BAC Information

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BAC

Clone NameB6Ng01-220M02
Chromosome6 (Build37)12 (Build37)
Map Location 18,835,116 - 18,835,149101,413,357 - 101,414,420
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-220M02.bB6Ng01-220M02.g
ACCGA036234GA036235
length7551,058
definitionB6Ng01-220M02.b B6Ng01-220M02.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,116 - 18,835,149)(101,413,357 - 101,414,420)
sequence
gaattctccaagctctgcctaatgtttgtctttgggtctctgcatcttgt
tccatcagttgctgggtgatggtgatagttatactaggtgcctgtctgcc
ataatgttattaatagtgtcagggatgggcactctctcatggcatgggtc
ttaagctagaccagtcattggttggctatttcctcaatttctgctccatc
tttacccctgcatatcttggaattgtgggtctaaggttttgtggctggct
tggtatcccagtccctctattggaagtctttcctggttacaggagatggc
catttcaggttccatatcacccattgctgggagccttggctagggtcccc
ctcatagattcctggaaaattccattgctctaggtttctagctaatccca
gaaatgcccccccccaattccactgctctcatctcctccccatccccaac
ccagttccctccctccatctgccccctccctgtctattctatttctcctt
ctcagtgagagtcaagcaacccccattgggccctccttgttcttgtattg
tacagaattgttttagatttcctgtttttttttttttaatttttccatat
gaagttaagtattgtttcttccaagtctgtaaagaatttgtattggcatt
ttgaagggaattacatcaaatctgtagattgcttttggtaaggtggtcat
ttttactatgttatcctaccgatccatgagcatgggaggtctttccatct
tctga

gaattcagaatgctacatactggtaatgtctttccactaatagtgaaaag
cccaaggtgttcagggctcctgaaggaccctgcttgtatctccagaaaag
ctagccctgatagctaagtatcccaatgtttggcccaggtctctcggggc
atttgcgtctgtttcatctttatcaaagtgaaaggcatggtgattgttga
gggctctccttgttttaaaattctcttcagggtttgaggcacacctgagc
aatgtggtctggatgccgagctcggcaatgctgtggacagaaagccgaga
ggcggcgagtttctagtgttttgtttctctgtttctgtttgttttgtgtg
agcaattgaacccacagccccactcatgctaggcaagctctctaccactg
agctatgctcccagctctttagtgttttccttcagaaatataattgaaag
gtgttttttacatttttttattttaatttttttcaagcgtgtcttatgtg
tggtgtatgggcaacatacatacatagctatgtatgtacacaaaggccag
tagaggatgtcagatcactctccactgtgtatgtgtttatttttattttt
attttttttttaggcagtgtctctcactgagcctgaagctagcctattgg
tcagcaagctctagctagcttcctgtctccacctccctggggttacaaat
ctatatggccacactggctttttacatcagtgttggaagtttagactctg
gtgcttatgtgtaacctggaagcactcttactcagtgaaccatctctcca
gccccacctgcaaggttgttttgttttgtttgtccatggggccacagagc
atgattaagtcctggggggaatttgaagtataactgggtcagtatttggg
aggaaactgtgtatccggatatggattgtgattcatcatgctaaattcca
agctgacttaccgtgatccatgacttttctaaaacaaatactatgggtta
gatttgctactgagatagggtctttttaaatatttatgccgagggctagt
cacttatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835116_18835149
seq2: B6Ng01-220M02.b_768_801 (reverse)

seq1  TCAGAAGATGGAAAAATCTCCCATGCTCATGGAT  34
      |||||||||||||| | |||||||||||||||||
seq2  TCAGAAGATGGAAAGACCTCCCATGCTCATGGAT  34


seq1: chr12_101413357_101414420
seq2: B6Ng01-220M02.g_69_1126 (reverse)

seq1  CTTAAGTGACTAACCCACGGCATAAATATTTTAAAAAGGACCCCTATTCT  50
      | |||||||||| ||| ||||||||||| |||||||||   ||||| |||
seq2  CATAAGTGACTAGCCCTCGGCATAAATA-TTTAAAAAG--ACCCTA-TCT  46

seq1  CAGTAGCAAATTCTAAACCAATAGTATTTGTTTTTAGAAAGTCATGAATC  100
      |||||||||| ||| |||| ||||||||||||||   ||||||||| || 
seq2  CAGTAGCAAA-TCT-AACCCATAGTATTTGTTTTAGAAAAGTCATGGAT-  93

