BAC Information

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BAC

Clone NameB6Ng01-199J06
Chromosome12 (Build37)
Map Location 68,643,960 - 68,644,886
singlet/doubletsinglet
Overlap genenone
Upstream geneMdga2, LOC100040745
Downstream geneLOC100040681
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-199J06.bB6Ng01-199J06.g
ACCGA020875GA020876
length1,246926
definitionB6Ng01-199J06.b B6Ng01-199J06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttacaatgtcctggggtgtgtggactatacaatagactagaat
tagaactatgacaagggcatgaagcccttgcccctggcttttaagattaa
gctgaccttaggtggggctgcttttgatcttaattgttaacatggattat
cccagttggttcctgttagcttttaagtacgcattcctctgttttgttgt
aaaggtaattttgcctcagataacttcaatgtaccttaaatggtcttaat
gtatcacttaatttctttgttttctgtaacataaaaggctgatgctcaat
ttgataaagatgcattcagataccacactcccttgtgtcttgtgtcttgt
gtctgtcacccccttttcgttgccaactccttgcctacctgtaaccggaa
cacccccaatccccaatttcttccggggcatacatggaagctgaacaaca
ctctactcaatgataacttggtcaagtgagaatgaaagaaattaaagcct
ttttagaatttaatgaaaatgaagacacatcatatcaaaatttatggaca
caatgaaagcagtggtaagagaaaattcatagctcgaagtgcctccaaaa
aagaaactggagagagcttacactcgcagcttgacagcacacctgagagc
tctagaacaaaaagaagcaaattcacccaagaggcatagatggcaggaaa
taatcaaactcaaggctgaaattaatcaagtagaaacaaaaagaactatg
caaagaatcaaccaaaccaggagctggttcttttgagaaaaaccaagata
gataaacccttagccagactaaccagaaaggcacagagacagtatccaaa
ttaataaaatcagaaatgaaaaggcagacaaaacaatgaaatatatctta
atattcaacaaacagagtaattattttaacagttgaacatatttaaagta
atgcttctaataaacattaatgggaaataataaattgaataattttcctc
aactgttgccttggaaatcatttttctttaaatgttttaaagaacaaaag
aatttttttgccttatttttaaaatgtttaaaaaaatacctgaataagaa
atttatatcctccctaagaaacattggattatcttttaggtaatcttgat
tatagaaacaatgcacacggatttattataatggtgcttttataccttta
actaatgtccaagggggataatctcatataaataggcctttggcca

gaattcataatctcctgcacattccatgctaagaatttgaatgacttgtt
ttgtacaggtcttatgcatgcacgcacagcagccgtgagtacatgggtgc
aacgtcttcaaacagaaaactaaacaacaataacacaaacctcaaaaact
caaacaagagtgttaaatgtgtttgcgactggttatacttcaaactttct
tttattttctcctccatgactgatctttgttctagagcctaacaaatgca
aagaatcctgtgctcccaccacagtaatgtttataaatctcacatatgtt
gtgcctttgtgaatgtctcaatcctcaattctgacataaaattattttga
aggtatttacttactcttttcttgttttcattgtttctcatgaaattttc
cttctacttatacatgtgttcatttatatatatttgttctataagtactt
taaatgtttcttctttacatcaaaatcaagttatataaaactaatatgat
aacaagttctaatcaaggtacttggacattatcctttttgagtgtgctgc
tttgactctctatgtggatctagagcaataaaagatttaagatttattct
tcccatctaaatgaatgtgtttcttttcaacacttagtctgtttaatgtt
tcataacatattaagtaacatgagttatctggaagaaaagacattattta
tggcattgtttaagcataaattaaaatgttatcctagcttttgttaggtg
ggtgggttgtttgattttggtctgggcttagttctctgttgcaaggacta
tatctcccatgcatttggggattcatcccttggtgagaagggttaggagg
atgttcttcctgcctatgaattctctcagttatgctgttacttctatgcc
atctggggaacgtttacttttacttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_68643960_68644886
seq2: B6Ng01-199J06.g_63_988

seq1  GAATTCATAATCTCCTGCACATTCCATGCTAAGAATTTGAATGACTTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAATCTCCTGCACATTCCATGCTAAGAATTTGAATGACTTGTT  50

