BAC Information

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BAC

Clone NameB6Ng01-199P10
Chromosome12 (Build37)11 (Build37)
Map Location 95,491,967 - 95,492,01591,705,888 - 91,706,906
singlet/doubletsingletsinglet
Overlap genenone
Upstream gene2610022K04Rik-ps, EG633639
Downstream geneLOC217786, LOC100039603
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-199P10.bB6Ng01-199P10.g
ACCGA021155GA021156
length9621,076
definitionB6Ng01-199P10.b B6Ng01-199P10.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(95,491,967 - 95,492,015)(91,705,888 - 91,706,906)
sequence
gaattcttttttttttcaagaattctttgtttacctctgtaccccaattt
taataaagttatttgattgtctagagtctaatttcttcagttctttgtat
atattggatattacctctctattggataaaagattggtaaagatcttctc
caaatctgttggttgccatgttgtcctattgactgtgtaccttatatata
ctgaggaaatccaaaaaatcatcagatcttactacaaaagcctatgctca
acaaaactgaaaaatctggatgaaatggacagagaacaggtaccaaagtt
aaatcaggattagataaaccattgaaactgtcctataacccctaaagaaa
tagcatcagtcattaaaagtctccataacaaaaaaacaaacaaacaaaca
aacaaaaaaagccaggataaggtagttttagtgcagaattctatcagatc
ttcaaagaagacctaataccaattctcttcaaactagtccacaaaataga
aacagaaggaacactacccaaatcgtgctatgaagccacaattacactta
tacctaaaccacagaaaggcccaacaaagaaagagaacttcagaccaatt
tctcttatgagtatcaatggaacaatactcaataaagttctcgcaaactg
aatccaagaatacaacaaaacaatcatacatcatgatcaagtaggcttta
tcccagggatacagggatgatttattatactgaaatccatcaatgtaatc
cactatataaacaaactcagatgaaaagaaaacctcgtgatcgtctcatt
agattctgagaagagatttgacaaaattcaacacctcttcatggtaaaaa
tcttggaaatatcaagaattcaagacccatacctaaacatagtaaagtat
acaacaaaacaatagccaacatcaaactaacctggacagaacttgaagca
atccccactaaa
gaattctttacttttactaaagtcatacatatttgtggtgttattccttt
taggcttctggtttatgtttgtaaacttgacccaactggagttctaggcc
tggtggcacaatggttctatctgctgattcaaaagccaccttgatgtttg
atctcatctaaatatgccagccaaatttgtatgtatatgaattctctcat
ctcatctttcagataattgtgctaaattttcttaaattatatttttattt
tgttctttctgtataaatggtttatattgaaaaatatatgaccaaaggaa
acacatggtcttcaaaccatcagttcaatgttttccatgtggttgactaa
acttcctgaaatggcagagataaaattaatacaattatatacgtgacaat
tacccatgtctctcaaatttgaaaataaaatgtaaatttttgaaaataat
agctagtgtattttttatttcaaaatataatttttgaaaattgtattcat
ttatatatataaagtattttcttcctgtcactctattatctacactgata
ctctcacaaattctatttttgtgtcttgatctatactttttaatctatat
gtatatatagattatatagtttttatataatattaatgggtagataggtg
atatagatatatctctaagaatttcatacaccatattataattatattca
ctgacaattctcttatttctctcaggtccattctcactttgttacccatg
ctggcttcatgtcctcattattttgttttattcttgatgtaataaactcc
aatttatgctgtccccactgctgatgtagtgccatgctatgaagcatgga
tgacctatcataagctatgaacttgaaataaacttattctcccttgggaa
gctttcagttgttcatagctcctttgttaaaggttgggggcttatgggcc
ctttcgcacttcttgctgaaatactggctgcccttgatcttgtacaggca
caaaaggttgcttggagttcatgagtactgacatcctgtcacggtccagg
agggatgggtttgggttccaatttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_95491967_95492015
seq2: B6Ng01-199P10.b_418_454

seq1  AACAAGAAAAACAAACAACCCTCCAGAAAACAAACAAACAAAAAAAGCC  49
      ||||| ||||||||||           ||||||||||||||||||||||
seq2  AACAA-AAAAACAAAC-----------AAACAAACAAACAAAAAAAGCC  37

seq1: chr11_91705888_91706906
seq2: B6Ng01-199P10.g_111_1139 (reverse)

seq1  AGAAATT-GAACC--AAACCATCC--TCTGGA-CGTGACAGGATGTCAGT  44
      ||||||| |||||  || ||||||   ||||| |||||||||||||||||
seq2  AGAAATTGGAACCCAAACCCATCCCTCCTGGACCGTGACAGGATGTCAGT  50

