BAC Information

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BAC

Clone NameB6Ng01-195D03
Chromosome12 (Build37)
Map Location 19,338,978 - 19,534,355
singlet/doubletdoublet
Overlap geneEG668584, EG544848, EG627871, LOC100042698
Upstream geneEG632781, LOC668541, LOC673160, 5730507C01Rik, EG668553, LOC668558, LOC100042641, LOC668568, LOC668570, EG668413, LOC671401, EG546524
Downstream geneLOC629055, EG668588, LOC100042706, EG668594, EG668600, LOC100042727, LOC673301, EG668605, LOC668614, LOC100042751, LOC100043371, EG668455, LOC100042755
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-195D03.bB6Ng01-195D03.g
ACCGA017682GA017683
length837768
definitionB6Ng01-195D03.b B6Ng01-195D03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(19,533,769 - 19,534,355)(19,338,978 - 19,339,744)
sequence
gaattccaattaaagatatgtgccaccatgcctgaccagagggtattttc
ttttcttccttccttcctttctttctttctttctttctttctttctttct
ttctttctttctttctttctttctttctttctttcttgttttgttttttt
gagacagggtttctctgtataaccctggatgtcctggaactcacttttta
gaccaggctgtcctcgaactcaaatccgcctgcctctacctcccaagtgc
tgggattaaaggcatgtgggccttgcccagagagggtattttcttaacta
gtgattgtgaagcagagcccagcccattgtaggtggtacaaccctgggct
agtattctgagttctaaaagaaagaaggttgagcaagccatggggaacaa
gtcagtaattaccaaccctttcatggtctctgtatcagctcctgccttca
ggttcctgccctgtttgagtcctgccctcactgcttttgatgatgaactg
ttatgtggaaactctgagtgaataaaccctttcctcctcaagttgcttgt
ggccatggtgtgtcatcagagcaatggaaaccttaactcagacaacacgg
atgaagcctacagctcagagggtctactgacatgcccatggttatagagc
cctaggaagggtgcaggatgcaggctaggtgtacctgaccctgaattcta
gtctccctccctcaatcagagctgaatcaagtgggctggaaaaggggcag
tcctgcatagggaagagagtgtatcccaaacacctctgtgcccatcaata
gttttcacagggtcatctactccccctctccccacct
gaattcttttttttaattatttaaatttttattttaatttagatttagta
tttattttctacatgagtgtttaactgaatgtatgtttgtgtaatatgtt
agaggccagaaaagtgcactgggtcgccctggaactggagttacaaatga
ttgggaaccgccctatggatgctgggaactttatccaggaccctctgaaa
aagcagcaactgctcttaactgctgagccatctcaccagccataaaggag
agtctttttttgcttgttggtttgttttttagagacaaggattctccgtg
tagccctggctgtcctagaacttgctgtttagagcatgttggcttcaaac
tcagagatccaccagtctgcctcctgagtactgggattaaagatgtgtgc
caccactgctcagctcagaagaatcttaatgaagaattatcaaactcagt
ggttctcaacctatgggttccaacccctttgggggatcaaatgaactttt
cacagaggtggcataagaccaacagaaaacacagatattcatattcagat
tcataacaatagtgtaattaccgttatgaagtagcagtgaaaataatctt
atggttgagggtcactacaacacaaggaactgcattaaagggtcacagca
ttaggaaggctgagaaccatccatctagatcatggcagcctatgagcatg
cctgttggggggttgtgttgatggttaattgatgtgggaaaccccattac
tactgtctagacaggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_19533769_19534355
seq2: B6Ng01-195D03.b_288_878 (reverse)

seq1  GGTGGGGAGA-GGGGAGTAGATGACCCTGTG-AAACTATTGAT-GGCACA  47
      |||||||||| |||||||||||||||||||| ||||||||||| ||||||
seq2  GGTGGGGAGAGGGGGAGTAGATGACCCTGTGAAAACTATTGATGGGCACA  50

seq1  GAGGTGTTTGGGATACACTCTCTTCCCTATGCAGGACTG-CCCTTTTCCA  96
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GAGGTGTTTGGGATACACTCTCTTCCCTATGCAGGACTGCCCCTTTTCCA  100

seq1  GCCCACTTGATTCAGCTCTGATTGAGGGAGGGAGACTAGAATTCAGGGTC  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCACTTGATTCAGCTCTGATTGAGGGAGGGAGACTAGAATTCAGGGTC  150

seq1  AGGTACACCTAGCCTGCATCCTGCACCCTTCCTAGGGCTCTATAACCATG  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACACCTAGCCTGCATCCTGCACCCTTCCTAGGGCTCTATAACCATG  200

seq1  GGCATGTCAGTAGACCCTCTGAGCTGTAGGCTTCATCCGTGTTGTCTGAG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGTCAGTAGACCCTCTGAGCTGTAGGCTTCATCCGTGTTGTCTGAG  250

seq1  TTAAGGTTTCCATTGCTCTGATGACACACCATGGCCACAAGCAACTTGAG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGTTTCCATTGCTCTGATGACACACCATGGCCACAAGCAACTTGAG  300

