upstream geneDpf3, Wdr21, Zfyve1, LOC626950, Rbm25, Psen1, Papln, Numb, LOC100042325, 2410016O06Rik, Acot2, Acot1, Acot4, Acot3, Acot5, LOC666963, Acot6, Dnalc1, Pnma1, C130039O16Rik, EG432676, Zadh1
Downstream geneChx10, Abcd4, 7420416P09Rik, Tmem90a, Npc2, Isca2, Ltbp2, 1110018G07Rik, Fcf1, Ylpm1, Prox2, Dlst, Rps6kl1, LOC100042021, Pgf, Eif2b2, Mlh3, Acyp1, 2810002I04Rik, Nek9, Tmed10, LOC100042549, LOC667119, Fos
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-193F18.bB6Ng01-193F18.g
ACCGA016352GA016353
length9851,044
definitionB6Ng01-193F18.b B6Ng01-193F18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,814,523 - 85,815,502)(85,661,491 - 85,662,511)
sequence
gaattcctgtctagaaaaacaacaacaacaacaacaaacctcaaaaaaca
ataaagatgcttctttatgtttttaaaagtgtatttattgtctacaatgt
ttgcatgtgtgtatgtgtgtgcatgtccacaactggtgccaggagaacat
cagatcctctggaattcaagttacaggtgagttgccatgtatgtgggtgc
tgggaacttggtcctccccaagaacagcaagtgctctcaacagcggaggc
atttctccagcccactttgggttattactgagacagctgtcttgcagtct
tccttccttctacagtgctggaatgacaagggtgtgtgccacaaaagaca
ccaaccaaatcatctcttgcccttgacctaacagttttacactcctttct
ctcccagacttgtacttctgcaagaacgtgccaaagttggaaaaaaaccc
tagcatttactttttaacctcagtctttactgtgaaagctgaccaattgt
ttttaattggcaaaatgactcttatttagaaacagtatattaaagaatta
aaaaattctcaggaaaacagggaatgaatcttttaaataacttccattat
ttttaaaatggtatctcaatttccctaatttttattagtattttccctaa
ataatataaagtcagttgtaatagaaattaactatatttgtatttccttc
ctgacagttacctatgttcctactctcaaaactaaaaataaaactgctga
ttttatgttttctttttttaaaaatatatttatttatttattgggcaagg
tgtggtatcacacttttaacctcagctcttgggacagagcatgaggttct
ctgtgagttcaaggccagctcatggtctgcataggagttccaggtcagtt
acggctacataaaggcccttgttcaaaattgtacgtacagccgggtgtgg
tggccgcacgccctttaatccctagccacttggga
gaattcatatgccaaagcctggggtggtggggagttacgcaggagttttg
gtttagggaaccagcaaggtctatgctcagcatggatagacagaccctta
ggttcagaatccagtggggaccaagaaagaaggaatggtgggaaggagga
agaatgcagatgaatccattgcgtgtgtaatcaaacagtcccacactcgc
ccctggcccccatttgttggctagttagtgctcagtactgacgactacac
ctgaacattgtgctgcgctatgcatgcgctttacctcaggttacacagtg
agactggatttctattcgtttttgttgttctgagatcactgtagcccaga
cagaccttgactttgctgtagagcccgggctccctgggctgagattgtag
gcgtgcactacccagctcctgctgggcttattttaaaataagcataatac
cttttagaatcaaggaaagtaagtcacactgtcctgttacacagtaaaac
tgctgtcatatctgggaatttctttttactttttcttaggatgttataat
tagtggtaaaatgggaaatagatttataatcacttttgttgtatggtctt
cataatattgtatatgtgtgtgtatttaaaagtcctaaaagataatcgta
tgttgcttccagttcgttgtcttatattttcaatgaacatctttgggaat
atagctttcccatatttaagaccctttcatagccaggtatatctgtaatc
ctgcccagtgctcaggaagaggtaggagaatcatttaacagctggaggcc
agcctgctcggtaatgtgaatttcaggcagtcaggccctccatttagaaa
ggagagaggtttgtgggaactggagataaggctcagtggttaaaggacac
tttgtgttggttgcagaagacccagaagttttgttccttaggcatccaca
ctagggctagcctagccatccacctggaaggaactcacttccatggagcc
tccaggagcattcccgatggccctcctgtttgaacctctagacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_85814523_85815502
seq2: B6Ng01-193F18.b_49_1033 (reverse)

seq1  TCCCAAGT-GCT-GGGATTAAA-GGCGTGC-GCCACCACACCCGGCTGTA  46
      |||||||| ||| ||||||||| ||||||| |||||||||||||||||||
seq2  TCCCAAGTGGCTAGGGATTAAAGGGCGTGCGGCCACCACACCCGGCTGTA  50

