BAC Information

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BAC

Clone NameB6Ng01-221L01
Chromosome12 (Build37)
Map Location 96,270,167 - 96,271,079
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC217786
Downstream geneLOC100039603, LOC667688, Flrt2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-221L01.bB6Ng01-221L01.g
ACCGA036914GA036915
length1,224924
definitionB6Ng01-221L01.b B6Ng01-221L01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttgatctttatgtgaaggccattaagagaaaaccagcttccaca
tggctaggaggagcatctcaaagtcaaaccccacagtaacacacttcctc
caacaaggccacacctactccaacaaaactcccactactgtcactcccta
ggccaaacatattcaaactaccaccttacagtccctggcccccataggct
ttttcaaacacatgagtcttttgaggctatgcctaggcatagaataatgc
aaactacatttattcctacttcaaatatgccataatctataacagtctct
acaatgttgaaagtccaaccttcagtctttcctaagttcttgcaagctct
aaactgtaataccttaagaaatcataatcaaaacaatagatcatatacat
ccaacatgaaaggatatatattaccattcctaaatatcatagggaagaaa
tactggaccaaagaaagacccgaaaaccagctgaaaaaaaacccaaactc
tgtacttccatgtttgatgtcaaggtacatttcagatctccaactccttt
ccttcttgttgactgctattggccagatctggcattcagtggcaacaaat
tttacactcttggactagctccactctcctagcagctttactccacgtgt
atgccatggctgtgatatctgtagcatcttggggtattcacgacaacttg
aactttacagcttcttgtttcagtatcttagaaccacagatgatctgggc
tcctccacaaggcttggatcacttctccagtcctgcacaatgtagtactc
tggttgactctaccccactactgctgatgttctaggtggatatcccatag
taatggcatttccaacatgctggggtattctgatgcaaccaggcttcacc
aatagcctctcacaagaatcccttcatggtgccaaaccctcaactttctt
tgcatgaccccttcagtccttggctttcaactgcaattgtgggctgcacc
tttcaccaaattgcctttcccaggttcttacacagtgccgcgcctttagc
ttaattcttcgatgatcccttatttagccttcttcgtactcctaagaaaa
acactttccagagatttcattctcaagtgttctgatatcatcttaacact
ataaattcctagctgcagctacagcaattcacctgttccaagtgtgtccc
tctttattatctgcgatgaggtta
gaattccagtagggtgattggagttggagccaagaacccatgtctgaatc
ttaacatttgaaacacagtcaaaggttagaagtctgaatatgacatattt
tatattgggaggaggtgaaacgctgaatttaaaatcatatcacattgaaa
atgtaataatttggtcgattacaatcatgaaatgattagtgattctttga
atcttctgatgactttagtcaagtcattgaggagtataaattatgtgaga
taatatgtattgtgctatgttgaatagttgctcccccaaagaaacattct
tgttgatctctgtgttattgtctttgaagatataactaaggtatcttatg
aagaaaatactgcagacctatagtgtcccaaagccaaaatgaatttaaac
agaatggaagaaacacaaagaaaggcataaaaacatctgatcatccttcc
taatgaaaacaggccataaaacactggccgcagagagttgatttatgtat
ttgtaagtcacaggaatccagacctttctgagaggcagaaaaacaaagag
aaaatcctggaacaaaactctctgggagttgtgagaagtgaatgttttga
tacctatcttgggttaaaaaatgtggcagactaaatttttgtttccaagc
atccttgatatgatttgttctactagctgtagccttctcgtattcctctt
caactcatagcatcactagataaatatcaaagatataggaaaaaccacta
gcctggctctcaatagttaacttagacctggcattgattatccttttgga
aaaccatctacttaggtgttagaatgatcagatcacatgttggattcatt
aattttgccatctgattcatgttaaaaagaaaattattcagttttattta
aggatttgtcagtaattaaataca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_96270167_96271079
seq2: B6Ng01-221L01.g_80_990 (reverse)

seq1  TGTATTTAATTACCTGAATAAATCCTTAACT-AAACTG-ATAATTTTCTT  48
      |||||||||||| ||| | |||||||||| | |||||| |||||||||||
seq2  TGTATTTAATTA-CTG-ACAAATCCTTAAATAAAACTGAATAATTTTCTT  48

