BAC Information

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BAC

Clone NameB6Ng01-216M19
Chromosome12 (Build37)
Map Location 37,768,146 - 37,768,916
singlet/doubletsinglet
Overlap genenone
Upstream geneTspan13, EG432649, Bzw2, Ankmy2, 1700108M19Rik, Sostdc1, 4930579E17Rik, LOC638858
Downstream geneMeox2, A530016O06Rik, LOC100043139, Dgkb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-216M19.bB6Ng01-216M19.g
ACCGA033393GA033394
length1,0181,068
definitionB6Ng01-216M19.b B6Ng01-216M19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaggacagattatcaaacagggcaaaaacctggaggtagggattg
atacagaagccatgagggaggtgctacttactgctttgctccctcatgac
ttactaatcctgctccttgttagaacacaggaccacacacccagggatgc
cttcactcacagtgggataggccatcaactatcaggtactaaataagaaa
atttcctccaggattgtctatagcatgaaatcatggatgcatttttaaat
tgtagttctctccacacagatgagctcatgtcaaattgacataaaactat
ccagcacaatcgaccccttatcaacttgacacacaaacatatcattatta
agccatatggcagttttaatagatttggttctcatagattcatgtgtttt
aatacctggccataaggagtggctttgttagaaggcatggccttatcaga
gtagatatggccatgttggaagatgtgcatctctgcttaagtgggctttg
aatttttcctatcctcatgctccacccagtgtggaatcagagacccctcc
tggtttcctgcaggagacagtctccttctggctgcctttggatcaagatg
taaaactctcagcacctttttcagcaacaagtctgcctgcaggctgcatg
cttcctgccatgacaataatggatgcaacctctgaaaatgaaaatgtcaa
tgtctttaaaatatccatctctttaagaatccaaaatctcttaactcatg
aaacactacagaaatctgaatattttatttggggataaaatgttaagaaa
tttttttgagtattcatttagaaaataactatctcactctgcttccaata
ttggcttaaaacttaaaattgactgtcagctctcagagactgaagatttc
aagtgtagttctaggccagcctggtctacaaagtgagttccaggacagca
gagagaaccctgtctcaaaaagaaagatttcaagtgtgaccactagatct
agataccacaatccttgt
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccagggaaggagttacagaaacaaagtttggagctgagatga
aaggatgggaccatgtagagactgccatatccagggatccaccccataat
cagcatccaaacgctgacaccattgcatatactagcaagattttatcgaa
aggacccagatgtagctgtctcttgtgagaactatgccggggcctagcaa
acacagaagtggatgctcacagtcagctaatggatggatcacaggtctcc
caatggaggagctagagaaagtacccaaggagctaaagggatcttcaacc
tatagtgaacaacattatgaacttaaccagtaccctgagctctttgactc
tagctgcatatttgtatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_37768146_37768916
seq2: B6Ng01-216M19.b_296_1064

seq1  TTGTAGTTCTCTCCACACAGATGAGCTCATGTCAAATTGACATAAAACTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGTTCTCTCCACACAGATGAGCTCATGTCAAATTGACATAAAACTA  50

seq1  TCCAGCACAATCGACCCCTTATCAACTTGACACACAAACATATCATTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCACAATCGACCCCTTATCAACTTGACACACAAACATATCATTATT  100

seq1  AAGCCATATGGCAGTTTTAATAGATTTGGTTCTCATAGATTCATGTGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCATATGGCAGTTTTAATAGATTTGGTTCTCATAGATTCATGTGTTT  150

seq1  TAATACCTGGCCATAAGGAGTGGCTTTGTTAGAAGGCATGGCCTTATCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACCTGGCCATAAGGAGTGGCTTTGTTAGAAGGCATGGCCTTATCAG  200

seq1  AGTAGATATGGCCATGTTGGAAGATGTGCATCTCTGCTTAAGTGGGCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGATATGGCCATGTTGGAAGATGTGCATCTCTGCTTAAGTGGGCTTT  250

seq1  GAATTTTTCCTATCCTCATGCTCCACCCAGTGTGGAATCAGAGACCCCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTTCCTATCCTCATGCTCCACCCAGTGTGGAATCAGAGACCCCTC  300

seq1  CTGGTTTCCTGCAGGAGACAGTCTCCTTCTGGCTGCCTTTGGATCAAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTTCCTGCAGGAGACAGTCTCCTTCTGGCTGCCTTTGGATCAAGAT  350

seq1  GTAAAACTCTCAGCACCTTTTTCAGCAACAAGTCTGCCTGCAGGCTGCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAACTCTCAGCACCTTTTTCAGCAACAAGTCTGCCTGCAGGCTGCAT  400

seq1  GCTTCCTGCCATGACAATAATGGATGCAACCTCTGAAAATGAAAATGTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCTGCCATGACAATAATGGATGCAACCTCTGAAAATGAAAATGTCA  450

seq1  ATGTCTTTAAAATATCCATCTCTTTAAGAATCCAAAATCTCTTAACTCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTTTAAAATATCCATCTCTTTAAGAATCCAAAATCTCTTAACTCAT  500

seq1  GAAACACTACAGAAATCTGAATATTTTATTTGGGGATAAAATGTTAAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACACTACAGAAATCTGAATATTTTATTTGGGGATAAAATGTTAAGAA  550

seq1  ATTTTTTTGAGTATTCATTTAGAAAATAACTATCTCACTCTGCTTCCAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTGAGTATTCATTTAGAAAATAACTATCTCACTCTGCTTCCAAT  600

seq1  ATTGGCTTAAAACTTAAAATTGACTGTCAGCTCTCAGAGACTGAAGATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCTTAAAACTTAAAATTGACTGTCAGCTCTCAGAGACTGAAGATTT  650

seq1  CAAGTGTAGTTCTAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGTAGTTCTAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGC  700

seq1  AGAGAGAAACCCTGTCTCAAAAAGAAAGATTTCAAGTGTGAACCACTAGA  750
      |||||| ||||||||||||||||||||||||||||||||| |||||||||
seq2  AGAGAG-AACCCTGTCTCAAAAAGAAAGATTTCAAGTGTG-ACCACTAGA  748

seq1  TCTAGATACCACAATCCTTGT  771
      |||||||||||||||||||||
seq2  TCTAGATACCACAATCCTTGT  769