BAC Information

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BAC

Clone NameB6Ng01-219B18
Chromosome12 (Build37)
Map Location 45,758,553 - 45,759,710
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039059, ENSMUSG00000066507, LOC100039081, LOC664854, Dnajb9, LOC100039062, Pnpla8, Nrcam, EG620025
Downstream geneStxbp6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-219B18.bB6Ng01-219B18.g
ACCGA035051GA035052
length1,159140
definitionB6Ng01-219B18.b B6Ng01-219B18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccattaaaaccaagtgaaattttgtagggggacactacactgatc
caggggatttgtgagaaagggcaatctacttggaagacctttgccatttc
agattagagactcactcctgacagttctctagagtagtcacacatgataa
acttacttcagctaagattgtaactctagttttccaaggtgccagaggcg
tgcaggcatctatgagacacagagttctaagttaatacagttttaaaaag
gttcactagccagagccactacctatggctttgagagagctttgacaacg
atgaaatcactgcattttgagccatcccctaaccaactgactcacacggt
gaggtcaaaaccaatgctcctagatccaaatccagtatgacacacaggac
ttttagatgatagctcatttctccttctaggttcttgttctgcttattct
cgtggagattggttacttcttttaagactttattttggtgtggtatttca
cctggtatgcaccctgtatagtctcacttgtgccttactcttctgatctt
tctcttcaacacccttacttagttttcgttgcttctcagtatgcacatca
cttctaataaattctggctgtgtgtatcataaataaagataggctatatt
cactgtaaatatatggctcttataccttgattgagagtgctatcaagcag
aacaagcaggaatagtgtccacactgggcacagcctgggcctcctccacc
ttgtgctaaagacaccccaaacaggacctctaggacctttggcttatcta
cacagaaggaagaaatgatagatgtgcacagaataaacttttggggtcca
cagccttaaaatgcgttccaataaaatcataggactctagtcatagaaag
gaacatattctccaaggtggcatggagtgaaattagaagaagtgttataa
gtttcagctgggcaaggggtagttttattaattaggaacacatatcatgc
atcacagtatatattctatgtacctgttgtgcaccagttctcagctgtgc
atgaactaaaatagattccccaagtgttccccaaacattcagaattcatc
attttaggaaagtttctatttttcctaaagtctcaatggaagcctcattc
tcccaagcc

caagactgtgttcattcagacatgatgtacctcaagatgatccactcaag
agactggagaatcaaggaagtttagaggtcagatagggttgggggtggag
gcatccacctggagacagagtggggaggggaggaggtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_45758553_45759710
seq2: B6Ng01-219B18.b_46_1204

seq1  GAATTCCATTAAAACCAAGTGAAATTTTGTAGGGGGACACTACACTGATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTAAAACCAAGTGAAATTTTGTAGGGGGACACTACACTGATC  50

seq1  CAGGGGATTTGTGAGAAAGGGCAATCTACTTGGAAGACCTTTGCCATTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGATTTGTGAGAAAGGGCAATCTACTTGGAAGACCTTTGCCATTTC  100

seq1  AGATTAGAGACTCACTCCTGACAGTTCTCTAGAGTAGTCACACATGATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAGAGACTCACTCCTGACAGTTCTCTAGAGTAGTCACACATGATAA  150

seq1  ACTTACTTCAGCTAAGATTGTAACTCTAGTTTTCCAAGGTGCCAGAGGCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTACTTCAGCTAAGATTGTAACTCTAGTTTTCCAAGGTGCCAGAGGCG  200

seq1  TGCAGGCATCTATGAGACACAGAGTTCTAAGTTAATACAGTTTTAAAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGCATCTATGAGACACAGAGTTCTAAGTTAATACAGTTTTAAAAAG  250

seq1  GTTCACTAGCCAGAGCCACTACCTATGGCTTTGAGAGAGCTTTGACAACG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCACTAGCCAGAGCCACTACCTATGGCTTTGAGAGAGCTTTGACAACG  300

seq1  ATGAAATCACTGCATTTTGAGCCATCCCCTAACCAACTGACTCACACGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATCACTGCATTTTGAGCCATCCCCTAACCAACTGACTCACACGGT  350

