BAC Information

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BAC

Clone NameB6Ng01-214N04
Chromosome12 (Build37)
Map Location 18,998,561 - 18,999,262
singlet/doubletsinglet
Overlap geneLOC668570
Upstream geneLOC673341, EG245297, LOC100042573, LOC668539, LOC100043324, LOC636282, EG632781, LOC668541, LOC673160, 5730507C01Rik, EG668553, LOC668558, LOC100042641, LOC668568
Downstream geneEG668413, LOC671401, EG546524, EG668584, EG544848, EG627871, LOC100042698, LOC629055, EG668588, LOC100042706, EG668594, EG668600
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-214N04.bB6Ng01-214N04.g
ACCGA031967GA031968
length545702
definitionB6Ng01-214N04.b B6Ng01-214N04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
caagcccatggtcagctcaaggacgttctaggacattggaacactggtga
aggcttagctatgtcagaattcaatcttaaaaggcacttatattaagata
atactaaaagagagcacgtgtatccatacaccagactaactcgggaatag
ggtatgagtatatgggttaatgagaatgccaaaactccaggaggtgagct
tccatgatactctttgcctcgtgagtgcttccaagcctcttggcctgcca
agcagacttcaccggagtgtgcgtggcaggacggaggcccacaacatata
tgtagtggatatgctgctcagccttcatggggtccccaacatccagagcg
ggacatgtcccttaagctgtttctgtctgtgcaaactgcttccctaactg
ggatgcattgtctgacctcagtgggaaaggacatgcctaactctgcagag
tcttgacatgccatagttgggggtggttcccagcctccctggggagataa
aagggagtcagtgatgagggactgtggaaggtggaatgggatggg
gaattccatgtgagatcatctctcccaaataaataattacatacatccat
aaaataagtagttatatacagtgactaagacaatggctatagatgttaat
aataatttgtattatttgggaaataacaagaaactgtctgtgtatctcca
gtttcattttctagaccatttcccacctggagttttttggatctgcagat
tcaggacccatgggtgggcagggctcaatgtatttcccctttgaccttcc
ctccaggatttcccagctccccaccaaagatcttcctttcagacagacgc
tttgacccacaacctcccctctaatctgaaccaaggagccctccattctt
ccacaccccaactgtatcctgtgctcttgaacgtcacttaaactttcctg
gctccctttgcccagcaccttgtctgtgagacttgttgtgatgagagaag
ggtcctgactcagccctgtccatgctccttggttagcagagcgagaacca
taacccaccctccatcctccagagcacactcacagatgcccgtttgcagg
ccatctacaagatggtgccctccgtgatgaggatgcccggggacaagtcc
atgcctgagaagcgaacagacaaggtcttcagacagatggacacaaagaa
agatggtaggaaacatggcaggagtgagcaggtagggatggaggagggga
tt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_18998561_18999262
seq2: B6Ng01-214N04.g_70_771

seq1  GAATTCCATGTGAGATCATCTCTCCCAAATAAATAATTACATACATCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGTGAGATCATCTCTCCCAAATAAATAATTACATACATCCAT  50

seq1  AAAATAAGTAGTTATATACAGTGACTAAGACAATGGCTATAGATGTTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAGTAGTTATATACAGTGACTAAGACAATGGCTATAGATGTTAAT  100

seq1  AATAATTTGTATTATTTGGGAAATAACAAGAAACTGTCTGTGTATCTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTTGTATTATTTGGGAAATAACAAGAAACTGTCTGTGTATCTCCA  150

seq1  GTTTCATTTTCTAGACCATTTCCCACCTGGAGTTTTTTGGATCTGCAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCATTTTCTAGACCATTTCCCACCTGGAGTTTTTTGGATCTGCAGAT  200

seq1  TCAGGACCCATGGGTGGGCAGGGCTCAATGTATTTCCCCTTTGACCTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGACCCATGGGTGGGCAGGGCTCAATGTATTTCCCCTTTGACCTTCC  250

seq1  CTCCAGGATTTCCCAGCTCCCCACCAAAGATCTTCCTTTCAGACAGACGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGGATTTCCCAGCTCCCCACCAAAGATCTTCCTTTCAGACAGACGC  300

seq1  TTTGACCCACAACCTCCCCTCTAATCTGAACCAAGGAGCCCTCCATTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACCCACAACCTCCCCTCTAATCTGAACCAAGGAGCCCTCCATTCTT  350

seq1  CCACACCCCAACTGTATCCTGTGCTCTTGAACGTCACTTAAACTTTCCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACCCCAACTGTATCCTGTGCTCTTGAACGTCACTTAAACTTTCCTG  400

seq1  GCTCCCTTTGCCCAGCACCTTGTCTGTGAGACTTGTTGTGATGAGAGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCTTTGCCCAGCACCTTGTCTGTGAGACTTGTTGTGATGAGAGAAG  450

seq1  GGTCCTGACTCAGCCCTGTCCATGCTCCTTGGTTAGCAGAGCGAGAACCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTGACTCAGCCCTGTCCATGCTCCTTGGTTAGCAGAGCGAGAACCA  500

seq1  TAACCCACCCTCCATCCTCCAGAGCACACTCACAGATGCCCGTTTGCAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCCACCCTCCATCCTCCAGAGCACACTCACAGATGCCCGTTTGCAGG  550

seq1  CCATCTACAAGATGGTGCCCTCCGTGATGAGGATGCCCGGGGACAAGTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTACAAGATGGTGCCCTCCGTGATGAGGATGCCCGGGGACAAGTCC  600

seq1  ATGCCTGAGAAGCGAACAGACAAGGTCTTCAGACAGATGGACACAAAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTGAGAAGCGAACAGACAAGGTCTTCAGACAGATGGACACAAAGAA  650

seq1  AGATGGTAGGAAACATGGCAGGAGTGAGCAGGTAGGGATGGAGGAGGGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGTAGGAAACATGGCAGGAGTGAGCAGGTAGGGATGGAGGAGGGGA  700

seq1  TT  702
      ||
seq2  TT  702