BAC Information

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BAC

Clone NameB6Ng01-195A18
Chromosome12 (Build37)
Map Location 27,531,718 - 27,532,914
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668726, Rnf144, Rsad2, Tyki, LOC668731, 1700020D12Rik
Downstream geneSox11, LOC100043009
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-195A18.bB6Ng01-195A18.g
ACCGA017576GA017577
length1,191408
definitionB6Ng01-195A18.b B6Ng01-195A18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctttcgacagcactcaatgtaatatacagctgtttgtaaattaa
tgacctagagaccccataatgtaaatatccctgtttcttaaaacagacaa
aattatgttatatagtattataatttataatatattatataagtatacta
atatattaataatatatagcatattcatataattttaatttatataataa
tatataaatgatatattacacttatttatttataagtataaagtattata
atttaaagtactacattatagctatttttgtttattaaagggaaaagtac
agatgttaaatataatattctgtacacaagttattagcaatgtcacttta
atcagaaattttcactctctacattgtttaccacctatagtagataaatt
tggagttctatggcccctgtcaaagacatggatgtatacagtaggctatg
tgctgggcacagtgaaagcaggcaaagccatcaccagttcatttcttagg
gacgcattcactctcaacatggcttcacttcagaatcccagaaagatctt
cacatacagcttcaagagtcacatctcagacatcccagctgaaattttga
cagtaaaacaagatattggaatgtcttacaactcttgacttgactctgtc
atatatggacagaactgaaaaatactataaattcattgtgggaatgaatt
tcctgccagactaaactaaaatttacttaacaaccaagttacaggttatt
caccaccatttctcctttcatcacatgtaatacattgggaaagtaagata
agtgttagacaaattaatattttaaactcagcactccaactgtttttaag
ccctacaatgttttggtattaatacagcttaagtccagaaaactactctg
ctttgaaaggatgttcaattctcagatgctgcaagaactcagtttgaaac
aatcaagtatggtgaggaaattttgaaagtgaatttatcatgcacatcca
aagagaccaaccagtatgtgagacatctcatgagctcagcccgaggagag
ttctgtcttatctgcattgcattttcgttttctgggatagaaaatataat
ctgtaattcatgtacctgttatcaatcacacatatgcctacaaatctatg
catccttcgagagttatttcatataaggaaccttttgtaac

ttctcttgatgaagcgtccgtttccatttatttttattacttttgattga
aagtctattttatcagttggtagaaaggctctaccagcttgtttcttcag
cccatttgcttggaaagccttttttcctgtcttctaccctgaggtaatgc
ctatctttgttgctgaagtgtgttacttgtttgtggatgaacaatagatc
cagttcaaacatccattctgttagcctgtgtctttttattggggaattag
tcaatttatattgagagatattaatgaacaatgattgttaatttcttata
gtttggtggtgatggtagtggtgtgtgtgtgtgtgtgtcctcatttggtt
atgttcgtgctattattttttttttgtggtttcttggatgtagttacctt
tcttttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_27531718_27532914
seq2: B6Ng01-195A18.b_45_1235 (reverse)

seq1  GTTACAAA---GTCTATATATGGAATAACATCTCGAGGAATGCATAGATT  47
      ||||||||    ||  |||||| |||||| |||||| | ||||||||| |
seq2  GTTACAAAAGGTTCCTTATATGAAATAAC-TCTCGAAGGATGCATAGA-T  48

seq1  TTGTA-GCATATGTGTTGATTTAATAAACAGTACATGAAATTACAAGATT  96
      ||||| ||||||||| ||| || ||||   ||||||| |||||| |||||
seq2  TTGTAGGCATATGTG-TGA-TTGATAACAGGTACATG-AATTAC-AGATT  94

seq1  AATATTTTCTATCCCAG-AAACGAAAATGCCAATGCAGAATAAGACAGAA  145
       |||||||||||||||| ||||||||||| |||||||| |||||||||||
seq2  -ATATTTTCTATCCCAGAAAACGAAAATG-CAATGCAG-ATAAGACAGAA  141

seq1  CTCTTCCTCGGGCTGAGCTCATGAGATTGTCTCACATACTGGTTGGTCTC  195
      ||| |||||||||||||||||||||| |||||||||||||||||||||||
seq2  CTC-TCCTCGGGCTGAGCTCATGAGA-TGTCTCACATACTGGTTGGTCTC  189