seq1  CGTACAATTTTGAAC-AGGGCCTTTATGTAGCCGTAACTGACCTGGAACT  95
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CGTACAATTTTGAACAAGGGCCTTTATGTAGCCGTAACTGACCTGGAACT  100

seq1  CCCTATGCAGACCATGAGCTGGCCTTGAACTCACAGAGAACCTCATGCTC  145
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -CCTATGCAGACCATGAGCTGGCCTTGAACTCACAGAGAACCTCATGCTC  149

seq1  TGTCCCAAGAGCTGAGGTTAAAAGTGTGATACCACACCTTGCCCAATAAA  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCAAGAGCTGAGGTTAAAAGTGTGATACCACACCTTGCCCAATAAA  199

seq1  TAAATAAATATATTTTT-AAAAAAGAAAACATAAAATCAGCAGTTTTATT  244
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TAAATAAATATATTTTTAAAAAAAGAAAACATAAAATCAGCAGTTTTATT  249

seq1  TTTAGTTTTGAGAGTAGGAACATAGGTAACTGTCAGGAAGGAAATACAAA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTTTTGAGAGTAGGAACATAGGTAACTGTCAGGAAGGAAATACAAA  299

seq1  TATAGTTAATTTCTATTACAACTGACTTTATATTATTTAGGGAAAATACT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTTAATTTCTATTACAACTGACTTTATATTATTTAGGGAAAATACT  349

seq1  AATAAAAATTAGGGAAATTGAGATACCATTTTAAAAATAATGGAAGTTAT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAAATTAGGGAAATTGAGATACCATTTTAAAAATAATGGAAGTTAT  399

seq1  TTAAAAGATTCATTCCCTGTTTTCCTGAGAATTTTTTAATTCTTTAATAT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAGATTCATTCCCTGTTTTCCTGAGAATTTTTTAATTCTTTAATAT  449

seq1  ACTGTTTCTAAATAAGAGTCATTTTGCCAATTAAAAACAATTGGTCAGCT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTTCTAAATAAGAGTCATTTTGCCAATTAAAAACAATTGGTCAGCT  499

seq1  TTCACAGTAAAGACTGAGGTTAAAAAGTAAATGCTAGGGTTTTTTTCCAA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAGTAAAGACTGAGGTTAAAAAGTAAATGCTAGGGTTTTTTTCCAA  549

seq1  CTTTGGCACGTTCTTGCAGAAGTACAAGTCTGGGAGAGAAAGGAGTGTAA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGCACGTTCTTGCAGAAGTACAAGTCTGGGAGAGAAAGGAGTGTAA  599

seq1  AACTGTTAGGTCAAGGGCAAGAGATGATTTGGTTGGTGTCTTTTGTGGCA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTTAGGTCAAGGGCAAGAGATGATTTGGTTGGTGTCTTTTGTGGCA  649

seq1  CACACCCTTGTCATTCCAGCACTGTAGAAGGAAGGAAGACTGCAAGACAG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCCTTGTCATTCCAGCACTGTAGAAGGAAGGAAGACTGCAAGACAG  699

seq1  CTGTCTCAGTAATAACCCAAAGTGGGCTGGAGAAATGCCTCCGCTGTTGA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCAGTAATAACCCAAAGTGGGCTGGAGAAATGCCTCCGCTGTTGA  749

seq1  GAGCACTTGCTGTTCTTGGGGAGGACCAAGTTCCCAGCACCCACATACAT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACTTGCTGTTCTTGGGGAGGACCAAGTTCCCAGCACCCACATACAT  799

seq1  GGCAACTCACCTGTAACTTGAATTCCAGAGGATCTGATGTTCTCCTGGCA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAACTCACCTGTAACTTGAATTCCAGAGGATCTGATGTTCTCCTGGCA  849

seq1  CCAGTTGTGGACATGCACACACATACACACATGCAAACATTGTAGACAAT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTGTGGACATGCACACACATACACACATGCAAACATTGTAGACAAT  899

seq1  AAATACACTTTTAAAAACATAAAGAAGCATCTTTATTGTTTTTTGAGGTT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACACTTTTAAAAACATAAAGAAGCATCTTTATTGTTTTTTGAGGTT  949

seq1  TGTTGTTGTTGTTGTTGTTTTTCTAGACAGGAATTC  980
      ||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTGTTGTTGTTGTTTTTCTAGACAGGAATTC  985

seq1: chr12_85661491_85662511
seq2: B6Ng01-193F18.g_67_1110

seq1  GAATTCATATGCCAAAGCCTGGGGTGGTGGGGAGTTACGCAGGAGTTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATGCCAAAGCCTGGGGTGGTGGGGAGTTACGCAGGAGTTTTG  50

seq1  GTTTAGGGAACCAGCAAGGTCTATGCTCAGCATGGATAGACAGACCCTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAGGGAACCAGCAAGGTCTATGCTCAGCATGGATAGACAGACCCTTA  100

