BAC Information

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BAC

Clone NameB6Ng01-215F15
Chromosome12 (Build37)
Map Location 38,728,626 - 38,729,766
singlet/doubletsinglet
Overlap geneDgkb
Upstream geneMeox2, A530016O06Rik, LOC100043139
Downstream geneLOC668824, LOC100043142, Etv1, LOC100043145
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-215F15.bB6Ng01-215F15.g
ACCGA032344GA032345
length1,2041,134
definitionB6Ng01-215F15.b B6Ng01-215F15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaccagcctttcaaaaaaatacctaataccaatactcctcaaac
taccacacaatatagaaatagaagcaagtctatcaagctcattctatgag
gctacagttatgtcgatacctaaatcacagtctctttctcaaagaaagag
aacttcagaccaatttcccttataaacattgaagcaaaaatcctcaacaa
aatactcagaatctgagccaagaacacataaaagaaagtcaacccacatg
aacaagtaatcttttttccaaggatgcgagagtggctcaatatatgaaaa
tctatcaacctaatccactcttgaaacaaactgaaagaaaaatagaataa
cataatcatcccattatatactgaaaaattcttttacaaaatccaacacc
acttcatattataagttttggagagatcaaggataccaggtacatactta
aatataataaaagcaatatacaaccacccaacattaaatttattggggag
aaatttaaagcaatctcagggacaagacaagggctcccattctctacaaa
tatattcaccatagtatttgaaattctagttagaacaactagaggagata
aatgaacaaatattgaaagggagaattcaaagtatcactattcaaagatg
atattttagtatacattagtacccgaaaaattctaccagagaactcctac
atctgataaataccttcagcaaagtagctagatagaaaatcaacttacaa
aaatcattgccttcctttacacaaacaatatatgggctaagaaagaaatt
gtggaaacagcatcctttatagtcaccacaaatattattgtatatctttc
tggatctctaaccaagcaaataaaagacttatattacaggaattgacatt
cctctgaaaaaaagagattgaggaagatatcaaaagatgtaaacatctcc
caagctcttagatcagtagaattaacatagtgaaatgaacatctacagat
tcaatgcaattccattaaaattccaacacatttttacagacattgaagag
cattttccacttcatatgaataaacaaaaaacccaggttagtaaacatct
tgtcaataaagacttctgaagtatcatcatcctgacttcagatttactcg
ataatatggtaaccctgtagattagcttaggaacgaacgtgaatggacta
catt
gaattcctctgtagaaggacctctgggttgtgtgcagctttttgctatta
tgaataaggctcctatggacatagaggaccatgtgctttattgattgttc
tgaaaggttttattggcttctagcccctggtctccttatttctcctcatc
atcattctataggcattattaacttgagaattgtttggttaatggaaaat
tgacatgttactcatccatttatatttctggcttctgtagataataactc
ctaaaaccaagaagcctacagttttaatagtctattctccggagcgattt
tatatgcaaggttcaaattatttgacatacatgacaaaacttctcactgg
caactctctactttctttcttttaggctcttgattttattttttcctcct
acatctagaataggatattctccaatttcctcttaagtttctccctacga
actcaagactccttcctagattataatctatagaaaacttcacattcatt
tcctgactgatcatctgttccaaggttttaaatagcatgcatatatgtgg
caatgtctccaaaatttagtttccgaagtcaatcttctctcaattgatga
cctaactgtccagctgtctagttgacagctcaatttaatggctcattgga
ttttcatatttaactacttaaaaattgaattgtttattccttttctgcag
tatgaacacaaaataacatttaaagcacatctcaagttatattaatatca
tcttttgaattttcactgttatctttccatttttaagaagaaaggttatt
cctcaaaactgacaatttataagtctcccttttcacactgtggagacgtt
aactcccaaaatctcagtttctctgaattatacaattttctctgaaaaac
cacttatcaccatctcacagtgatgataagggtaccctctttcatgactg
tcctctgtatcccatgtactctcttggaacacaccagattccaagatgct
agacaatttatagaaacgtaaatccactatgtcatcctcctacataactc
ttatagtttcacgaatatgtaaagaaaggcatttcatcttaaaagaaaga
aatatgtctttctctagcgactcatgtacttctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_38728626_38729766
seq2: B6Ng01-215F15.g_68_1201

seq1  GAATTCCTCTGTAGAAGGACCTCTGGGTTGTGTGCAGCTTTTTGCTATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTGTAGAAGGACCTCTGGGTTGTGTGCAGCTTTTTGCTATTA  50

seq1  TGAATAAGGCTCCTATGGACATAGAGGACCATGTGCTTTATTGATTGTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAAGGCTCCTATGGACATAGAGGACCATGTGCTTTATTGATTGTTC  100

seq1  TGAAAGGTTTTATTGGCTTCTAGCCCCTGGTCTCCTTATTTCTCCTCATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGGTTTTATTGGCTTCTAGCCCCTGGTCTCCTTATTTCTCCTCATC  150