seq1  GAGGAAAGGGTTTATTCACTCAGAGTTTCCACATAACAGTTCATCATCAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAAGGGTTTATTCACTCAGAGTTTCCACATAACAGTTCATCATCAA  350

seq1  AAGCAGTGAGGGCAGGACTCAAACAGGGCAGGAACCTGAAGGCAGGAGCT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGTGAGGGCAGGACTCAAACAGGGCAGGAACCTGAAGGCAGGAGCT  400

seq1  GATACAGAGACCATGAAAGGGTTGGTAATTACTGACTTGTTCCCCATGGC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACAGAGACCATGAAAGGGTTGGTAATTACTGACTTGTTCCCCATGGC  450

seq1  TTGCTCAACCTTCTTTCTTTTAGAACTCAGAATACTAGCCCAGGGTTGTA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCAACCTTCTTTCTTTTAGAACTCAGAATACTAGCCCAGGGTTGTA  500

seq1  CCACCTACAATGGGCTGGGCTCTGCTTCACAATCACTAGTTAAGAAAATA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTACAATGGGCTGGGCTCTGCTTCACAATCACTAGTTAAGAAAATA  550

seq1  CCCTCTCTGGGCAAGGCCCACATGCCTTTAATCCCAGCACT  587
      |||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTCTGGGCAAGGCCCACATGCCTTTAATCCCAGCACT  591

seq1: chr12_19338978_19339744
seq2: B6Ng01-195D03.g_67_834

seq1  GAATTCTTTTTTTTAATTATTTAAATTTTTATTTTAATTTAGATTTAGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTTTTAATTATTTAAATTTTTATTTTAATTTAGATTTAGTA  50

seq1  TTTATTTTCTACATGAGTGTTTAACTGAATGTATGTTTGTGTAATATGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTCTACATGAGTGTTTAACTGAATGTATGTTTGTGTAATATGTT  100

seq1  AGAGGCCAGAAAAGTGCACTGGGTCGCCCTGGAACTGGAGTTACAAATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCCAGAAAAGTGCACTGGGTCGCCCTGGAACTGGAGTTACAAATGA  150

seq1  TTGGGAACCGCCCTATGGATGCTGGGAACTTTATCCAGGACCCTCTGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAACCGCCCTATGGATGCTGGGAACTTTATCCAGGACCCTCTGAAA  200

seq1  AAGCAGCAACTGCTCTTAACTGCTGAGCCATCTCACCAGCCATAAAGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGCAACTGCTCTTAACTGCTGAGCCATCTCACCAGCCATAAAGGAG  250

seq1  AGTCTTTTTTTGCTTGTTGGTTTGTTTTTTAGAGACAAGGATTCTCCGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTTTTTTGCTTGTTGGTTTGTTTTTTAGAGACAAGGATTCTCCGTG  300

seq1  TAGCCCTGGCTGTCCTAGAACTTGCTGTTTAGAGCATGTTGGCTTCAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCCTGGCTGTCCTAGAACTTGCTGTTTAGAGCATGTTGGCTTCAAAC  350

seq1  TCAGAGATCCACCAGTCTGCCTCCTGAGTACTGGGATTAAAGATGTGTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGATCCACCAGTCTGCCTCCTGAGTACTGGGATTAAAGATGTGTGC  400

seq1  CACCACTGCTCAGCTCAGAAGAATCTTAATGAAGAATTATCAAACTCAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACTGCTCAGCTCAGAAGAATCTTAATGAAGAATTATCAAACTCAGT  450

seq1  GGTTCTCAACCTATGGGTTCCAACCCCTTTGGGGGATCAAATGAACTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTCAACCTATGGGTTCCAACCCCTTTGGGGGATCAAATGAACTTTT  500

seq1  CACAGAGGTGGCATAAGACCAACAGAAAACACAGATATTCATATTCAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAGGTGGCATAAGACCAACAGAAAACACAGATATTCATATTCAGAT  550

seq1  TCATAACAATAGTGTAATTACCGTTATGAAGTAGCAGTGAAAATAATCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAACAATAGTGTAATTACCGTTATGAAGTAGCAGTGAAAATAATCTT  600

seq1  ATGGTTGAGGGTCACTACAACACAAGGAACTGCATTAAAGGGTCACAGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTGAGGGTCACTACAACACAAGGAACTGCATTAAAGGGTCACAGCA  650

seq1  TTAGGAAGGCTGAGAACCATCCATCTAGATCATGGCAGCCTATGAGCATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAAGGCTGAGAACCATCCATCTAGATCATGGCAGCCTATGAGCATG  700

seq1  CCTGTT-GGGGGTTGTGTTGATGGTTAATTGATGTGGGAAACCCCATTAC  749
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTGGGGGGTTGTGTTGATGGTTAATTGATGTGGGAAACCCCATTAC  750

seq1  TACTGTCTAGACAGGGGG  767
      ||||||||||||||||||
seq2  TACTGTCTAGACAGGGGG  768