BAC Information

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BAC

Clone NameB6Ng01-197H07
Chromosome12 (Build37)
Map Location 31,877,265 - 31,878,368
singlet/doubletsinglet
Overlap geneLOC100043065
Upstream geneSntg2, Tmem18, LOC100043055, Acp1, Sh3yl1, LOC629656, 9030611O19Rik, LOC668781
Downstream geneLOC100043514, EG629667, LOC100043068, Lamb1-1, Dld, LOC668786, Slc26a3, Cbll1, Slc26a4, LOC100043531, Bcap29, Dus4l, LOC100043081, Gpr22, Hbp1, Prkar2b, Pik3cg
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-197H07.bB6Ng01-197H07.g
ACCGA019315GA019316
length1,1061,249
definitionB6Ng01-197H07.b B6Ng01-197H07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaaaataacttgaaaatcagggtgtattttggcatacggtttc
agtctacaattggctggttccattttttctggacctcagataaatcagac
caaaatggtgtgagggtgacgtggagtagcaggactcgctctatggtggc
taggaagcagagagacaagaaaggggcccagggaaacattagtcccttct
aagacacacccctagtacttatttcttccagccaaaccccgcctcctaat
ttttatcacctccaataactctcatcaaattataaatccaatggagtcat
ctactgatgaaggcagagcctcctgagccaatcacttctcaaaatcccta
ctttttagtaatgctacaatgggaacctagatttcaatgtgtaagcctat
tccagacactacaaatctataccattaatgtgttcttctgccccacgcac
atcagcaactgaaggtataatgataccaagagtagtaacattcagaaagc
agttgattcaagcaacttattaagtctttacttaggttgctcagtaatgt
ttattgagcacttaccacatgccaaacacggttctaagtactacacaggt
aatattgcctttgacctacagtactacagctccatgctcccatgtgtaaa
ttctgatctaatagttgagacagattagagggataccaaggtcatgttat
gaaggaaacatgaaccaagctactaaagatcaagatatttctcttcccct
cccttaccaatatttcccttcctctgtcccctgcagcctgccagtgtcac
ccttagttgggtccagctgcagtctgtttggaggccagtgtcgactgtca
tggcatatgatttaaaaaaaaaaaaaaaactagaaaaaaatgatggttta
cagtgttggtggttttaaaagcaggcaaggagatttgggagattttgaaa
ggagctatagagaatatgacttattgttatactattttttttaaagattt
attaattatctatatgagtaccactgtcccccctcctccacaccacacca
gatgagggatcagatcccattacagacggttgtaggccaccatatggttg
ctggga
gaattctttgtttaggtctgtaccccattttttttgtttttttgtttttt
ttggttttttttttttgagacagggtttctctgtatagctctggctgtcc
tggaactcactttgtagatcaggctggcctcgaactcagaaatctgcctg
cctctgccccccgagtgctgggattaaagacgtgcgccaccacgcccggc
gatgtaccccattttttaatagggttatttgattttctggattccatctt
cttgagttctttttatatatatttataaatattggatattagttccatat
ctgacttaggattggtaaagatcctttcctaatctgttggtggccttttt
gtcttattgacggtgtcttttgccttacagaagctttgcaattttatgag
gtcccatttgtcaattctccagacccctggattttccttttcttgctgct
ctgtgattgaaagggacttacaacttcttcttggaggctagagggatagc
ttaatggttagcagcacatactattttatcagggactcaaaaggacaaga
ttgggaaggtttcaggtagccatctcaaaagggagagatagctcagtgct
taagagcacaagagtacctcttgcagaagagctaggttcagttcccagca
cccatatggtgactttcaactatctattgctccagttctagagagtctgt
gccctcttcttgcttctgaggacaccgggcatgtacgtggtgcccagaca
tccattcaggcaaacacccatttatgtaaaataaaatgagtcttaaaaca
aaacagaaaacctactttctatttgttttgttgctgttgttgttgtgttt
tggtataacatattcaggtcagtcgttgagttttgcttaaaacttgccag
ttaataacagataacaccttttcttctaacataacttatttaggtaaaat
cattagtctttagtatggcccttttgttttttatagtctgcatcttggtt
tttcttcatcatttctgagccattgaaacttgtcttctcttttttttatc
gataacccttgacatactgaaaaatagtcttccttcggcgatccctgggt
gaaatcctgtgcctgccaggaaagtgaaacctttccgaattgggttcagc
ttgctggaagagcttggttctgactgaatcatagctttgcaagtgacaat
atacttctcgcatgttggtgatgctcatacttatctcgtatgtgcagcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_31877265_31878368
seq2: B6Ng01-197H07.b_46_1151

seq1  GAATTCTCAAAATAACTTGAAAATCAGGGTGTATTTTGGCATACGGTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAAAATAACTTGAAAATCAGGGTGTATTTTGGCATACGGTTTC  50

seq1  AGTCTACAATTGGCTGGTTCCATTTTTTCTGGACCTCAGATAAATCAGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTACAATTGGCTGGTTCCATTTTTTCTGGACCTCAGATAAATCAGAC  100

