BAC Information

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BAC

Clone NameB6Ng01-208H14
Chromosome12 (Build37)
Map Location 88,224,704 - 88,426,543
singlet/doubletdoublet
Overlap gene6430527G18Rik, 2310044G17Rik, Zdhhc22, Tmem63c
Upstream geneTtll5, Tgfb3, 1700019E19Rik, 1700020O03Rik, LOC100042112, Esrrb, LOC667191, Vash1, Angel1, EG627607, LOC100042650
Downstream geneNgb, Pomt2, Gstz1, EG625237, Tmed8, Gm263, 4933437F05Rik, AI413782, Ahsa1, Thsd3, Sptlc2, LOC667287, Nrp, 1810035L17Rik, Snw1, LOC100042747, EG544883, EG666806, EG633031, Oog1, LOC100042776, LOC100042778, LOC100042239, LOC100042786, BB287469, LOC100038964, LOC673658, LOC100038992, LOC100038982, LOC674027, LOC100039042, LOC100039052, LOC100039076, LOC100039087, LOC100039100, LOC100039191, LOC100039203, LOC627873, LOC100039162, LOC627881, LOC100039129, LOC636517, LOC544884, LOC100039226, LOC432715, EG667350, LOC546543, EG667388, LOC627971, LOC667395, LOC100039315
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-208H14.bB6Ng01-208H14.g
ACCGA027346GA027347
length918251
definitionB6Ng01-208H14.b B6Ng01-208H14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(88,425,637 - 88,426,543)(88,224,704 - 88,224,954)
sequence
gaattctttctggaatgttctgttcccaaaaccataaagggggaaacaat
tataataggaatgggttttagaaatgagtctgctctggctgctgtctttg
tgtagggacctcaattaatcttacctatgttctacatgtgtgttagagaa
aaattcattgtggccctcctctagcctggtcctccaaccagcaatagtga
tggttgcttgtgctccaaccaggtcccagatacagacagagggagcaaga
agaaatgcttccaagaaggcttcctctgcgggctgttgtgctgcttgttg
ttgttgtttgtttgtttgtttctttctctctctctctctctctctctctc
tttgtttctttctttctatacatcattcagaaaggaaaccctttactgct
ataaacaagtagttactatagaaagtcatttggggagatgagtatgaaat
catgaagtgcaaaaattatgttttatccattggaaatcattccagtgtcg
cagcatggatgtttactctgagaaatgctggcacagatactcagcattgc
tggcagggctctgacttggtgtgggatgactcttatctccagagcctgat
gactacactgggtacccctgcaaaaagccagaggactcactaagggtacc
tctaaacagacagccttcagtgccccatagcccagactccattcaccact
atcccgtccccctctctgtttctccctcctccccactctctgagaccttg
caatggtgctttacagtgactggacctgactcatgtggtgggagagattg
gccaaacatcagcctgtttgtttggaagaagtgttggagggtggtcaggt
agtaattgtcttttggatgggcattatgagcccatttgagccctgcaatc
cttgagcttaaggaaaag
ttctatgcggccggcgccgtcgtaattgacgcaaccacggcatacgggtt
cggagaagtcccagatcatggcccagggcatgcgaggcaggtcgcacagg
tagcaagactgtcttcgggacgaggacacctgcgccgccgacatgatgcc
agcctcggggaaggtaggcccccgcccgggctgtttccgaggcgccttct
cctacgggaggactagctggctggggaagaagtccagctgcgggggaggg
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_88425637_88426543
seq2: B6Ng01-208H14.b_49_966 (reverse)

seq1  CTTTTCCTT-AGCTCAAGGTTTGC-GGGCTC-AATGGGCTCAT-ATG-CC  45
      ||||||||| ||||||||| |||| |||||| ||||||||||| ||| ||
seq2  CTTTTCCTTAAGCTCAAGGATTGCAGGGCTCAAATGGGCTCATAATGCCC  50

seq1  ATCC-AAAGAC-ACTGCTCCCTG-CCACCCTCCAACACTTCTTCCAAAC-  91
      |||| |||||| | | || |||| ||||||||||||||||||||||||| 
seq2  ATCCAAAAGACAATTACTACCTGACCACCCTCCAACACTTCTTCCAAACA  100

seq1  AACAGGCTGATG-TTGGCCAATCTCTCCCACCACATGAGTCAGGTCCAGT  140
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AACAGGCTGATGTTTGGCCAATCTCTCCCACCACATGAGTCAGGTCCAGT  150

seq1  CACTGT-AAGCACCATTGCAAGGTCTCAGAGAGTGGGGAGGAGGGAGAAA  189
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTAAAGCACCATTGCAAGGTCTCAGAGAGTGGGGAGGAGGGAGAAA  200