seq1  CACGGTAAGTCAGCTTGG-ATTTAGCATGATGAATCACATCCCATATCCG  149
      |||||||||||||||||| ||||||||||||||||||||  |||||||||
seq2  CACGGTAAGTCAGCTTGGAATTTAGCATGATGAATCACAATCCATATCCG  143

seq1  GATACACAGTTTCCTCCCAAATACTGACCCAGTTATACTTCAAATTCCCC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACACAGTTTCCTCCCAAATACTGACCCAGTTATACTTCAAATTCCCC  193

seq1  CCAGGACTTAATCATGCTCTGTGGCCCCATGGACAAACAAAACAAAACAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGACTTAATCATGCTCTGTGGCCCCATGGACAAACAAAACAAAACAA  243

seq1  CCTTGCAGGTGGGGCTGGAGAGATGGTTCACTGAGTAAGAGTGCTTCCAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCAGGTGGGGCTGGAGAGATGGTTCACTGAGTAAGAGTGCTTCCAG  293

seq1  GTTACACATAAGCACCAGAGTCTAAACTTCCAACACTGATGTAAAAAGCC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACACATAAGCACCAGAGTCTAAACTTCCAACACTGATGTAAAAAGCC  343

seq1  AGTGTGGCCATATAGATTTGTAACCCCAGGGAGGTGGAGACAGGAAGCTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGGCCATATAGATTTGTAACCCCAGGGAGGTGGAGACAGGAAGCTA  393

seq1  GCTAGAGCTTGCTGACCAATAGGCTAGCTTCAGGCTCAGTGAGAGACACT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGAGCTTGCTGACCAATAGGCTAGCTTCAGGCTCAGTGAGAGACACT  443

seq1  GCCTAAAAAAAAAATAAAAATAAAAATAAACACATACACAGTGGAGAGTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAAAAAAAAAATAAAAATAAAAATAAACACATACACAGTGGAGAGTG  493

seq1  ATCTGACATCCTCTACTGGCCTTTGTGTACATACATAGCTATGTATGTAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGACATCCTCTACTGGCCTTTGTGTACATACATAGCTATGTATGTAT  543

seq1  GTTGCCCATACACCACACATAAGACACGCTTGAAAAAAATTAAAATAAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCCCATACACCACACATAAGACACGCTTGAAAAAAATTAAAATAAAA  593

seq1  AAATGTAAAAAACACCTTTCAATTATATTTCTGAAGGAAAACACTAAAGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTAAAAAACACCTTTCAATTATATTTCTGAAGGAAAACACTAAAGA  643

seq1  GCTGGGAGCATAGCTCAGTGGTAGAGAGCTTGCCTAGCATGAGTGGGGCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGAGCATAGCTCAGTGGTAGAGAGCTTGCCTAGCATGAGTGGGGCT  693

seq1  GTGGGTTCAATTGCTCACACAAAACAAACAGAAACAGAGAAACAAAACAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTTCAATTGCTCACACAAAACAAACAGAAACAGAGAAACAAAACAC  743

seq1  TAGAAACTCGCCGCCTCTCGGCTTTCTGTCCACAGCATTGCCGAGCTCGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAACTCGCCGCCTCTCGGCTTTCTGTCCACAGCATTGCCGAGCTCGG  793

seq1  CATCCAGACCACATTGCTCAGGTGTGCCTCAAACCCTGAAGAGAATTTTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCAGACCACATTGCTCAGGTGTGCCTCAAACCCTGAAGAGAATTTTA  843

seq1  AAACAAGGAGAGCCCTCAACAATCACCATGCCTTTCACTTTGATAAAGAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAGGAGAGCCCTCAACAATCACCATGCCTTTCACTTTGATAAAGAT  893

seq1  GAAACAGACGCAAATGCCCCGAGAGACCTGGGCCAAACATTGGGATACTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAGACGCAAATGCCCCGAGAGACCTGGGCCAAACATTGGGATACTT  943

seq1  AGCTATCAGGGCTAGCTTTTCTGGAGATACAAGCAGGGTCCTTCAGGAGC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATCAGGGCTAGCTTTTCTGGAGATACAAGCAGGGTCCTTCAGGAGC  993

seq1  CCTGAACACCTTGGGCTTTTCACTATTAGTGGAAAGACATTACCAGTATG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAACACCTTGGGCTTTTCACTATTAGTGGAAAGACATTACCAGTATG  1043

seq1  TAGCATTCTGAATTC  1064
      |||||||||||||||
seq2  TAGCATTCTGAATTC  1058


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