seq1  GGTTCAGAATCCAGTGGGGACCAAGAAAGAAGGAATGGTGGGAAGGAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCAGAATCCAGTGGGGACCAAGAAAGAAGGAATGGTGGGAAGGAGGA  150

seq1  AGAATGCAGATGAATCCATTGCGTGTGTAATCAAACAGTCCCACACTCGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGCAGATGAATCCATTGCGTGTGTAATCAAACAGTCCCACACTCGC  200

seq1  CCCTGGCCCCCATTTGTTGGCTAGTTAGTGCTCAGTACTGACGACTACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGCCCCCATTTGTTGGCTAGTTAGTGCTCAGTACTGACGACTACAC  250

seq1  CTGAACATTGTGCTGCGCTATGCATGCGCTTTACCTCAGGTTACACAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACATTGTGCTGCGCTATGCATGCGCTTTACCTCAGGTTACACAGTG  300

seq1  AGACTGGATTTCTATTCGTTTTTGTTGTTCTGAGATCACTGTAGCCCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGGATTTCTATTCGTTTTTGTTGTTCTGAGATCACTGTAGCCCAGA  350

seq1  CAGACCTTGACTTTGCTGTAGAGCCCGGGCTCCCTGGGCTGAGATTGTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACCTTGACTTTGCTGTAGAGCCCGGGCTCCCTGGGCTGAGATTGTAG  400

seq1  GCGTGCACTACCCAGCTCCTGCTGGGCTTATTTTAAAATAAGCATAATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTGCACTACCCAGCTCCTGCTGGGCTTATTTTAAAATAAGCATAATAC  450

seq1  CTTTTAGAATCAAGGAAAGTAAGTCACACTGTCCTGTTACACAGTAAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAGAATCAAGGAAAGTAAGTCACACTGTCCTGTTACACAGTAAAAC  500

seq1  TGCTGTCATATCTGGGAATTTCTTTTTACTTTTTCTTAGGATGTTATAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTCATATCTGGGAATTTCTTTTTACTTTTTCTTAGGATGTTATAAT  550

seq1  TAGTGGTAAAATGGGAAATAGATTTATAATCACTTTTGTTGTATGGTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGTAAAATGGGAAATAGATTTATAATCACTTTTGTTGTATGGTCTT  600

seq1  CATAATATTGTATATGTGTGTGTATTTAAAAGTCCTAAAAGATAATCGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATATTGTATATGTGTGTGTATTTAAAAGTCCTAAAAGATAATCGTA  650

seq1  TGTTGCTTCCAGTTCGTTGTCTTATATTTTCAATGAACATCTTTGGGAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCTTCCAGTTCGTTGTCTTATATTTTCAATGAACATCTTTGGGAAT  700

seq1  ATAGCTTTCCCATATTTAAGACCCTTTCATAGCCAGGTATATCTGTAATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTTTCCCATATTTAAGACCCTTTCATAGCCAGGTATATCTGTAATC  750

seq1  CTGCCCAGTGCTCAGGAAGAGGTAGGAGAATCA-TTAACAGCTGGAGGCC  799
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CTGCCCAGTGCTCAGGAAGAGGTAGGAGAATCATTTAACAGCTGGAGGCC  800

seq1  AGCCTGCTCGGTAATGTGAATTTCAGGCAGTCAGG-CCTCCA-TTAG-AA  846
      ||||||||||||||||||||||||||||||||||| |||||| |||| ||
seq2  AGCCTGCTCGGTAATGTGAATTTCAGGCAGTCAGGCCCTCCATTTAGAAA  850

seq1  GGAGAGAGGTTTGTGGGAACTGGAGATAAGGCTCAGTGGTT-AAGGACAC  895
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GGAGAGAGGTTTGTGGGAACTGGAGATAAGGCTCAGTGGTTAAAGGACAC  900

seq1  -TTGTGTT-GTTGCAG-AGAACCAGA--GTTTGGTCCTTA-GCATCCACA  939
       ||||||| ||||||| ||| |||||   |||| |||||| |||||||||
seq2  TTTGTGTTGGTTGCAGAAGACCCAGAAGTTTTGTTCCTTAGGCATCCACA  950

seq1  C-AGGGC-AGCCTAGC--ACCACCTGGAAGGAACTCAC-TCCATGGAG-C  983
      | ||||| ||||||||   ||||||||||||||||||| ||||||||| |
seq2  CTAGGGCTAGCCTAGCCATCCACCTGGAAGGAACTCACTTCCATGGAGCC  1000

seq1  TCCAGGAGCAT--CCGAT-GCCCT-CTGTTGGA--CTCTAGACG  1021
      |||||||||||  ||||| ||||| ||||| ||  |||||||||
seq2  TCCAGGAGCATTCCCGATGGCCCTCCTGTTTGAACCTCTAGACG  1044