seq1  TTGTACAGGTCTTATGCATGCACGCACAGCAGCCGTGAGTACATGGGTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACAGGTCTTATGCATGCACGCACAGCAGCCGTGAGTACATGGGTGC  100

seq1  AACGTCTTCAAACAGAAAACTAAACAACAATAACACAAACCTCAAAAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTCTTCAAACAGAAAACTAAACAACAATAACACAAACCTCAAAAACT  150

seq1  CAAACAAGAGTGTTAAATGTGTTTGCGACTGGTTATACTTCAAACTTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAGAGTGTTAAATGTGTTTGCGACTGGTTATACTTCAAACTTTCT  200

seq1  TTTATTTTCTCCTCCATGACTGATCTTTGTTCTAGAGCCTAACAAATGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTCTCCTCCATGACTGATCTTTGTTCTAGAGCCTAACAAATGCA  250

seq1  AAGAATCCTGTGCTCCCACCACAGTAATGTTTATAAATCTCACATATGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATCCTGTGCTCCCACCACAGTAATGTTTATAAATCTCACATATGTT  300

seq1  GTGCCTTTGTGAATGTCTCAATCCTCAATTCTGACATAAAATTATTTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTTTGTGAATGTCTCAATCCTCAATTCTGACATAAAATTATTTTGA  350

seq1  AGGTATTTACTTACTCTTTTCTTGTTTTCATTGTTTCTCATGAAATTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATTTACTTACTCTTTTCTTGTTTTCATTGTTTCTCATGAAATTTTC  400

seq1  CTTCTACTTATACATGTGTTCATTTATATATATTTGTTCTATAAGTACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTACTTATACATGTGTTCATTTATATATATTTGTTCTATAAGTACTT  450

seq1  TAAATGTTTCTTCTTTACATCAAAATCAAGTTATATAAAACTAATATGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGTTTCTTCTTTACATCAAAATCAAGTTATATAAAACTAATATGAT  500

seq1  AACAAGTTCTAATCAAGGTACTTGGACATTATCCTTTTTGAGTGTGCTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGTTCTAATCAAGGTACTTGGACATTATCCTTTTTGAGTGTGCTGC  550

seq1  TTTGACTCTCTATGTGGATCTAGAGCAATAAAAGATTTAAGATTTATTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACTCTCTATGTGGATCTAGAGCAATAAAAGATTTAAGATTTATTCT  600

seq1  TCCCATCTAAATGAATGTGTTTCTTTTCAACACTTAGTCTGTTTAATGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATCTAAATGAATGTGTTTCTTTTCAACACTTAGTCTGTTTAATGTT  650

seq1  TCATAACATATTAAGTAACATGAGTTATCTGGAAGAAAAGACATTATTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAACATATTAAGTAACATGAGTTATCTGGAAGAAAAGACATTATTTA  700

seq1  TGGCATTGTTTAAGCATAAATTAAAATGTTATCCTAGCTTTTGTTAGGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATTGTTTAAGCATAAATTAAAATGTTATCCTAGCTTTTGTTAGGTG  750

seq1  GGTGGGTTGTTTGATTTTGGTCTGGGCTTAGTTCTCTGTTGCAAGGACTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGTTGTTTGATTTTGGTCTGGGCTTAGTTCTCTGTTGCAAGGACTA  800

seq1  TATCTCCCATGCATTTGGGGATTCATCCCTTGGTGAGAA-GGTTAGGAGG  849
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TATCTCCCATGCATTTGGGGATTCATCCCTTGGTGAGAAGGGTTAGGAGG  850

seq1  ATGTTCTTCCTGCCTTATGAATTCTCTCAGTAATGCTGTTACTTCTATGC  899
      |||||||||||||| |||||||||||||||| ||||||||||||||||||
seq2  ATGTTCTTCCTGCC-TATGAATTCTCTCAGTTATGCTGTTACTTCTATGC  899

seq1  CATCTGGGGAACGTTTTACTTTTACTTT  927
      ||||||||||||| ||||||||||||||
seq2  CATCTGGGGAACG-TTTACTTTTACTTT  926


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