BAC Information

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BAC

Clone NameB6Ng01-218B18
Chromosome12 (Build37)
Map Location 19,742,351 - 19,743,236
singlet/doubletsinglet
Overlap geneLOC100042706
Upstream geneLOC668558, LOC100042641, LOC668568, LOC668570, EG668413, LOC671401, EG546524, EG668584, EG544848, EG627871, LOC100042698, LOC629055, EG668588
Downstream geneEG668594, EG668600, LOC100042727, LOC673301, EG668605, LOC668614, LOC100042751, LOC100043371, EG668455, LOC100042755, LOC100043377
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-218B18.bB6Ng01-218B18.g
ACCGA034325GA034326
length9941,221
definitionB6Ng01-218B18.b B6Ng01-218B18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttttgtttgtcctggttcacatcaaatgtggtacaattcacgct
acaggaaaaattacgaaagcaattactgttataaagctatgagttgttct
attttcctcatatagatgaaatacatcatataaatatcccatataaaaag
gatgttataaatgtctgccatgtaataaccatcacagatatctcgaaaga
tgcaaaacaacccaaaatgaggaagaaccccatgaacatataaagtgata
aaaccagatgatctggtacatctttatcagtagaccaatttgtaaacttt
attcatcttgatgaaatgattgaacagggaaattaatgtagtaaacatat
cacatgtgccaattttcattgcaggtatgtaagtaatcatattggagaga
aactctatgactgtaataaatgttctaaagccttttcatgtcccagtcat
ctccaatgtcacaaaaaaagacaaattggagagaaaacacatgaacataa
ccaatgtggtaaagcctttccaacacccagtcatcttcaatatcataaaa
gaacccatactggagagaaaccttatgaatgtcatcaatgtggtcaaggc
tttaaaaaatgcagtcatctccaacatcataaaagaacacatactggaga
gaaaccctatgaatgtaatcaacgtggtaaagcctttgcaagacccagtc
atctccaatgtcataagagaacacatactggagtgaaaccctacaaatgt
aatcaatgtggtaaagcttttacaagtcccaatggtctccaatatcataa
aagaacacatactggagagaaaccctatgaatgtattcaatgtggtaaag
actttgcaagtcccagtcatctcaaacgtcataaaagaatatatactgga
gagaaacccttatgaatgttatcaatgtggtaaagtccttttgtagatca
cagtcatctacaatgtcaataaaagaacacatactggaggagaa

gaattcctctcgaaagacttcaccctattcatttaaaatgttcataagca
acacaggtgaaccttcaactcaatttcctttaaaattttatggtacttag
attatgacttctgtgtcaggaagtcagtggaggaagcaccagaattacat
gaatatatggtcaaggaagcgtacattgactttacagtgatgtcagtacc
atgctttgtgatgtacacatgtatgggatattttaggatgcagtgactta
tgatgatgttcacgtgaacttcactggggaagagtggaatttgctggatc
cttcccagaagagtctctacaaagatgtgatgctggagacctactggaac
ctcactgttataggtatgactgtgaattttctttcctttccaaaatagtg
ggaagacatgtctcttggttagtgatggtgctctgttattacaattgaga
acaaggaagactgagttgaatagtgtccagtgatgtgaaaattcacagta
ccttgaattttgccttatttccaataatgtatcattcattattctggtat
tgtcttttaggctacacttgggaaaaccatcatattgaaagacattgtca
aagttcaagaagaaatgaaaggtaattttcacgtgaaaacttatgcaatt
atgcctctaaggaaattttactatgatatggaagctctaaatcaaagcac
gagtgtaaaatgtcaatacttaaagtataactataattacaatatttttt
tttaatatttatttatttattgtatataagtacactgtagctgtccgcag
atactccagaagagggcatcaaattttgttacagatggttatgagccacc
atgtggttgcagggatttgaactcaggaccttcgggaagagcagtctgtg
ctctttaccactgagccatcacggcagccctaattatactatttcttatt
taaatgtacctgcctagatatagtttatctgatttatcttatcaaagcat
tccttttttaaaaaaaagaccgaggaaaacatttgcctttaaggataact
ttttattcaatttgtaccttctactagagcctatactgatctgacacttg
tataggactttacaaggaccttagattatgcacatcgatagtgataaaat
tatatgcaaaaccttcgataagcaatattccagtgggaaaggttggtgaa
ttatctcatatatctttgagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_19742351_19743236
seq2: B6Ng01-218B18.b_48_933

