BAC Information

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BAC

Clone NameB6Ng01-220C18
Chromosome12 (Build37)
Map Location 95,371,360 - 95,372,533
singlet/doubletsinglet
Overlap genenone
Upstream gene2610022K04Rik-ps, EG633639
Downstream geneLOC217786, LOC100039603
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-220C18.bB6Ng01-220C18.g
ACCGA035799GA035800
length1,1521,086
definitionB6Ng01-220C18.b B6Ng01-220C18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaatgtaagcctttgaagatgcatatatgatagtgatttataat
aaaatttataccatataccaagtattttgctgaacattacaaatattaag
tgcatatatttgatgttaatatggatgttacctcacgacttgactgaact
aacatttagatatcttgaaattatctctttaatttatacaatagaaaact
gagtatttatagagttatccagctattgtaaattgagttttagatttttt
tgatgatgcacagagacatcttatgagctatagggtaaacttcacactag
ttcataacagggagtacacatacttgcttattcaatattaattaacttta
tagcactatttgtttcaagtgagtgtttaatatatagagactcttatata
tattctctttcgtgactggatttcttcccttagaaatgtatgttaaaata
cattcatatggtaaataactctatactaattgtaaataataacagctaaa
ttaattttactaattttatgattttattataagctaaattatgttatttg
aaaaataatttctattgaatacagtacatagcctgtatgtattttgtgct
cctattttcagtagacatttcattttttatttgtcttgaagaactaaagt
gccattcaaatgttagctcaatgcttactccttttaaaaacttggtatgt
aatttaaaaatgactgggtcattttgctttctatatcctcaccaacagtt
gttattatctgtctttttatcataccagttaagtgcttggtttggaatta
gatttctatacaaaacaaagcttaaccaatttttataaattcttgttgac
catttgcatgctttattgaaaaaaaaatgtttgctaaaagtttaactagg
acattgccagtatgttattgaattgtaggaataaattagcacatggtgta
gaagtcatttttgggtagagaggtctgtagtgatgattctcatacatgcc
agacaaactcactgaagcagtcccagtgatctgtcatgctagttgcctct
gctgatcacttactgtatcatttggagttagtcagtgacaggctacactg
tagcacaatacctccacatgtttacagcacattgaagtatggcacaaagc
ag

gaattcaagaagtcaacctccaaaaaaaccaaattgggagcagagttaaa
cagaaaactcacaaccaaagaatctcacacggctgagaagtacttaaaga
aatgtataaagtccttagtcatcacatcaaccatgggataccaccttaca
ccaatcagaaagcctaagatcaaaaactcaagtgatagcacatgctgatg
aggatgtgggtaaagaggaatactcatccattgctggtggaattacaaac
tggtacaccatcctgggaatgaatctgacagttcctcagaaaatttcaaa
gagttctacctgaagactgagatttactgcttctgggtatataccctaat
aatgtcccaccatgccacaaagacatgtgctccactttgttcataggagc
tttattagtaatagtcagataatggaaacaacccacctgtctctcaatcg
aggaatggataccgaaaatggggttcatttacacaatgaatactattcgg
ctcttaaaaacaaggatatcgtgaattttgcagtcaaatagatggaacta
gaaaatatcatcctgagtgagataactcagacccagaagacatgaatggt
tatgcacttgctgattagtggatattagtcaaaaattatagaatacctag
gatacaacaaacagacagtaagaagtgttaacaagaaaaacaggccaagc
aaggatgcttcaatcccacttagaaggggaaagaaaatcatcaaataatc
agagaaatggaggggtctgggtgggaaaggagtgggggaaagcagaatct
cttttctttttaatgttatcagtattcattccactaaatagagatctaaa
gataagaatttgtcactataacttctgaactcctaacaactgaagtcatt
tcggcaactggtataagatgacttttgcatgtgttgacttcctgtccatt
aagaaattggactagaccattttttcttgaaattattaaataatccataa
gggtaatgattatggccatctatccctcctgagaaagatctaccttctgg
catatacctaaatgaaaacaaaacaggtccaaatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_95371360_95372533
seq2: B6Ng01-220C18.b_42_1193

seq1  GAATTCAAATGTAAGCCTTTGAAGATGCATATATGATAGTGATTTATAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATGTAAGCCTTTGAAGATGCATATATGATAGTGATTTATAAT  50

seq1  AAAATTTATACCATATACCAAGTATTTTGCTGAACATTACAAATATTAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTATACCATATACCAAGTATTTTGCTGAACATTACAAATATTAAG  100

seq1  TGCATATATTTGATGTTAATATGGATGTTACCTCACGACTTGACTGAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATATATTTGATGTTAATATGGATGTTACCTCACGACTTGACTGAACT  150

seq1  AACATTTAGATATCTTGAAATTATCTCTTTAATTTATACAATAGAAAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTAGATATCTTGAAATTATCTCTTTAATTTATACAATAGAAAACT  200