seq1  CAAAATGGTGTGAGGGTGACGTGGAGTAGCAGGACTCGCTCTATGGTGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATGGTGTGAGGGTGACGTGGAGTAGCAGGACTCGCTCTATGGTGGC  150

seq1  TAGGAAGCAGAGAGACAAGAAAGGGGCCCAGGGAAACATTAGTCCCTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAGCAGAGAGACAAGAAAGGGGCCCAGGGAAACATTAGTCCCTTCT  200

seq1  AAGACACACCCCTAGTACTTATTTCTTCCAGCCAAACCCCGCCTCCTAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACACACCCCTAGTACTTATTTCTTCCAGCCAAACCCCGCCTCCTAAT  250

seq1  TTTTATCACCTCCAATAACTCTCATCAAATTATAAATCCAATGGAGTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATCACCTCCAATAACTCTCATCAAATTATAAATCCAATGGAGTCAT  300

seq1  CTACTGATGAAGGCAGAGCCTCCTGAGCCAATCACTTCTCAAAATCCCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGATGAAGGCAGAGCCTCCTGAGCCAATCACTTCTCAAAATCCCTA  350

seq1  CTTTTTAGTAATGCTACAATGGGAACCTAGATTTCAATGTGTAAGCCTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTAGTAATGCTACAATGGGAACCTAGATTTCAATGTGTAAGCCTAT  400

seq1  TCCAGACACTACAAATCTATACCATTAATGTGTTCTTCTGCCCCACGCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGACACTACAAATCTATACCATTAATGTGTTCTTCTGCCCCACGCAC  450

seq1  ATCAGCAACTGAAGGTATAATGATACCAAGAGTAGTAACATTCAGAAAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCAACTGAAGGTATAATGATACCAAGAGTAGTAACATTCAGAAAGC  500

seq1  AGTTGATTCAAGCAACTTATTAAGTCTTTACTTAGGTTGCTCAGTAATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGATTCAAGCAACTTATTAAGTCTTTACTTAGGTTGCTCAGTAATGT  550

seq1  TTATTGAGCACTTACCACATGCCAAACACGGTTCTAAGTACTACACAGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGAGCACTTACCACATGCCAAACACGGTTCTAAGTACTACACAGGT  600

seq1  AATATTGCCTTTGACCTACAGTACTACAGCTCCATGCTCCCATGTGTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTGCCTTTGACCTACAGTACTACAGCTCCATGCTCCCATGTGTAAA  650

seq1  TTCTGATCTAATAGTTGAGACAGATTAGAGGGATACCAAGGTCATGTTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGATCTAATAGTTGAGACAGATTAGAGGGATACCAAGGTCATGTTAT  700

seq1  GAAGGAAACATGAACCAAGCTACTAAAGATCAAGATATTTCTCTTCCCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAAACATGAACCAAGCTACTAAAGATCAAGATATTTCTCTTCCCCT  750

seq1  CCCTTACCAATATTTCCCTTCCTCTGTCCCCTGCAGCCTGCCAGTGTCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTACCAATATTTCCCTTCCTCTGTCCCCTGCAGCCTGCCAGTGTCAC  800

seq1  CCTTAGTTGGGTCCAGCTGCAGTCTGTTTGGAGGCCAGTGTCGACTGTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGTTGGGTCCAGCTGCAGTCTGTTTGGAGGCCAGTGTCGACTGTCA  850

seq1  TGGCATATGATTT-AAAAAAAAAAAAAAACTAGAAAAAAAATGATGGTTT  899
      ||||||||||||| ||||||||||||||||||| ||||||||||||||||
seq2  TGGCATATGATTTAAAAAAAAAAAAAAAACTAG-AAAAAAATGATGGTTT  899

seq1  ACAGTGTTGGTGGTTTTAAAAGCAGGCAAGGAGATTTGGGAGATTTTGAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGTTGGTGGTTTTAAAAGCAGGCAAGGAGATTTGGGAGATTTTGAA  949

seq1  AGGAGGCTATAGAGAATATGAC-TATTGTTATACTA-TTTTTTTAAAGAT  997
      |||| ||||||||||||||||| ||||||||||||| |||||||||||||
seq2  AGGA-GCTATAGAGAATATGACTTATTGTTATACTATTTTTTTTAAAGAT  998

seq1  TTATTTATTTATTTTATATGAGTA-CACTGT-CACCCTCCT-CACA-CAC  1043
      ||||| |||   | |||||||||| |||||| | ||||||| |||| |||
seq2  TTATTAATT--ATCTATATGAGTACCACTGTCCCCCCTCCTCCACACCAC  1046

seq1  ACCAGATGAGGGGATCAGATCCCATTACAGACGGTTGTAAGCCACCATAT  1093
      ||||||||| ||||||||||||||||||||||||||||| ||||||||||
seq2  ACCAGATGA-GGGATCAGATCCCATTACAGACGGTTGTAGGCCACCATAT  1095

seq1  GGTTGCTGGGA  1104
      |||||||||||
seq2  GGTTGCTGGGA  1106