seq1  GAGGTCAAAACCAATGCTCCTAGATCCAAATCCAGTATGACACACAGGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCAAAACCAATGCTCCTAGATCCAAATCCAGTATGACACACAGGAC  400

seq1  TTTTAGATGATAGCTCATTTCTCCTTCTAGGTTCTTGTTCTGCTTATTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGATGATAGCTCATTTCTCCTTCTAGGTTCTTGTTCTGCTTATTCT  450

seq1  CGTGGAGATTGGTTACTTCTTTTAAGACTTTATTTTGGTGTGGTATTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGAGATTGGTTACTTCTTTTAAGACTTTATTTTGGTGTGGTATTTCA  500

seq1  CCTGGTATGCACCCTGTATAGTCTCACTTGTGCCTTACTCTTCTGATCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTATGCACCCTGTATAGTCTCACTTGTGCCTTACTCTTCTGATCTT  550

seq1  TCTCTTCAACACCCTTACTTAGTTTTCGTTGCTTCTCAGTATGCACATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCAACACCCTTACTTAGTTTTCGTTGCTTCTCAGTATGCACATCA  600

seq1  CTTCTAATAAATTCTGGCTGTGTGTATCATAAATAAAGATAGGCTATATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTAATAAATTCTGGCTGTGTGTATCATAAATAAAGATAGGCTATATT  650

seq1  CACTGTAAATATATGGCTCTTATACCTTGATTGAGAGTGCTATCAAGCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTAAATATATGGCTCTTATACCTTGATTGAGAGTGCTATCAAGCAG  700

seq1  AACAAGCAGGAATAGTGTCCACACTGGGCACAGCCTGGGCCTCCTCCACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGCAGGAATAGTGTCCACACTGGGCACAGCCTGGGCCTCCTCCACC  750

seq1  TTGTGCTAAAGACACCCCAAACAGGACCTCTAGGACCTTTGGCTTATCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCTAAAGACACCCCAAACAGGACCTCTAGGACCTTTGGCTTATCTA  800

seq1  CACAGAAGGAAGAAATGATAGATGTGCACAGAATAAACTTTTGGGGTCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAAGGAAGAAATGATAGATGTGCACAGAATAAACTTTTGGGGTCCA  850

seq1  CAGCCTTAAAATGCGTTCCAATAAAATCATAGGACTCTAGTCATAG-AAG  899
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CAGCCTTAAAATGCGTTCCAATAAAATCATAGGACTCTAGTCATAGAAAG  900

seq1  GAACATATTCTCCAAGGTGGCATGGAGTGAAATTAG-AGAAGTGTTATAA  948
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GAACATATTCTCCAAGGTGGCATGGAGTGAAATTAGAAGAAGTGTTATAA  950

seq1  GTTTCAGGCTGGGCAAGGGGTAGTTTTATTAATTAGGAACACATATCATG  998
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCA-GCTGGGCAAGGGGTAGTTTTATTAATTAGGAACACATATCATG  999

seq1  CATCACAGTATATATTCTATGTACCTGTTGTGCACCAGTTCTCAGCTGTG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACAGTATATATTCTATGTACCTGTTGTGCACCAGTTCTCAGCTGTG  1049

seq1  CATGAACTTAAATAGGATTCCCAAGTGTTCCCCAACATTTCAGATTCCAT  1098
      |||||||| ||||||  | ||||||||||||||||   |||||| | |||
seq2  CATGAACTAAAATAGATTCCCCAAGTGTTCCCCAAACATTCAGAATTCAT  1099

seq1  TCATTTAGGAAAGGTTCCTATTTTTCCTAGAGTCTCCATTGGAAG-CTCA  1147
         ||||||||| ||| |||||||||||| ||||| || |||||| ||||
seq2  CATTTTAGGAAA-GTTTCTATTTTTCCTAAAGTCT-CAATGGAAGCCTCA  1147

seq1  -TCTCCCCAGCC  1158
       |||||| ||||
seq2  TTCTCCCAAGCC  1159


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