seq1  TTTGGATGTGCATGATAAATTCACTTTCAAAATTTCCTCACCATACTTGA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGATGTGCATGATAAATTCACTTTCAAAATTTCCTCACCATACTTGA  239

seq1  TTGTTTCAAACTGAGTTCTTGCAGCATCTGAGAATTGAACATCC-TTCAA  294
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TTGTTTCAAACTGAGTTCTTGCAGCATCTGAGAATTGAACATCCTTTCAA  289

seq1  AGCAGAGTAGTTTTCTGGACTTTAAGCTGTATTAATACCAAAACATTGTA  344
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AGCAGAGTAGTTTTCTGGAC-TTAAGCTGTATTAATACCAAAACATTGTA  338

seq1  GGGCTTAAAAACAGTTGGAGTGCTGAGTTTAAAATATTAATTTGTCTAAC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTAAAAACAGTTGGAGTGCTGAGTTTAAAATATTAATTTGTCTAAC  388

seq1  ACTTATCTTACTTTCCCAATGTATTACATGTGATGAAAGGAGAAATGGTG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATCTTACTTTCCCAATGTATTACATGTGATGAAAGGAGAAATGGTG  438

seq1  GTGAATAACCTGTAACTTGGTTGTTAAGTAAATTTTAGTTTAGTCTGGCA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATAACCTGTAACTTGGTTGTTAAGTAAATTTTAGTTTAGTCTGGCA  488

seq1  GGAAATTCATTCCCACAATGAATTTATAGTATTTTTCAGTTCTGTCCATA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATTCATTCCCACAATGAATTTATAGTATTTTTCAGTTCTGTCCATA  538

seq1  TATGACAGAGTCAAGTCAAGAGTTGTAAGACATTCCAATATCTTGTTTTA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACAGAGTCAAGTCAAGAGTTGTAAGACATTCCAATATCTTGTTTTA  588

seq1  CTGTCAAAATTTCAGCTGGGATGTCTGAGATGTGACTCTTGAAGCTGTAT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAAAATTTCAGCTGGGATGTCTGAGATGTGACTCTTGAAGCTGTAT  638

seq1  GTGAAGATCTTTCTGGGATTCTGAAGTGAAGCCATGTTGAGAGTGAATGC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGATCTTTCTGGGATTCTGAAGTGAAGCCATGTTGAGAGTGAATGC  688

seq1  GTCCCTAAGAAATGAACTGGTGATGGCTTTGCCTGCTTTCACTGTGCCCA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTAAGAAATGAACTGGTGATGGCTTTGCCTGCTTTCACTGTGCCCA  738

seq1  GCACATAGCCTACTGTATACATCCATGTCTTTGACAGGGGCCATAGAACT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATAGCCTACTGTATACATCCATGTCTTTGACAGGGGCCATAGAACT  788

seq1  CCAAATTTATCTACTATAGGTGGTAAACAATGTAGAGAGTGAAAATTTCT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATTTATCTACTATAGGTGGTAAACAATGTAGAGAGTGAAAATTTCT  838

seq1  GATTAAAGTGACATTGCTAATAACTTGTGTACAGAATATTATATTTAACA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAAGTGACATTGCTAATAACTTGTGTACAGAATATTATATTTAACA  888

seq1  TCTGTACTTTTCCCTTTAATAAACAAAAATAGCTATAATGTAGTACTTTA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTACTTTTCCCTTTAATAAACAAAAATAGCTATAATGTAGTACTTTA  938

seq1  AATTATAATACTTTATACTTATAAATAAATAAGTGTAATATATCATTTAT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATAATACTTTATACTTATAAATAAATAAGTGTAATATATCATTTAT  988

seq1  ATATTATTATATAAATTAAAATTATATGAATATGCTATATATTATTAATA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTATTATATAAATTAAAATTATATGAATATGCTATATATTATTAATA  1038

seq1  TATTAGTATACTTATATAATATATTATAAATTATAATACTATATAACATA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGTATACTTATATAATATATTATAAATTATAATACTATATAACATA  1088

seq1  ATTTTGTCTGTTTTAAGAAACAGGGATATTTACATTATGGGGTCTCTAGG  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTCTGTTTTAAGAAACAGGGATATTTACATTATGGGGTCTCTAGG  1138

seq1  TCATTAATTTACAAACAGCTGTATATTACATTGAGTGCTGTCGAAAGGAA  1194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAATTTACAAACAGCTGTATATTACATTGAGTGCTGTCGAAAGGAA  1188

seq1  TTC  1197
      |||
seq2  TTC  1191


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