BAC Information

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BAC

Clone NameB6Ng01-199B20
Chromosome12 (Build37)
Map Location 64,881,557 - 64,882,721
singlet/doubletsinglet
Overlap genenone
Upstream geneEG665741, EG382606
Downstream geneLOC435302, EG623046
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-199B20.bB6Ng01-199B20.g
ACCGA020535GA020536
length1,1541,171
definitionB6Ng01-199B20.b B6Ng01-199B20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccagagacctgagatgggagaggtctccaggaggcaatgaggtg
accttagcccatatgcctaacagtggggacatggaacctaaagaggccac
ctactgtagccaggcagaatccccagttgatggataagtacatcaataca
cccatagaacttttgacctaaaatatctgctgtctacactagaatgaatg
gtacagtctataataggtccctttcaaagaggaaatatccatgagattat
gtgttgaaaaatataaggaaattaatatggagttacagaaataaacagag
aattattgttttgtgtagtggagtatgcttctgatagcttatactaaagc
tcttttagggtctattacttgaaataattatagagagaaactatatgaag
taaaaacatcagattaacataatttgtataagggaaaaagatctatttgt
aaaagatgtcaaaatttattctaaaactctagtgcattagtctgggttct
ctagattcactgaaattatggattgtctcaatatattaaggggatttatt
gtaatgacctacaattggcagtccaactaactcaaaaatgtgagtgggaa
atttgagaatctagtagttgctcagacccacaagcctagttgtttcagag
gatcttctgtagaaggtagggcccagattaaaaattggaacttgctctgt
cacaagctgttctttaacaaagagatatgcctgtgcctcagtctcctggg
attaaagacttgtactaccttaccagggcctaaattttcatgactactat
gcctcaagacctagatcaaaagtatgtgtcatcccaagttgagaactgtg
tcagaagcctgtgtctttcagcctcaagttctgtattacaggtgtgccct
ccatttctgggttgtagttcaatccagaggtaatcaagttaacaacagga
atagccatcacacatagtaatccaatttgttgcttagtctatgtcactgg
gacatatactggtaaatctacattgtagatctactcatcactctgataga
tcagtatcatatcatatgatcatagtacttatttatgttcttaaaggctg
ttcatttatatgcatatgatcaaccaacccaacgggagcgtcactgatcc
ctgt
gaattctgtcttcttcctctttaattacccaggcaccatctggcttagat
ttctgcagtttctgtccatgtgccacagtctgtgagttcagatatgtgtg
agtcctattgtatctagaaggtcttggtattctctatccaactcctcact
ggatctcacactctcactccttcctctttattatagttccctgatctctg
ttttagattgagtattccaaggtttctcacccagcacattgtctgtaagt
ctctatatctgttcatatctactgagaagaagccattaggaatcatttaa
ttgctatgctcatttagcagatggtaggatttggttttcccctaggtcaa
tcgcttgtttatttctcttctttgtgtaattttttaaatttattcttttc
tcttctctccacatccactctccctctgttttccttcagaaaagggcagg
caccccagggatatcaaccaaatttggcatatcaagttgcaagaaataga
caactccattcatattaaggcttgacaaggcaacccaatagaaataacat
ggtcctgaagtcaggcaaaagagtctgagtcagccctgctccctctgtca
taaaagcaccaagctagaaatttgtaacatagatgtacagggcctaggtc
agacccatgatagctccctgatcatcagttcagattctgtgagccctgat
ttgcccaggttagttgactctgtgagttttctttggtgtctatccttcaa
cttctttgctccatcttccacatcttccacaggaatcctcgagctccacc
taatgttgcctatgcttctgttatgttctttgagcttctagattaaaggc
tctttgatgcagatccatgacttttttgatttgatatttttgaagcctct
agcaaaggttccatctaatggggtgggcattagttccatagatagtggct
agttatccccccagttattgtaccagtattgtaccactatgcagtgacta
gcagcagcacaactgtagtttacagagttgtagtggggttgtgttacttt
cttctgtagtggtgcaaggtactttcagtattgcagacaattagtcataa
tgggtgaggtccactggagagtgtaaatgtacgtctctcgccataaaggc
ttgtgctacatatttaatgcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_64881557_64882721
seq2: B6Ng01-199B20.b_44_1197

seq1  GAATTCCCAGAGACCTGAGATGGGAGAGGTCTCCAGGAGGCAATGAGGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAGAGACCTGAGATGGGAGAGGTCTCCAGGAGGCAATGAGGTG  50

seq1  ACCTTAGCCCATATGCCTAACAGTGGGGACATGGAACCTAAAGAGGCCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTAGCCCATATGCCTAACAGTGGGGACATGGAACCTAAAGAGGCCAC  100

seq1  CTACTGTAGCCAGGCAGAATCCCCAGTTGATGGATAAGTACATCAATACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGTAGCCAGGCAGAATCCCCAGTTGATGGATAAGTACATCAATACA  150

