BAC Information

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BAC

Clone NameB6Ng01-205B15
Chromosome12 (Build37)
Map Location 72,841,864 - 72,960,268
singlet/doubletdoublet
Overlap geneDaam1, LOC666213
Upstream geneFrmd6, Actr10, Psma3, 3110056K07Rik, Arid4a, Timm9, LOC100041035, 2700049A03Rik, LOC666162, Dact1, LOC100041190
Downstream geneLOC666220, Gpr135, LOC100041239, 2810055F11Rik, 1200003C05Rik, 4930403N07Rik, Rtn1, Lrrc9, 1810048J11Rik, LOC209183, LOC100041323, Dhrs7, LOC100041157, 5033425G24Rik, Ppm1a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205B15.bB6Ng01-205B15.g
ACCGA024872GA024873
length2451,178
definitionB6Ng01-205B15.b B6Ng01-205B15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,960,024 - 72,960,268)(72,841,864 - 72,843,029)
sequence
agatagaactcagtgtttgcactgtcaccatcaaacagcatgagaaagac
tgcaggtatgaattcccaggccagccaaactgaatttcacacagacaaga
atgaactgtttccttagtagaaacttgtgtgtgtgtgtgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtttacgcacggttgcaacccttgatcatcaaat
tctctgaattgttaatcacttggcagccaattgtggaaagctgaa
gaattccagaaccaatgaataagaaagcaggggcagaggtttaagaagag
tcttttgtgtagatttattgacaggagtcaatagaaagaggggttttctg
ggaaagaataaaatactcatgggtcctgcttcactcagtatcttagccag
ggctgagggtctattttagtgactctcagatttcacctcaaaggattgct
aagaaatgtatttgtctcttttccatattttctgacagatgtgactgtgg
ctccaggaaagccttggggacaatcacaagtggagaagataatagccaca
aaggctgccggatgcagttaagatgccttttctgatacataggatatctt
atgagattcttagaaaactgtaggtttaaggctggaaagggagaaagacc
attttcacattcttacctgaaacttctttatgaagaaggaatattgtctc
tgtgtaggtaaccctcccccttccccatatattgctagtcctgctaaaac
tcttgactctcggctgccaaaggcttccaccaaactctggggtgagggga
ccctcttcttacctgtgttccctttatgtccctgtctttctatcctgcct
tggtactggagaataggacacaggcaatctcactctaactgtttcaaaca
tcatagaagtaaattctttaagttacagcttgacatctagtttaaggtga
tcgattccatttgctcctttgtctgaggcatgctttttttttttttttag
ctcttttagcagacttcttgttccctacaagaaatgaaacaggctaacag
ccttctctaggctcacttagaatctctaaaggctaagtttctttagaagg
gggggagggagacaatctagttgataagagggagggattgcaacctgtta
tcgactgggaagacttgctaaataaaaagtgctttctttactggagcaac
ggaccattttcgaaaggtgttagtaaagcagatgaaaatacacacgaggg
cagcgtttgggtcttggaaggtctgtgtgagaggaatgtcagaaagacac
gtgcttgaatgactaggtcatcgtagtttctttagagtctccccatttgc
tcatgcagcaggttaccctagcactcctgtgcccttgccgtggtgaatct
ggccacttggcatgcaaatcggaagaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_72960024_72960268
seq2: B6Ng01-205B15.b_57_301 (reverse)

seq1  TTCAGCTTTCCACACTTGGCTGCCAAGTTATTAACACTTCAGAGAATTTG  50
      |||||||||||||| ||||||||||||| ||||||| |||||||||||||
seq2  TTCAGCTTTCCACAATTGGCTGCCAAGTGATTAACAATTCAGAGAATTTG  50

seq1  ATGCTCAAGGGTTGCAACTGTGTGAAAACACACACACACACACACACACA  100
      ||| |||||||||||||| ||| | |||||||||||||||||||||||||
seq2  ATGATCAAGGGTTGCAACCGTGCGTAAACACACACACACACACACACACA  100

seq1  CACACACACACACACACACAAGTTTCTACTAAGGAAACAGTTCATTCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACAAGTTTCTACTAAGGAAACAGTTCATTCTTG  150

seq1  TCTGTGTGAAATTCAGTTTGGCTGGCCTGGGAATTCATACCTGCAGTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTGAAATTCAGTTTGGCTGGCCTGGGAATTCATACCTGCAGTCTT  200

seq1  TCTCATGCTGTTTGATGGTGACAGTGCAAACACTGAGTTCTATCT  245
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATGCTGTTTGATGGTGACAGTGCAAACACTGAGTTCTATCT  245

seq1: chr12_72841864_72843029
seq2: B6Ng01-205B15.g_70_1247

seq1  GAATTCCAGAACCAATGAATAAGAAAGCAGGGGCAGAGGTTTAAGAAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAACCAATGAATAAGAAAGCAGGGGCAGAGGTTTAAGAAGAG  50

seq1  TCTTTTGTGTAGATTTATTGACAGGAGTCAATAGAAAGAGGGGTTTTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGTGTAGATTTATTGACAGGAGTCAATAGAAAGAGGGGTTTTCTG  100

seq1  GGAAAGAATAAAATACTCATGGGTCCTGCTTCACTCAGTATCTTAGCCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGAATAAAATACTCATGGGTCCTGCTTCACTCAGTATCTTAGCCAG  150

