BAC Information

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BAC

Clone NameB6Ng01-210L18
Chromosome12 (Build37)
Map Location 26,028,744 - 26,029,948
singlet/doubletsinglet
Overlap genenone
Upstream geneEG668711, EG668714, LOC629364, Taf1b, Grhl1, EG629383, Klf11, Cys1, Rrm2, LOC668719, Mboat2, EG629397, C330002I19Rik, Id2
Downstream geneLOC100042973, LOC100042974, LOC668726, Rnf144
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-210L18.bB6Ng01-210L18.g
ACCGA028996GA028997
length1,1751,180
definitionB6Ng01-210L18.b B6Ng01-210L18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttatcaaagtaaacagaaagggggctggagagatggttcaatgg
ttaagagcagtggatgcttttccagagtgcctaggttcaagtcccagcac
ctatatgggggctcacgacacctttcactccagttccatggatctgaagt
ccttttctaatctttgtgggcaccatgcctagcacatggtacacacacac
acacacacacacacacacacacacacacacacacacaggcatacacgcac
caaatgttcatacacataagagtataaatataaaaattaatttcaaacaa
agcaagcactgagtcagaatgatgcacaggcaaatgaaagggtcactttt
gttttaaaaatgtttccagacagtttggacacttctagaagtgtgacctg
cgctccaagtctcagatggagggcacccccgccataaatatttagcattt
cttgacaacacgaggctctattttaaaggcttccgggctcactgtgcctc
atgtcagcaaacgttagctgtaggctttacctttccgagaagggttctgc
agcaggccttcagcgagctcgcacacctacacgtcacagatggctttgct
ttagcggagatgaaactgcatttggtggaactgattaaatataaaaacac
caccatctgccatttattctaatatgaaatggtttgggcagatgctgaca
tctctcgccatgattgattcatccctgacaagggaagatgcgccgcgggt
tccagctgcccacttctcaagccgcggtgcttcccagagccagtgccagc
cccggcagtttgatttggacatagcaggtgaaccgagaactttcctaatg
agaagcctccaagcacttccgccgtctttcccctcccctcacttctggcc
tgaattgaactgggagaatattttacaccgggctaccggctatcagtggt
gctatgccttccttgggatgactaaaggagtacagttgtggaaatagtga
atgtattcacattttgttctgaaacattcctgacgcctacaccataggct
gctgctggttaaatatttaaaattaattttctagtgacagaggttcactc
caaagcctatgatactgaagcccaggcatgtaccatggctgaaacgctgc
gtccatatgctgaacatccaatggg
gaattctttccaccctgaaattccgagcaaggcaaaaatgcccactctcc
ctgattccatgggaagttctagatgatgtgataaggcaagataaagaatc
aagaaaatatacatcagaaaggaagacgtaaaactgtcctcgtcttcata
cctcatcaccacctgatagaaatcccagggaatctcccccatcaaaatag
gttctaaactcagaacacttggcaaggtgtaagatgatctaagataaata
tttcaaagataaatgtatatctgaatactgtgagctgtgagattacaaat
acaatagtatttttagccactcaaaaactaatagatacctaagtgtagat
ttaacaaaacaggaaagatgattggctaaaaaccatatgcactgatacaa
gaaatcaagaaatatgtcaattaataaaaagagacacaatgagatatgat
cgttaatggagaaaaaaatgtgctggttaggttttggatttttttttttt
ttttgctttttgttttcaggagttttgtttggttttgttttcgttttgtt
ttgtttttttccaacttgacacaaggtagagtcatttgggacaagggagt
ctcaactgagaaaatgcctcagtacttcaaaccggcctgtagactcgcct
gtgaagcattttcttgtctaatgactgacgtgggagggctcatcctactt
gagatagcccaaggtcctgggtgacagaaaagcagctgagcaagccatga
taagcaagtataagtatgcagtgctgctctaggctctctgcttttgttct
tgcctccatgttcctgccctgtgtgagttcctgtcttggcttccctgcag
gatggactgggatccagacatctaagccaaatcaccctttcctctcccgt
tgcctttgggtcacggtcttttatcacagcagcagtaggatgcacttcat
ctccatgggaataagaaggcagccagagtattgattctcaagtcctcaat
tgatgagcatgctcaccttataattgctatttttcatacatatgagagga
tggcttaggatcacatgaaacttacaagaaatccatgtttacatgtattt
tgaaatactcacgtggagatcgtcggtaattgcacttcttagttatggga
gtgctatggtctacgcgtatattaggcaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_26028744_26029948
seq2: B6Ng01-210L18.b_46_1220

seq1  GAATTCTTATCAAAGTAAACAGAAAGGGGGCTGGAGAGATGGTTCAATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATCAAAGTAAACAGAAAGGGGGCTGGAGAGATGGTTCAATGG  50

seq1  TTAAGAGCAGTGGATGCTTTTCCAGAGTGCCTAGGTTCAAGTCCCAGCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAGCAGTGGATGCTTTTCCAGAGTGCCTAGGTTCAAGTCCCAGCAC  100

seq1  CTATATGGGGGCTCACGACACCTTTCACTCCAGTTCCATGGATCTGAAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATGGGGGCTCACGACACCTTTCACTCCAGTTCCATGGATCTGAAGT  150

