BAC Information

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BAC

Clone NameB6Ng01-195B09
Chromosome12 (Build37)
Map Location 114,453,862 - 114,454,776
singlet/doubletsinglet
Overlap genenone
Upstream geneA730018C14Rik, A530016L24Rik, Tmem179, 2610204M08Rik, Adssl1, Siva1, Akt1, EG382639, AW555464, LOC382640, Pld4, AI450948, LOC100041194, BC022687, Cdca4, Gpr132, Jag2, Nudt14, Brf1, Btbd6, Pacs2, Tex22, Mta1, Crip2, Crip1, 4930427A07Rik, LOC676349, Tmem121
Downstream geneIgh, Igh-2, Gm900, Igh-1b, Igh-3, Ighg1, AI324046, LOC668370, LOC668375, EG382645, Igh-5, Igh-6, Ighj4, Ighj3, Ighj2, Ighj1, Ighd4-1, Ighd3-2, Ighd5-6, Ighd2-8, Ighd5-5, Ighd2-7, Ighd5-8, Ighd5-4, Ighd2-6, Ighd5-7, Ighd5-3, Ighd2-5, Ighd5-2, Ighd2-4, Ighd6-2, Ighd2-3, Ighd6-1, Ighd1-1, 4930523C11Rik, Ighd3-1, Ighd5-1, Adam6, Ighv5-1, Ighv2-1, Ighv5-2, Ighv2-2, Ighv5-3, Ighv5-4, Ighv6-1, Ighv2-3, Ighv5-5, Ighv5-6, Ankrd12-like, Ighv5-7, EG668389, Ighv5-8, Ighv5-9, Ighv5-10, Ighv2-5, Ighv5-11, Ighv5-12, Ighv2-6, Ighv5-9-1, EG628098, Ighv2-9-1, Ighv5-13, Ighv2-6-8, EG629785, Ighv2-7, LOC668405, Ighv5-15, Ighv5-16, Ighv5-17, Ighv5-18, Ighv2-8, Ighv2-9, Ighv5-19, Ighv7-1, Ighv7-2, Ighv14-1, Ighv4-1, Ighv3-1, Ighv11-1, Ighv14-2, Ighv4-2, Ighv3-2, Ighv11-2, Ighv14-3, EG629812, Ighv6-2, Ighv9-1, Ighv12-1, EG629818, Ighv12-2, Ighv9-3, Ighv7-3, Ighv15-1, Ighv14-4, EG668438
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-195B09.bB6Ng01-195B09.g
ACCGA017601GA017602
length918931
definitionB6Ng01-195B09.b B6Ng01-195B09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtttcattgctgagaatggatgtggaaaggattttatttgcca
tttacaatcaagatcaagaggaatggcttagtggcttagcagcattgaga
gatgccctctgcactgtctggactctggctgtaggagagaggccttctgg
gaatcagccagtgttatagtatctcagggacaggggcaaggggagagact
aggggaggggcagagtgtcatagagatctctgtggtcacagggatatagg
ctatgtgctttcttcccaatactagggatgagtgtcaggagctcgcacag
atgagtcctaggaatagcagctatgtctctgatgggagacagaagtcaag
taagagttgggtgatgaatcactcaggggacagcagggaggtgtgttcca
ctgaatgggcagatgaacttgggtctggctgggtgggactggcggagaat
gcagtgatgtggagaggccaccagggggtgcacaagcactataatttggc
cgacgaaggcagagcagctgctgcagagcctgaggcagacctgcctgcca
gtgttgactggacactgccatgacactgatgaccctaaagttgagcaaac
cttggccgtcccagggctgggctgatattttaaccaaatcctgacgctca
tctaagctggtggtgtggagttgcttgctccctttcaggggcacaacgaa
gacattttaggcagaggagcttacaggaattttcatccagagaccccatt
aggaatagtctaaggacattgtcctagacagaggcccagcagcctgctgt
aagagttgcaagaagccaactgaccagcctcttgtttgcagaaaggacat
gcaggcgaacataatacacaggactcataacccataacccagagaccacc
ctcgttggttagggggag
gaattctgtctttgactctgaggtgtatttactatatgcagcaaaatgct
gggtcctgtttatatgtccagtctgctagcctatatctttttattgggga
ataaagtccattgatattgagagatattagggaccaatgatcattgcttc
ctgttatttttgttgtaagagttggaattacatttgtgtgtttctcttct
ttttggtttgttgtgaaaaaattaatttcttgctttttcttaagggtagt
ttccctccttgtgttgtacttttccttctattatccccatagggttggat
tagtagaaagatattgtttaaatttggttttgtcttgaaaaactttgatt
tctccgtctatggtaattatgagttttgctaggtaaaaccatctgggcta
gcatttttgatgtcttagggtctgaatgacatctgccctggatcttcttg
cttttatagtctctggtgagaagtctggtgcaattctgacaggtctgcct
ttatatgttagttgacttttttcccttactgctttcaatattcttgcttt
gttttgtgcgtttggtgttttagttatttatatgacgagagaaatttctt
ttctggtcccatctgtttggtgttctgtaggcttcttgtatgtttatggg
catttctttctctaggttaggaaagtttacttctacaattatgttgaaga
tgtttgctggccctttgagttgggaactagttgagaaacttttaatggct
gcttctatttccttagggattataggactgtttagatcattacctgatct
ttgtttagctttggtaagtagtatctgtcttagaaatccattgcatttta
gactttttccaattgtgtcaggtacagtctattaaagtgagatcctaatg
attcttttgcattctttacagtgttctgttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_114453862_114454776
seq2: B6Ng01-195B09.b_44_961