seq1  GAATTCTTTTGTTTGTCCTGGTTCACATCAAATGTGGTACAATTCACGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTGTTTGTCCTGGTTCACATCAAATGTGGTACAATTCACGCT  50

seq1  ACAGGAAAAATTACGAAAGCAATTACTGTTATAAAGCTATGAGTTGTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAAAAATTACGAAAGCAATTACTGTTATAAAGCTATGAGTTGTTCT  100

seq1  ATTTTCCTCATATAGATGAAATACATCATATAAATATCCCATATAAAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCTCATATAGATGAAATACATCATATAAATATCCCATATAAAAAG  150

seq1  GATGTTATAAATGTCTGCCATGTAATAACCATCACAGATATCTCGAAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTATAAATGTCTGCCATGTAATAACCATCACAGATATCTCGAAAGA  200

seq1  TGCAAAACAACCCAAAATGAGGAAGAACCCCATGAACATATAAAGTGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAACAACCCAAAATGAGGAAGAACCCCATGAACATATAAAGTGATA  250

seq1  AAACCAGATGATCTGGTACATCTTTATCAGTAGACCAATTTGTAAACTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAGATGATCTGGTACATCTTTATCAGTAGACCAATTTGTAAACTTT  300

seq1  ATTCATCTTGATGAAATGATTGAACAGGGAAATTAATGTAGTAAACATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATCTTGATGAAATGATTGAACAGGGAAATTAATGTAGTAAACATAT  350

seq1  CACATGTGCCAATTTTCATTGCAGGTATGTAAGTAATCATATTGGAGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGTGCCAATTTTCATTGCAGGTATGTAAGTAATCATATTGGAGAGA  400

seq1  AACTCTATGACTGTAATAAATGTTCTAAAGCCTTTTCATGTCCCAGTCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTATGACTGTAATAAATGTTCTAAAGCCTTTTCATGTCCCAGTCAT  450

seq1  CTCCAATGTCACAAAAAAAGACAAATTGGAGAGAAAACACATGAACATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAATGTCACAAAAAAAGACAAATTGGAGAGAAAACACATGAACATAA  500

seq1  CCAATGTGGTAAAGCCTTTCCAACACCCAGTCATCTTCAATATCATAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGTGGTAAAGCCTTTCCAACACCCAGTCATCTTCAATATCATAAAA  550

seq1  GAACCCATACTGGAGAGAAACCTTATGAATGTCATCAATGTGGTCAAGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCATACTGGAGAGAAACCTTATGAATGTCATCAATGTGGTCAAGGC  600

seq1  TTTAAAAAATGCAGTCATCTCCAACATCATAAAAGAACACATACTGGAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAAATGCAGTCATCTCCAACATCATAAAAGAACACATACTGGAGA  650

seq1  GAAACCCTATGAATGTAATCAACGTGGTAAAGCCTTTGCAAGACCCAGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCCTATGAATGTAATCAACGTGGTAAAGCCTTTGCAAGACCCAGTC  700

seq1  ATCTCCAATGTCATAAGAGAACACATACTGGAGTGAAACCCTACAAATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCAATGTCATAAGAGAACACATACTGGAGTGAAACCCTACAAATGT  750

seq1  AATCAATGTGGTAAAGCTTTTACAAGTCCCAATGGTCTCCAATATCATAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAATGTGGTAAAGCTTTTACAAGTCCCAATGGTCTCCAATATCATAA  800

seq1  AAGAACACATACTGGAGAGAAACCCTATGAATGTATTCAATGTGGTAAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACACATACTGGAGAGAAACCCTATGAATGTATTCAATGTGGTAAAG  850

seq1  ACTTTGCAAGTCCCAGTCATCTCAAACGTCATAAAA  886
      ||||||||||||||||||||||||||||||||||||
seq2  ACTTTGCAAGTCCCAGTCATCTCAAACGTCATAAAA  886


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