seq1  CCTTTTCTAATCTTTGTGGGCACCATGCCTAGCACATGGTACACACACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTCTAATCTTTGTGGGCACCATGCCTAGCACATGGTACACACACAC  200

seq1  ACACACACACACACACACACACACACACACACACACAGGCATACACGCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACACACAGGCATACACGCAC  250

seq1  CAAATGTTCATACACATAAGAGTATAAATATAAAAATTAATTTCAAACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGTTCATACACATAAGAGTATAAATATAAAAATTAATTTCAAACAA  300

seq1  AGCAAGCACTGAGTCAGAATGATGCACAGGCAAATGAAAGGGTCACTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGCACTGAGTCAGAATGATGCACAGGCAAATGAAAGGGTCACTTTT  350

seq1  GTTTTAAAAATGTTTCCAGACAGTTTGGACACTTCTAGAAGTGTGACCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAAAAATGTTTCCAGACAGTTTGGACACTTCTAGAAGTGTGACCTG  400

seq1  CGCTCCAAGTCTCAGATGGAGGGCACCCCCGCCATAAATATTTAGCATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTCCAAGTCTCAGATGGAGGGCACCCCCGCCATAAATATTTAGCATTT  450

seq1  CTTGACAACACGAGGCTCTATTTTAAAGGCTTCCGGGCTCACTGTGCCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGACAACACGAGGCTCTATTTTAAAGGCTTCCGGGCTCACTGTGCCTC  500

seq1  ATGTCAGCAAACGTTAGCTGTAGGCTTTACCTTTCCGAGAAGGGTTCTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCAGCAAACGTTAGCTGTAGGCTTTACCTTTCCGAGAAGGGTTCTGC  550

seq1  AGCAGGCCTTCAGCGAGCTCGCACACCTACACGTCACAGATGGCTTTGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGCCTTCAGCGAGCTCGCACACCTACACGTCACAGATGGCTTTGCT  600

seq1  TTAGCGGAGATGAAACTGCATTTGGTGGAACTGATTAAATATAAAAACAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCGGAGATGAAACTGCATTTGGTGGAACTGATTAAATATAAAAACAC  650

seq1  CACCATCTGCCATTTATTCTAATATGAAATGGTTTGGGCAGATGCTGACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATCTGCCATTTATTCTAATATGAAATGGTTTGGGCAGATGCTGACA  700

seq1  TCTCTCGCCATGATTGATTCATCCCTGACAAGGGAAGATGCGCCGCGGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCGCCATGATTGATTCATCCCTGACAAGGGAAGATGCGCCGCGGGT  750

seq1  TCCAGCTGCCCACTTCTCAAGCCGCGGTGCTTCCCAGAGCCAGTGCCAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCTGCCCACTTCTCAAGCCGCGGTGCTTCCCAGAGCCAGTGCCAGC  800

seq1  CCCGGCAGTTTGATTTGGACATAGCAGGTGAACCGAGAACTTTCCTAATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGGCAGTTTGATTTGGACATAGCAGGTGAACCGAGAACTTTCCTAATG  850

seq1  AGAAGCCTCCAAGCACTTCCGCCGTCTTTTCCCCTCCCCTCACTTCTGGC  900
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AGAAGCCTCCAAGCACTTCCGCCGTC-TTTCCCCTCCCCTCACTTCTGGC  899

seq1  CTGAATTGAACTGGGAGAATATTTTACACCGGGCTACCGGCTATCAAGTG  950
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CTGAATTGAACTGGGAGAATATTTTACACCGGGCTACCGGCTATC-AGTG  948

seq1  GTTGCTATGCCTTCCTTGGGATGACTAAAGAAGTACAGTTGTTGGAAAAT  1000
      | |||||||||||||||||||||||||||| |||||||||||  | ||||
seq2  G-TGCTATGCCTTCCTTGGGATGACTAAAGGAGTACAGTTGT--GGAAAT  995

seq1  AGTGAATGTATTCACATTTTGGTCTTGAAAACATTCTTGACGCCTTACA-  1049
      ||||||||||||||||||||| |||   |||||||| ||||||| |||| 
seq2  AGTGAATGTATTCACATTTTGTTCT--GAAACATTCCTGACGCC-TACAC  1042

seq1  CATAGGCTGCTGCTGGGTTTAAATTATTTTAAAATTATTTTTTCTAAGTG  1099
      ||||||||||||||||  ||||||   ||||||||||  |||||| ||| 
seq2  CATAGGCTGCTGCTGG--TTAAAT--ATTTAAAATTA-ATTTTCT-AGT-  1085

seq1  GACAAGAGGGTTTCATTTCAAAAGCTATTGTTTACTGAGAAGCCACAGCA  1149
      ||| |||||  |||| | ||||  ||||    ||||  |||||| |||  
seq2  GAC-AGAGG--TTCACTCCAAAGCCTAT--GATACT--GAAGCC-CAG-G  1126

seq1  CATGTTACCCACTGGCTGAGAAACAGCTGCGTCCATATTGCTTAAACATC  1199
      |||| ||||   |||||  ||||| |||||||||||| ||| | ||||||
seq2  CATG-TACC--ATGGCT--GAAAC-GCTGCGTCCATA-TGC-TGAACATC  1168

seq1  C-ATGGG  1205
      | |||||
seq2  CAATGGG  1175