seq1  GGCTGAGGGTCTATTTTAGTGACTCTCAGATTTCACCTCAAAGGATTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAGGGTCTATTTTAGTGACTCTCAGATTTCACCTCAAAGGATTGCT  200

seq1  AAGAAATGTATTTGTCTCTTTTCCATATTTTCTGACAGATGTGACTGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATGTATTTGTCTCTTTTCCATATTTTCTGACAGATGTGACTGTGG  250

seq1  CTCCAGGAAAGCCTTGGGGACAATCACAAGTGGAGAAGATAATAGCCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGGAAAGCCTTGGGGACAATCACAAGTGGAGAAGATAATAGCCACA  300

seq1  AAGGCTGCCGGATGCAGTTAAGATGCCTTTTCTGATACATAGGATATCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTGCCGGATGCAGTTAAGATGCCTTTTCTGATACATAGGATATCTT  350

seq1  ATGAGATTCTTAGAAAACTGTAGGTTTAAGGCTGGAAAGGGAGAAAGACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGATTCTTAGAAAACTGTAGGTTTAAGGCTGGAAAGGGAGAAAGACC  400

seq1  ATTTTCACATTCTTACCTGAAACTTCTTTATGAAGAAGGAATATTGTCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCACATTCTTACCTGAAACTTCTTTATGAAGAAGGAATATTGTCTC  450

seq1  TGTGTAGGTAACCCTCCCCCTTCCCCATATATTGCTAGTCCTGCTAAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAGGTAACCCTCCCCCTTCCCCATATATTGCTAGTCCTGCTAAAAC  500

seq1  TCTTGACTCTCGGCTGCCAAAGGCTTCCACCAAACTCTGGGGTGAGGGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGACTCTCGGCTGCCAAAGGCTTCCACCAAACTCTGGGGTGAGGGGA  550

seq1  CCCTCTTCTTACCTGTGTTCCCTTTATGTCCCTGTCTTTCTATCCTGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTTCTTACCTGTGTTCCCTTTATGTCCCTGTCTTTCTATCCTGCCT  600

seq1  TGGTACTGGAGAATAGGACACAGGCAATCTCACTCTAACTGTTTCAAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTACTGGAGAATAGGACACAGGCAATCTCACTCTAACTGTTTCAAACA  650

seq1  TCATAGAAGTAAATTCTTTAAGTTACAGCTTGACATCTAGTTTAAGGTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGAAGTAAATTCTTTAAGTTACAGCTTGACATCTAGTTTAAGGTGA  700

seq1  TCGATTCCATTTGCTCCTTTGTCTGAGGCATGC-TTTTTTTTTTTTTTAG  749
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TCGATTCCATTTGCTCCTTTGTCTGAGGCATGCTTTTTTTTTTTTTTTAG  750

seq1  CTCTTTTAGCAGACTTCTTGTTCCCTACAAGAAATGAAACAGGCTAACAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTTAGCAGACTTCTTGTTCCCTACAAGAAATGAAACAGGCTAACAG  800

seq1  CCTTCTCTAGGCTCACTTAGAATCTCTAAAGGCTAAGTTTC-TTAGAA-G  847
      ||||||||||||||||||||||||||||||||||||||||| |||||| |
seq2  CCTTCTCTAGGCTCACTTAGAATCTCTAAAGGCTAAGTTTCTTTAGAAGG  850

seq1  GGGGGAGGGAGACAATCTAGTTGATAAGA-GGAAGGATTGCAACCTGTTA  896
      ||||||||||||||||||||||||||||| ||| ||||||||||||||||
seq2  GGGGGAGGGAGACAATCTAGTTGATAAGAGGGAGGGATTGCAACCTGTTA  900

seq1  TCGACT-GGAAGACTTGCTAAATAAAAAGTGCTTTCTTAACT-GAGC-AC  943
      |||||| ||||||||||||||||||||||||||||||| ||| |||| ||
seq2  TCGACTGGGAAGACTTGCTAAATAAAAAGTGCTTTCTTTACTGGAGCAAC  950

seq1  GGACTA-TTTCGAAA-GTGTTAGT-AAGCAGATGAAAATACACACGAGGG  990
      |||| | |||||||| |||||||| |||||||||||||||||||||||||
seq2  GGACCATTTTCGAAAGGTGTTAGTAAAGCAGATGAAAATACACACGAGGG  1000

seq1  CAGCGTTTGGGTC-TGGAAGGTCTGTGTGAGAGGAATGTCAGAAAGACAC  1039
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CAGCGTTTGGGTCTTGGAAGGTCTGTGTGAGAGGAATGTCAGAAAGACAC  1050

seq1  GTGCTTGAGATGACCAAGGTCATCGTAG-TTCCTTAGAGTCTCACCCATT  1088
      |||||||| |||| | |||||||||||| ||| |||||||||| ||||||
seq2  GTGCTTGA-ATGA-CTAGGTCATCGTAGTTTCTTTAGAGTCTC-CCCATT  1097

seq1  TGCTCATGCAGCAGGTTACCTTAGCA--TCTGTGCCCTTTGCCGTTGTGG  1136
      |||||||||||||||||||| |||||   |||||||| ||||||| ||| 
seq2  TGCTCATGCAGCAGGTTACCCTAGCACTCCTGTGCCC-TTGCCGTGGTGA  1146

seq1  ATCTG--CACTTGGCATGC-ATTCGGAAAGACA  1166
      |||||  |||||||||||| | |||| ||||||
seq2  ATCTGGCCACTTGGCATGCAAATCGG-AAGACA  1178