seq1  GAGTATTTATAGAGTTATCCAGCTATTGTAAATTGAGTTTTAGATTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATTTATAGAGTTATCCAGCTATTGTAAATTGAGTTTTAGATTTTTT  250

seq1  TGATGATGCACAGAGACATCTTATGAGCTATAGGGTAAACTTCACACTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGATGCACAGAGACATCTTATGAGCTATAGGGTAAACTTCACACTAG  300

seq1  TTCATAACAGGGAGTACACATACTTGCTTATTCAATATTAATTAACTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAACAGGGAGTACACATACTTGCTTATTCAATATTAATTAACTTTA  350

seq1  TAGCACTATTTGTTTCAAGTGAGTGTTTAATATATAGAGACTCTTATATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCACTATTTGTTTCAAGTGAGTGTTTAATATATAGAGACTCTTATATA  400

seq1  TATTCTCTTTCGTGACTGGATTTCTTCCCTTAGAAATGTATGTTAAAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTCTTTCGTGACTGGATTTCTTCCCTTAGAAATGTATGTTAAAATA  450

seq1  CATTCATATGGTAAATAACTCTATACTAATTGTAAATAATAACAGCTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCATATGGTAAATAACTCTATACTAATTGTAAATAATAACAGCTAAA  500

seq1  TTAATTTTACTAATTTTATGATTTTATTATAAGCTAAATTATGTTATTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTTACTAATTTTATGATTTTATTATAAGCTAAATTATGTTATTTG  550

seq1  AAAAATAATTTCTATTGAATACAGTACATAGCCTGTATGTATTTTGTGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAATTTCTATTGAATACAGTACATAGCCTGTATGTATTTTGTGCT  600

seq1  CCTATTTTCAGTAGACATTTCATTTTTTATTTGTCTTGAAGAACTAAAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTTTCAGTAGACATTTCATTTTTTATTTGTCTTGAAGAACTAAAGT  650

seq1  GCCATTCAAATGTTAGCTCAATGCTTACTCCTTTTAAAAACTTGGTATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTCAAATGTTAGCTCAATGCTTACTCCTTTTAAAAACTTGGTATGT  700

seq1  AATTTAAAAATGACTGGGTCATTTTGCTTTCTATATCCTCACCAACAGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAAAAATGACTGGGTCATTTTGCTTTCTATATCCTCACCAACAGTT  750

seq1  GTTATTATCTGTCTTTTTATCATACCAGTTAAGTGCTTGGTTTGGAATTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTATCTGTCTTTTTATCATACCAGTTAAGTGCTTGGTTTGGAATTA  800

seq1  GATTTCTATACAAAACAAAGCTTAACCAATTTTTATAAATTCTTGTTGAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCTATACAAAACAAAGCTTAACCAATTTTTATAAATTCTTGTTGAC  850

seq1  CATTTGCATGCTTTATTGAAAAAAAAATGTTTGCTAAAAGTTTAACTAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGCATGCTTTATTGAAAAAAAAATGTTTGCTAAAAGTTTAACTAGG  900

seq1  ACATTGCCAGTATGTTATTGAATTGTAGGAATAAATTAGCACATGGTGTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGCCAGTATGTTATTGAATTGTAGGAATAAATTAGCACATGGTGTA  950

seq1  GAAGTCATTTTTTGGGTAGAGAGGTCTGTAGTGATTGATTCTCATTACAT  1000
      ||||||| |||||||||||||||||||||||||| ||||||||| |||| 
seq2  GAAGTCA-TTTTTGGGTAGAGAGGTCTGTAGTGA-TGATTCTCA-TACA-  996

seq1  TGCCAGACAAAACTCACTGAAGCAGTTCCCAGTGATCCTGTCAATGCTTA  1050
      |||||||| |||||||||||||||| |||||||||| ||||| |||| ||
seq2  TGCCAGAC-AAACTCACTGAAGCAG-TCCCAGTGAT-CTGTC-ATGC-TA  1041

seq1  GTTGCCTCTGCCTTGATCACTTTACTTGTATTCATTTGGAG-TAGTCAAG  1099
      |||||||||||  ||||||| |||| |||| |||||||||| ||||| ||
seq2  GTTGCCTCTGC--TGATCAC-TTAC-TGTA-TCATTTGGAGTTAGTC-AG  1085

seq1  TGACAAAGAGCTACACGGTAGGCAC-ATA-CTCCACAATGTTTACAAGCA  1147
      |||||    ||||||| ||| |||| ||| |||||| |||||||| ||||
seq2  TGACA---GGCTACACTGTA-GCACAATACCTCCAC-ATGTTTAC-AGCA  1129

seq1  CATTGTAAGTAATGACAAACAAAGCAG  1174
      ||||| |||| ||| |  |||||||||
seq2  CATTG-AAGT-ATGGC--ACAAAGCAG  1152


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