seq1  ATCATTCTATAGGCATTATTAACTTGAGAATTGTTTGGTTAATGGAAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTCTATAGGCATTATTAACTTGAGAATTGTTTGGTTAATGGAAAAT  200

seq1  TGACATGTTACTCATCCATTTATATTTCTGGCTTCTGTAGATAATAACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATGTTACTCATCCATTTATATTTCTGGCTTCTGTAGATAATAACTC  250

seq1  CTAAAACCAAGAAGCCTACAGTTTTAATAGTCTATTCTCCGGAGCGATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAACCAAGAAGCCTACAGTTTTAATAGTCTATTCTCCGGAGCGATTT  300

seq1  TATATGCAAGGTTCAAATTATTTGACATACATGACAAAACTTCTCACTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGCAAGGTTCAAATTATTTGACATACATGACAAAACTTCTCACTGG  350

seq1  CAACTCTCTACTTTCTTTCTTTTAGGCTCTTGATTTTATTTTTTCCTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCTCTACTTTCTTTCTTTTAGGCTCTTGATTTTATTTTTTCCTCCT  400

seq1  ACATCTAGAATAGGATATTCTCCAATTTCCTCTTAAGTTTCTCCCTACGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTAGAATAGGATATTCTCCAATTTCCTCTTAAGTTTCTCCCTACGA  450

seq1  ACTCAAGACTCCTTCCTAGATTATAATCTATAGAAAACTTCACATTCATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAGACTCCTTCCTAGATTATAATCTATAGAAAACTTCACATTCATT  500

seq1  TCCTGACTGATCATCTGTTCCAAGGTTTTAAATAGCATGCATATATGTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGACTGATCATCTGTTCCAAGGTTTTAAATAGCATGCATATATGTGG  550

seq1  CAATGTCTCCAAAATTTAGTTTCCGAAGTCAATCTTCTCTCAATTGATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTCTCCAAAATTTAGTTTCCGAAGTCAATCTTCTCTCAATTGATGA  600

seq1  CCTAACTGTCCAGCTGTCTAGTTGACAGCTCAATTTAATGGCTCATTGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAACTGTCCAGCTGTCTAGTTGACAGCTCAATTTAATGGCTCATTGGA  650

seq1  TTTTCATATTTAACTACTTAAAAATTGAATTGTTTATTCCTTTTCTGCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATATTTAACTACTTAAAAATTGAATTGTTTATTCCTTTTCTGCAG  700

seq1  TATGAACACAAAATAACATTTAAAGCACATCTCAAGTTATATTAATATCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAACACAAAATAACATTTAAAGCACATCTCAAGTTATATTAATATCA  750

seq1  TCTTTTGAATTTTCACTGTTATCTTTCCATTTTTAAGAAGAAAGGTTATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGAATTTTCACTGTTATCTTTCCATTTTTAAGAAGAAAGGTTATT  800

seq1  CCTCAAAACTGACAATTTATAAGTCTCCCTTTTCACACTGTGGAGACGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAAAACTGACAATTTATAAGTCTCCCTTTTCACACTGTGGAGACGTT  850

seq1  AACTCCCAAAATCTCAGTTTCTCTGAATTATACAATTTTCTCTGAAAAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCCAAAATCTCAGTTTCTCTGAATTATACAATTTTCTCTGAAAAAC  900

seq1  CACTTATCACCATCTCACAGTGATGATAAGGGTACCCTCTTTCATGACTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTATCACCATCTCACAGTGATGATAAGGGTACCCTCTTTCATGACTG  950

seq1  TCCTCTGTATCCCATGTACTCTCTTGAAACACACCAGATTCCAAGATGCT  1000
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TCCTCTGTATCCCATGTACTCTCTTGGAACACACCAGATTCCAAGATGCT  1000

seq1  AGACAATTTATTAGAAACGTTAAATCCAACTATGTCATTCTCCTACATAA  1050
      |||||||||| |||||||| ||||||| |||||||||| |||||||||||
seq2  AGACAATTTA-TAGAAACG-TAAATCC-ACTATGTCATCCTCCTACATAA  1047

seq1  CTCTATAAGGTTTCACG-ATATGTAAAGAAAGGGCATTTCATCCTAAAAG  1099
      |||| ||  |||||||| ||||||||||||| ||||||||||| ||||||
seq2  CTCT-TATAGTTTCACGAATATGTAAAGAAA-GGCATTTCATCTTAAAAG  1095

seq1  AAAAGAATATGTCTTCTTCTAAGCGACTCATGTTGCCTTCTC  1141
      |||  ||||||||||  ||| ||||||||||||   ||||||
seq2  AAAGAAATATGTCTTTCTCT-AGCGACTCATGT--ACTTCTC  1134