seq1  ACTCATGAACT-CAAGCAACTTTTGTTGCCTGTACAAGATCAA-GGCAGC  92
      ||||||||||| |||||||| |||  ||||||||||||||||| ||||||
seq2  ACTCATGAACTCCAAGCAACCTTTTGTGCCTGTACAAGATCAAGGGCAGC  100

seq1  CAGTATTTCAGCAAGAAGTGCGAAAGGGCCCATAAG-CCCCAACCTTTAA  141
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CAGTATTTCAGCAAGAAGTGCGAAAGGGCCCATAAGCCCCCAACCTTTAA  150

seq1  CAAAGGAGCTATGAACAACTGAAAGCTT-CCAAGGGAGAATAAGTTTATT  190
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CAAAGGAGCTATGAACAACTGAAAGCTTCCCAAGGGAGAATAAGTTTATT  200

seq1  TCAAGTTCATAGCTTATGATAGGTCATCCATGCTTCATAGCATGGCACTA  240
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTTCATAGCTTATGATAGGTCATCCATGCTTCATAGCATGGCACTA  250

seq1  CATCAGCAGTGGGGACAGCATAAATTGGAGTTTATTACATCAAGAATAAA  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGCAGTGGGGACAGCATAAATTGGAGTTTATTACATCAAGAATAAA  300

seq1  ACAAAATAATGAGGACATGAAGCCAGCATGGGTAACAAAGTGAGAATGGA  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATAATGAGGACATGAAGCCAGCATGGGTAACAAAGTGAGAATGGA  350

seq1  CCTGAGAGAAATAAGAGAATTGTCAGTGAATATAATTATAATATGGTGTA  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGAGAAATAAGAGAATTGTCAGTGAATATAATTATAATATGGTGTA  400

seq1  TGAAATTCTTAGAGATATATCTATATCACCTATCTACCCATTAATATTAT  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTCTTAGAGATATATCTATATCACCTATCTACCCATTAATATTAT  450

seq1  ATAAAAACTATATAATCTATATATACATATAGATTAAAAAGTATAGATCA  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAACTATATAATCTATATATACATATAGATTAAAAAGTATAGATCA  500

seq1  AGACACAAAAATAGAATTTGTGAGAGTATCAGTGTAGATAATAGAGTGAC  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACAAAAATAGAATTTGTGAGAGTATCAGTGTAGATAATAGAGTGAC  550

seq1  AGGAAGAAAATACTTTATATATATAAATGAATACAATTTTCAAAAATTAT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGAAAATACTTTATATATATAAATGAATACAATTTTCAAAAATTAT  600

seq1  ATTTTGAAATAAAAAATACACTAGCTATTATTTTCAAAAATTTACATTTT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGAAATAAAAAATACACTAGCTATTATTTTCAAAAATTTACATTTT  650

seq1  ATTTTCAAATTTGAGAGACATGGGTAATTGTCACGTATATAATTGTATTA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCAAATTTGAGAGACATGGGTAATTGTCACGTATATAATTGTATTA  700

seq1  ATTTTATCTCTGCCATTTCAGGAAGTTTAGTCAACCACATGGAAAACATT  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATCTCTGCCATTTCAGGAAGTTTAGTCAACCACATGGAAAACATT  750

seq1  GAACTGATGGTTTGAAGACCATGTGTTTCCTTTGGTCATATATTTTTCAA  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGATGGTTTGAAGACCATGTGTTTCCTTTGGTCATATATTTTTCAA  800

seq1  TATAAACCATTTATACAGAAAGAACAAAATAAAAATATAATTTAAGAAAA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAACCATTTATACAGAAAGAACAAAATAAAAATATAATTTAAGAAAA  850

seq1  TTTAGCACAATTATCTGAAAGATGAGATGAGAGAATTCATATACATACAA  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCACAATTATCTGAAAGATGAGATGAGAGAATTCATATACATACAA  900

seq1  ATTTGGCTGGCATATTTAGATGAGATCAAACATCAAGGTGGCTTTTGAAT  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGCTGGCATATTTAGATGAGATCAAACATCAAGGTGGCTTTTGAAT  950

seq1  CAGCAGATAGAACCATTGTGCCACCAGGCCTAGAACTCCAGTTGGGTCAA  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGATAGAACCATTGTGCCACCAGGCCTAGAACTCCAGTTGGGTCAA  1000

seq1  GTTTACAAACATAAACCAGAAGCCTAAAA  1019
      |||||||||||||||||||||||||||||
seq2  GTTTACAAACATAAACCAGAAGCCTAAAA  1029