BAC Information

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BAC

Clone NameB6Ng01-206G01
Chromosome12 (Build37)
Map Location 19,181,991 - 19,183,008
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668539, LOC100043324, LOC636282, EG632781, LOC668541, LOC673160, 5730507C01Rik, EG668553, LOC668558, LOC100042641, LOC668568, LOC668570, EG668413
Downstream geneLOC671401, EG546524, EG668584, EG544848, EG627871, LOC100042698, LOC629055, EG668588, LOC100042706, EG668594, EG668600, LOC100042727, LOC673301, EG668605
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-206G01.bB6Ng01-206G01.g
ACCGA025809GA025810
length9531,023
definitionB6Ng01-206G01.b B6Ng01-206G01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggatgcggttagcgagaattttattaaggatttttgc
atcgatgttcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagaataccttctacttctatcttgtgaaaaagtttgtgcagaactgg
agttagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcaacccctgagtttgatta
tttcctgccgtctactcctcttgggtgaatttgccttcttttttctagag
cttttagatgtgtgtcaagcctgctagtatggtgctctctccgatttttt
ctt
tggcagagacccatgaggactacaaggcgcccacggcctctagcttcacc
acgggcacggcccagtgccggaacaccgtggcggccatctagcttagccc
gcgccgggagggaggctagggcctcggggatcgcgctgagccctggggcc
cggctaggcttccgcgcctggtgcccgatatccagtgccctccgcctgcg
cccacacccgggaaaagtttctggtaccccaaagccttacgcagccgggc
cagcagtgcccgacacagaagccctttgttccctgctctagggagaggct
gcttggccaccttggggcttttttgggaacgctcctgtctgttcccattt
ccctcgcagggtttcaggtcctttgttcccatcctcggagaggtcaactt
cggctgcagaatccctggcggctgcgagccggggacccctgcgagctctg
cggtccctgagtgatggctctccctgcgtggacctctccaacttgttcca
gaagtggcccggcgggggcagctgtggcttctgagccaacatgtagagca
gatccaggggaccacaagctgcttaggcaggggtgcccatcccatcttgg
gaggcctggcagtgcccactatttgccacagacagagcagcactgtagag
ggatgtggagaaccagcgctttgaggtccaaaaggtctttggtggccact
tctgggctacctgtgtggtgcctgctgacagtatagtcagctcctttgcc
cttaacctggaaaagggcctgcatagtcattgtattgagtgggctaagca
gcgagctctccagaccctgggggagagggactgcgagaaggaagcagttt
gggttgaaaattgaagcaagcttggaagaggctggtgtgaagtccagaga
caatggcttgtccatagcttggggaagcctcacttacatcatttttcttt
acctccccacagaatttagagtttctgtttttcgctctgtaggcattgtg
cgtccagactgggactcacagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_19181991_19183008
seq2: B6Ng01-206G01.g_70_1092

seq1  TGGCAGAGACCCATGAGGACTACAAGGCGCCCACGGCCTCTAGCTTCACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGAGACCCATGAGGACTACAAGGCGCCCACGGCCTCTAGCTTCACC  50

seq1  ACGGGCACGGCCCAGTGCCGGAACACCGTGGCGGCCATCTAGCTTAGCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGGCACGGCCCAGTGCCGGAACACCGTGGCGGCCATCTAGCTTAGCCC  100

seq1  GCGCCGGGAGGGAGGCTAGGGCCTCGGGGATCGCGCTGAGCCCTGGGGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCCGGGAGGGAGGCTAGGGCCTCGGGGATCGCGCTGAGCCCTGGGGCC  150

seq1  CGGCTAGGCTTCCGCGCCTGGTGCCCGATATCCAGTGCCCTCCGCCTGCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCTAGGCTTCCGCGCCTGGTGCCCGATATCCAGTGCCCTCCGCCTGCG  200

seq1  CCCACACCCGGGAAAAGTTTCTGGTACCCCAAAGCCTTACGCAGCCGGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACACCCGGGAAAAGTTTCTGGTACCCCAAAGCCTTACGCAGCCGGGC  250