seq1  TTTAACATGAATCCAGATGGCAAAATTAATGAATCCAACATGTGATCTGA  98
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TTTAACATGAAT-CAGATGGCAAAATTAATGAATCCAACATGTGATCTGA  97

seq1  TCATTTCTAACACCTAAGTAGATTGGTTTTCC-AAAGGATAATCAATGCC  147
      ||| |||||||||||||||||| ||||||||| |||||||||||||||||
seq2  TCA-TTCTAACACCTAAGTAGA-TGGTTTTCCAAAAGGATAATCAATGCC  145

seq1  AGGTCTAAGTTAACTATTGAGAGCCAGGCTAGTGGTTTTTCCTATATCTT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTAAGTTAACTATTGAGAGCCAGGCTAGTGGTTTTTCCTATATCTT  195

seq1  TGATATTTATCTAGTGATGCTATGAGTTGAAGAGGAATACGAGAAGGCTA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATTTATCTAGTGATGCTATGAGTTGAAGAGGAATACGAGAAGGCTA  245

seq1  CAGCTAGTAGAACAAATCATATCAAGGATGCTTGGAAACAAAAATTTAGT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTAGTAGAACAAATCATATCAAGGATGCTTGGAAACAAAAATTTAGT  295

seq1  CTGCCACATTTTTTAACCCAAGATAGGTATCAAAACATTCACTTCTCACA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCACATTTTTTAACCCAAGATAGGTATCAAAACATTCACTTCTCACA  345

seq1  ACTCCCAGAGAGTTTTGTTCCAGGATTTTCTCTTTGTTTTTCTGCCTCTC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCAGAGAGTTTTGTTCCAGGATTTTCTCTTTGTTTTTCTGCCTCTC  395

seq1  AGAAAGGTCTGGATTCCTTTGACTTACAAATACATAAATCAACTCTCTGC  447
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AGAAAGGTCTGGATTCCTGTGACTTACAAATACATAAATCAACTCTCTGC  445

seq1  GGCCAGTGTTTTATGGCCTGTTTTCATTCGGAAGGATGATCAGATGTTTT  497
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GGCCAGTGTTTTATGGCCTGTTTTCATTAGGAAGGATGATCAGATGTTTT  495

seq1  TATGCCTTTCTTTGTGTTTCTTCCATTCTGTTTAAATTC-TTTTGGCTTT  546
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TATGCCTTTCTTTGTGTTTCTTCCATTCTGTTTAAATTCATTTTGGCTTT  545

seq1  GGGACACTATAGGTCTGCAGTATTTTCTTCTTAAGATACCTTAGTTATAT  596
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GGGACACTATAGGTCTGCAGTATTTTCTTCATAAGATACCTTAGTTATAT  595

seq1  CTTCAAAGACAATAACACAGAGATCAACAAGAATGTTTCTTTGGGGGAGC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAAGACAATAACACAGAGATCAACAAGAATGTTTCTTTGGGGGAGC  645

seq1  AACTATTCAACATAGCACAATACATATTATCTCACATAATTTATACTCCT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATTCAACATAGCACAATACATATTATCTCACATAATTTATACTCCT  695

seq1  CAATGACTTGACTAAAGTCATCAGAAGATTCAAAGAATCACTAATCATTT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGACTTGACTAAAGTCATCAGAAGATTCAAAGAATCACTAATCATTT  745

seq1  ACTGATTGTAATTGACCAAATTATTACATTTTCAATCTGATATGATTTTA  796
        |||||||||| ||||||||||||||||||||||| |||||||||||||
seq2  CATGATTGTAATCGACCAAATTATTACATTTTCAATGTGATATGATTTTA  795

seq1  ACTTCAGCGTTTCACCTCCTCCCAATATAAAATATGTCATATTCAGACTT  846
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAGCGTTTCACCTCCTCCCAATATAAAATATGTCATATTCAGACTT  845

seq1  CTAACCTTTGACTGTGTTTCAAATGTTACTATTCAGACATGTGGTTCTTG  896
      ||||||||||||||||||||||||||||  ||||||||||| ||||||||
seq2  CTAACCTTTGACTGTGTTTCAAATGTTAAGATTCAGACATG-GGTTCTTG  894

seq1  GCTCCAACTCCAATCAC  913
      |||||||||||||||||
seq2  GCTCCAACTCCAATCAC  911