seq1  CAGAGAGGGGGACGGGATAGTGGTGAATGGAGTCTGGGCTATGGGGCACT  239
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGGGGGACGGGATAGTGGTGAATGGAGTCTGGGCTATGGGGCACT  250

seq1  GAAGGCTGTCTGTTTAGAGGTACCCTTAGTGAGTCCTCTGGCTTTTTGCA  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCTGTCTGTTTAGAGGTACCCTTAGTGAGTCCTCTGGCTTTTTGCA  300

seq1  GGGGTACCCAGTGTAGTCATCAGGCTCTGGAGATAAGAGTCATCCCACAC  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTACCCAGTGTAGTCATCAGGCTCTGGAGATAAGAGTCATCCCACAC  350

seq1  CAAGTCAGAGCCCTGCCAGCAATGCTGAGTATCTGTGCCAGCATTTCTCA  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCAGAGCCCTGCCAGCAATGCTGAGTATCTGTGCCAGCATTTCTCA  400

seq1  GAGTAAACATCCATGCTGCGACACTGGAATGATTTCCAATGGATAAAACA  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAAACATCCATGCTGCGACACTGGAATGATTTCCAATGGATAAAACA  450

seq1  TAATTTTTGCACTTCATGATTTCATACTCATCTCCCCAAATGACTTTCTA  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTTGCACTTCATGATTTCATACTCATCTCCCCAAATGACTTTCTA  500

seq1  TAGTAACTACTTGTTTATAGCAGTAAAGGGTTTCCTTTCTGAATGATGTA  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAACTACTTGTTTATAGCAGTAAAGGGTTTCCTTTCTGAATGATGTA  550

seq1  TAGAAAGAAAGAAACAAAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAA  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAGAAAGAAACAAAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAA  600

seq1  CAAACAAACAAACAACAACAACAAGCAGCACAACAGCCCGCAGAGGAAGC  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAACAAACAACAACAACAAGCAGCACAACAGCCCGCAGAGGAAGC  650

seq1  CTTCTTGGAAGCATTTCTTCTTGCTCCCTCTGTCTGTATCTGGGACCTGG  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTGGAAGCATTTCTTCTTGCTCCCTCTGTCTGTATCTGGGACCTGG  700

seq1  TTGGAGCACAAGCAACCATCACTATTGCTGGTTGGAGGACCAGGCTAGAG  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGCACAAGCAACCATCACTATTGCTGGTTGGAGGACCAGGCTAGAG  750

seq1  GAGGGCCACAATGAATTTTTCTCTAACACACATGTAGAACATAGGTAAGA  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCCACAATGAATTTTTCTCTAACACACATGTAGAACATAGGTAAGA  800

seq1  TTAATTGAGGTCCCTACACAAAGACAGCAGCCAGAGCAGACTCATTTCTA  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTGAGGTCCCTACACAAAGACAGCAGCCAGAGCAGACTCATTTCTA  850

seq1  AAACCCATTCCTATTATAATTGTTTCCCCCTTTATGGTTTTGGGAACAGA  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCATTCCTATTATAATTGTTTCCCCCTTTATGGTTTTGGGAACAGA  900

seq1  ACATTCCAGAAAGAATTC  907
      ||||||||||||||||||
seq2  ACATTCCAGAAAGAATTC  918

seq1: chr12_88224704_88224954
seq2: B6Ng01-208H14.g_63_313

seq1  TTCTATGCGGTCGGCGCCTTCGTAATTGACGCAACCACGGCATACGGGTT  50
      |||||||||| ||||||| |||||||||||||||||||||||||||||||
seq2  TTCTATGCGGCCGGCGCCGTCGTAATTGACGCAACCACGGCATACGGGTT  50

seq1  CGGAGAAGTCCCAGATCATGGCCCAGGGCATGCGAGGCAGGTCGCACAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAGAAGTCCCAGATCATGGCCCAGGGCATGCGAGGCAGGTCGCACAGG  100

seq1  TAGCAAGACTGTCTTCGGGACGAGGACACCTGCGCCGCCGACATGATGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAGACTGTCTTCGGGACGAGGACACCTGCGCCGCCGACATGATGCC  150

seq1  AGCCTCGGGGAAGGTAGGCCCCCGCCCGGGCTGTTTCCGAGGCGCCTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCGGGGAAGGTAGGCCCCCGCCCGGGCTGTTTCCGAGGCGCCTTCT  200

seq1  CCTACGGGAGGACTAGCTGGCTGGGGAAGAAGTCCAGCTGCGGGGGAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACGGGAGGACTAGCTGGCTGGGGAAGAAGTCCAGCTGCGGGGGAGGG  250

seq1  G  251
      |
seq2  G  251