seq1  CAGCAGTGCCCGACACAGAAGCCCTTTGTTCCCTGCTCTAGGGAGAGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGTGCCCGACACAGAAGCCCTTTGTTCCCTGCTCTAGGGAGAGGCT  300

seq1  GCTTGGCCACCTTGGGGCTTTTTTGGGAACGCTCCTGTCTGTTCCCATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGCCACCTTGGGGCTTTTTTGGGAACGCTCCTGTCTGTTCCCATTT  350

seq1  CCCTCGCAGGGTTTCAGGTCCTTTGTTCCCATCCTCGGAGAGGTCAACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCGCAGGGTTTCAGGTCCTTTGTTCCCATCCTCGGAGAGGTCAACTT  400

seq1  CGGCTGCAGAATCCCTGGCGGCTGCGAGCCGGGGACCCCTGCGAGCTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCTGCAGAATCCCTGGCGGCTGCGAGCCGGGGACCCCTGCGAGCTCTG  450

seq1  CGGTCCCTGAGTGATGGCTCTCCCTGCGTGGACCTCTCCAACTTGTTCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTCCCTGAGTGATGGCTCTCCCTGCGTGGACCTCTCCAACTTGTTCCA  500

seq1  GAAGTGGCCCGGCGGGGGCAGCTGTGGCTTCTGAGCCAACATGTAGAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGGCCCGGCGGGGGCAGCTGTGGCTTCTGAGCCAACATGTAGAGCA  550

seq1  GATCCAGGGGACCACAAGCTGCTTAGGCAGGGGTGCCCATCCCATCTTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCAGGGGACCACAAGCTGCTTAGGCAGGGGTGCCCATCCCATCTTGG  600

seq1  GAGGCCTGGCAGTGCCCACTATTTGCCACAGACAGAGCAGCACTGTAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCCTGGCAGTGCCCACTATTTGCCACAGACAGAGCAGCACTGTAGAG  650

seq1  GGATGTGGAGAACCAGCGCTTTGAGGTCCAAAAGGTCTTTGGTGGCCACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTGGAGAACCAGCGCTTTGAGGTCCAAAAGGTCTTTGGTGGCCACT  700

seq1  TCTGGGCTACCTGTGTGGTGCCTGCTGACAGTATAGTCAGCTCCTTTGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGCTACCTGTGTGGTGCCTGCTGACAGTATAGTCAGCTCCTTTGCC  750

seq1  CTTAACCTGGAAAAGGGCCTGCATAGTCATTGTATTGAGT-GGCTAAGCA  799
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CTTAACCTGGAAAAGGGCCTGCATAGTCATTGTATTGAGTGGGCTAAGCA  800

seq1  GCGAGCTCTCCAGACCCTGGGGAAGAGGGACTGCGAGAAGGAAGCAGTTT  849
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GCGAGCTCTCCAGACCCTGGGGGAGAGGGACTGCGAGAAGGAAGCAGTTT  850

seq1  GGGTTGAAAATTGAAGCAGGCTTGGAAGAGGCT-GTGTG-AGTCCAGAGA  897
      |||||||||||||||||| |||||||||||||| ||||| ||||||||||
seq2  GGGTTGAAAATTGAAGCAAGCTTGGAAGAGGCTGGTGTGAAGTCCAGAGA  900

seq1  CCATGGC-TGTCCATAGCTTGGGGAAGCCTCACTTACATCA-TTTTCTTT  945
      | ||||| ||||||||||||||||||||||||||||||||| ||||||||
seq2  CAATGGCTTGTCCATAGCTTGGGGAAGCCTCACTTACATCATTTTTCTTT  950

seq1  ACCTCCCCAACAGAATTTAGAGTTTCGTGTTTTCGGCTCTGTAGGCATTG  995
      |||||||| ||||||||||||||||| ||||||  |||||||||||||||
seq2  ACCTCCCC-ACAGAATTTAGAGTTTC-TGTTTTTCGCTCTGTAGGCATTG  998

seq1  TGCGTCCAG-CT-GGACTCACAGTA  1018
      ||||||||| || ||||||||||||
seq2  TGCGTCCAGACTGGGACTCACAGTA  1023