seq1  GAATTCAGTTTCATTGCTGAGAATGGATGTGGAAAGGATTTTATTTGCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTTCATTGCTGAGAATGGATGTGGAAAGGATTTTATTTGCCA  50

seq1  TTTACAATCAAGATCAAGAGGAATGGCTTAGTGGCTTAGCAGCATTGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAATCAAGATCAAGAGGAATGGCTTAGTGGCTTAGCAGCATTGAGA  100

seq1  GATGCCCTCTGCACTGTCTGGACTCTGGCTGTAGGAGAGAGGCCTTCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCCCTCTGCACTGTCTGGACTCTGGCTGTAGGAGAGAGGCCTTCTGG  150

seq1  GAATCAGCCAGTGTTATAGTATCTCAGGGACAGGGGCAAGGGGAGAGACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCAGCCAGTGTTATAGTATCTCAGGGACAGGGGCAAGGGGAGAGACT  200

seq1  AGGGGAGGGGCAGAGTGTCATAGAGATCTCTGTGGTCACAGGGATATAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAGGGGCAGAGTGTCATAGAGATCTCTGTGGTCACAGGGATATAGG  250

seq1  CTATGTGCTTTCTTCCCAATACTAGGGATGAGTGTCAGGAGCTCGCACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTGCTTTCTTCCCAATACTAGGGATGAGTGTCAGGAGCTCGCACAG  300

seq1  ATGAGTCCTAGGAATAGCAGCTATGTCTCTGATGGGAGACAGAAGTCAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTCCTAGGAATAGCAGCTATGTCTCTGATGGGAGACAGAAGTCAAG  350

seq1  TAAGAGTTGGGTGATGAATCACTCAGGGGACAGCAGGGAGGTGTGTTCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGTTGGGTGATGAATCACTCAGGGGACAGCAGGGAGGTGTGTTCCA  400

seq1  CTGAATGGGCAGATGAACTTGGGTCTGGCTGGGTGGGACTGGCGGAGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATGGGCAGATGAACTTGGGTCTGGCTGGGTGGGACTGGCGGAGAAT  450

seq1  GCAGTGATGTGGAGAGGCCACCAGGGGGTGCACAAGCACTATAATTTGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGATGTGGAGAGGCCACCAGGGGGTGCACAAGCACTATAATTTGGC  500

seq1  CGACGAAGGCAGAGCAGCTGCTGCAGAGCCTGAGGCAGACCTGCCTGCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACGAAGGCAGAGCAGCTGCTGCAGAGCCTGAGGCAGACCTGCCTGCCA  550

seq1  GTGTTGACTGGACACTGCCATGACACTGATGACCCTAAAGTTGAGCAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGACTGGACACTGCCATGACACTGATGACCCTAAAGTTGAGCAAAC  600

seq1  CTTGGCCGTCCCAGGGCTGGGCTGATATTTTAACCAAATCCTGACGCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCCGTCCCAGGGCTGGGCTGATATTTTAACCAAATCCTGACGCTCA  650

seq1  TCTAAGCTGGTGGTGTGGAGTTGCTTGCTCCCTTTCAGGGGCACAACGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGCTGGTGGTGTGGAGTTGCTTGCTCCCTTTCAGGGGCACAACGAA  700

seq1  GACATTTTAGGCAGAGGAGCTTACAGGAATTTTCATCCAGAGACCCCATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTTTAGGCAGAGGAGCTTACAGGAATTTTCATCCAGAGACCCCATT  750

seq1  AGGAATAGTCTAAGGACATTGTCCTAGACAGAGGCCCAGCAGCCTGCTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATAGTCTAAGGACATTGTCCTAGACAGAGGCCCAGCAGCCTGCTGT  800

seq1  AAGAGTTGCAAGAAGCCAACTGACCAGCCTCTTG-TTGCAGAAAGGACAT  849
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AAGAGTTGCAAGAAGCCAACTGACCAGCCTCTTGTTTGCAGAAAGGACAT  850

seq1  GCAGGCGAACATAATACACAGGACTCATAA-CCATAACCCAGAGACCACC  898
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GCAGGCGAACATAATACACAGGACTCATAACCCATAACCCAGAGACCACC  900

seq1  CTCG-TGGTTAGGGGGAG  915
      |||| |||||||||||||
seq2  CTCGTTGGTTAGGGGGAG  918