seq1  CCCATAGAACTTTTGACCTAAAATATCTGCTGTCTACACTAGAATGAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATAGAACTTTTGACCTAAAATATCTGCTGTCTACACTAGAATGAATG  200

seq1  GTACAGTCTATAATAGGTCCCTTTCAAAGAGGAAATATCCATGAGATTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGTCTATAATAGGTCCCTTTCAAAGAGGAAATATCCATGAGATTAT  250

seq1  GTGTTGAAAAATATAAGGAAATTAATATGGAGTTACAGAAATAAACAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGAAAAATATAAGGAAATTAATATGGAGTTACAGAAATAAACAGAG  300

seq1  AATTATTGTTTTGTGTAGTGGAGTATGCTTCTGATAGCTTATACTAAAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTGTTTTGTGTAGTGGAGTATGCTTCTGATAGCTTATACTAAAGC  350

seq1  TCTTTTAGGGTCTATTACTTGAAATAATTATAGAGAGAAACTATATGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTAGGGTCTATTACTTGAAATAATTATAGAGAGAAACTATATGAAG  400

seq1  TAAAAACATCAGATTAACATAATTTGTATAAGGGAAAAAGATCTATTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACATCAGATTAACATAATTTGTATAAGGGAAAAAGATCTATTTGT  450

seq1  AAAAGATGTCAAAATTTATTCTAAAACTCTAGTGCATTAGTCTGGGTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATGTCAAAATTTATTCTAAAACTCTAGTGCATTAGTCTGGGTTCT  500

seq1  CTAGATTCACTGAAATTATGGATTGTCTCAATATATTAAGGGGATTTATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATTCACTGAAATTATGGATTGTCTCAATATATTAAGGGGATTTATT  550

seq1  GTAATGACCTACAATTGGCAGTCCAACTAACTCAAAAATGTGAGTGGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGACCTACAATTGGCAGTCCAACTAACTCAAAAATGTGAGTGGGAA  600

seq1  ATTTGAGAATCTAGTAGTTGCTCAGACCCACAAGCCTAGTTGTTTCAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAGAATCTAGTAGTTGCTCAGACCCACAAGCCTAGTTGTTTCAGAG  650

seq1  GATCTTCTGTAGAAGGTAGGGCCCAGATTAAAAATTGGAACTTGCTCTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTCTGTAGAAGGTAGGGCCCAGATTAAAAATTGGAACTTGCTCTGT  700

seq1  CACAAGCTGTTCTTTAACAAAGAGATATGCCTGTGCCTCAGTCTCCTGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGCTGTTCTTTAACAAAGAGATATGCCTGTGCCTCAGTCTCCTGGG  750

seq1  ATTAAAGACTTGTACTACCTTACCAGGGCCTAAATTTTCATGACTACTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGACTTGTACTACCTTACCAGGGCCTAAATTTTCATGACTACTAT  800

seq1  GCCTCAAGACCTAGATCAAAAGTATGTGTCATCCCAAGTTGAGAACTGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAAGACCTAGATCAAAAGTATGTGTCATCCCAAGTTGAGAACTGTG  850

seq1  TCAGAAGCCTGTGTCTTTCAGCCTCAAGTTCTGTATTACAGGTGTGCCCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAGCCTGTGTCTTTCAGCCTCAAGTTCTGTATTACAGGTGTGCCCT  900

seq1  CCATTTCTGGGTTGTAGTTCAATCCAGAGGTAATCAAGTTAACAACAGGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CCATTTCTGGGTTGTAGTTCAATCCAGAGGTAATCAAGTTAACAACA-GG  949

seq1  AATAGCCATCACACATAGTAAATCCAATTTTGTTGCTTAGTCTATGTCAC  1000
      ||||||||||||||||||| ||||||| ||||||||||||||||||||||
seq2  AATAGCCATCACACATAGT-AATCCAA-TTTGTTGCTTAGTCTATGTCAC  997

seq1  TGGGACATATACTTGGTAAAATCTACATTGGTAGAATCTACTCATCACTC  1050
      |||||||||||| |||| ||||||||||| |||| |||||||||||||||
seq2  TGGGACATATAC-TGGT-AAATCTACATT-GTAG-ATCTACTCATCACTC  1043

seq1  TGATAGAATCAGTATTCATATCATATGATTCATAGTTAACTATTTATGTT  1100
      |||||| ||||||| ||||||||||||| |||||| ||  ||||||||||
seq2  TGATAG-ATCAGTA-TCATATCATATGA-TCATAG-TACTTATTTATGTT  1089

seq1  CTT-AAGGCTTTTCATTTAATAATGC-TATAGTCCACAAACCCAA-AGGA  1147
      ||| |||||| ||||||||   |||| |||  || || |||||||  |||
seq2  CTTAAAGGCTGTTCATTTA--TATGCATATGATCAACCAACCCAACGGGA  1137

seq1  GCACTCACTGATCCCTGT  1165
      ||  ||||||||||||||
seq2  GC-GTCACTGATCCCTGT  1154