BAC Information

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BAC

Clone NameB6Ng01-222K05
Chromosome12 (Build37)
Map Location 60,680,276 - 60,681,402
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040183, Sec23a, Sip1, Trappc6b, Pnn, EG544872, Mia2, Mgea6, Fbxo33, LOC665628, LOC238199, LOC665639
Downstream geneLOC665644, EG622488, LOC665665, Ppia-ps12_475.1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-222K05.bB6Ng01-222K05.g
ACCGA037603GA037604
length1,2261,126
definitionB6Ng01-222K05.b B6Ng01-222K05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactcctagtcactcccattctcggggtgtaatagtggggtgatg
ggcaagcaacgaatcgggagctgtcacgccatatcaggtgctgaaacgtc
acactgcgggttataaaagcagcaccattttcccggtttgggatcttcct
gagaagcaagcaataaagctctcgccgcggaagattctggtttgttgcgc
ctttcttgccggtcgagcggacgcaataggttcacatagttattatatca
tagaaagaatttatgttctacataattttcttatctatttctttcaaagg
aatctttgtcaataatctttaaacatctgtaaatttctgaaatctttaga
ccagtattaaagtaaccctcgatttcagccctaaacagctaaacatctct
gtaaccctccttctaacctctgaaatatctccaaggatcagggaacatct
tgggagaggggataaaatgaatgtaacaatcaaagaatggacaagaatgc
ttgaaacactatcttctgaagctagggagttggcccagaggttaaaaaca
cttgatactcttgtagaagactctggttttatcccaagtatccaaacaac
agctgacaaccttcaataactccatttccaggggtccaacatcttttcct
gaccttcaaggtaactagacatagacataatatacatgcatatatgcagg
caaaacacccatacagtgttatggtttgtatatgcttggcccagggagtg
gcactattagaaggtgtggccctgttggagtaggtgtggccttgttgaag
tagatgtgtcactgtgggtgtgggctttaagactctcatcctagctgcct
ggaagccagtattctgctagcagccttcagatgaaactatagaactctga
gctcctcctccatcatgcctggatgtcgccatgttctttgatgattacag
gaacctctgaacctgtaagccagccccaattaaatgttattcttatagag
ttaccttggtcatgttatctgttcacagcagtaaacttcttactaggaca
tacaccttaaataaataaaataattaagtcactttttaaaaagaaagaaa
tgcctccatctagaacatgatgtgtgctatttataccatgagctcacaag
cagcttacaggtcactggcatgaatctgccaataggcaacgtatggaacc
tttcattgtggggggtagtagaagac
gaattcactttgttgaccaggctggcctcgaactcagaaatccgtctgct
tctgcctcccaagtgctgagattaaaggcatgcgccaccatgcctggctt
tagtattcttaatcactatttattgcccatctctgttatttattgcccat
ctctgtttgtgacctaacatccttgtgactaatattggaatctacaacca
gagccccaccttctaccaaccaaaatgcaaaaggcagcatccccaaggca
cagagcagaggttttcttattgtgctataacccaccaacctaatatttcc
aatgtgtttagaaagtgatttggtttatggctttcttctgttattacaag
actcatgaatttattattttattggaacatagaatttgggataacctgaa
tctgtcttcccaggctctgatcactcatatttgaggctccagaacaaaat
tcttagtctcatcccctttgaagtgagagttgcgtttcttgcattgacga
caggaaccctagaagcattgctgtttatgtgaataaatttgaagagacct
tgtgggaatgtcgcaatcaaaattctgttatatgaatgaggaacaacatt
caagcaacttctccttttgaatccacttcacgggggattttcctcctatc
tgaaggcttgccacatcagtgcacaacagcacaaaagctctcacacagct
caagagttgaattcagagtgaacaaccttttgtataaattcattgcgatt
tattaggctttgaagctatctcacaggtttttacatttcaaactggattt
tcttagtaatttggtttatgttacatttggttatctgtcagctaacgaat
aatattacctgcctcattctaacctttattgcattgataggtattaatac
aggattgcagctggtattgcctgtatttaaattagatttctaaagggtct
tgcaagcaaccactgaattatttttttttcagattgttgagatactcatt
taatccctttaaagaatgacagttgggtgacctatagagaatattttaaa
gaccccacagccgtactgttaattgcttaattcacctgaagtcaattgga
attgtggcctgtgccagctgagtcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_60680276_60681402
seq2: B6Ng01-222K05.g_68_1192

seq1  AATTCACTTTGTTGACCAGGCTGGCCTCGAACTCAGAAATCCGTCTGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCACTTTGTTGACCAGGCTGGCCTCGAACTCAGAAATCCGTCTGCTT  50

seq1  CTGCCTCCCAAGTGCTGAGATTAAAGGCATGCGCCACCATGCCTGGCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCCCAAGTGCTGAGATTAAAGGCATGCGCCACCATGCCTGGCTTT  100

seq1  AGTATTCTTAATCACTATTTATTGCCCATCTCTGTTATTTATTGCCCATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTCTTAATCACTATTTATTGCCCATCTCTGTTATTTATTGCCCATC  150

seq1  TCTGTTTGTGACCTAACATCCTTGTGACTAATATTGGAATCTACAACCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTGTGACCTAACATCCTTGTGACTAATATTGGAATCTACAACCAG  200

seq1  AGCCCCACCTTCTACCAACCAAAATGCAAAAGGCAGCATCCCCAAGGCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCACCTTCTACCAACCAAAATGCAAAAGGCAGCATCCCCAAGGCAC  250

seq1  AGAGCAGAGGTTTTCTTATTGTGCTATAACCCACCAACCTAATATTTCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAGAGGTTTTCTTATTGTGCTATAACCCACCAACCTAATATTTCCA  300

seq1  ATGTGTTTAGAAAGTGATTTGGTTTATGGCTTTCTTCTGTTATTACAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTTTAGAAAGTGATTTGGTTTATGGCTTTCTTCTGTTATTACAAGA  350

seq1  CTCATGAATTTATTATTTTATTGGAACATAGAATTTGGGATAACCTGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGAATTTATTATTTTATTGGAACATAGAATTTGGGATAACCTGAAT  400

seq1  CTGTCTTCCCAGGCTCTGATCACTCATATTTGAGGCTCCAGAACAAAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTTCCCAGGCTCTGATCACTCATATTTGAGGCTCCAGAACAAAATT  450

seq1  CTTAGTCTCATCCCCTTTGAAGTGAGAGTTGCGTTTCTTGCATTGACGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTCTCATCCCCTTTGAAGTGAGAGTTGCGTTTCTTGCATTGACGAC  500

seq1  AGGAACCCTAGAAGCATTGCTGTTTATGTGAATAAATTTGAAGAGACCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACCCTAGAAGCATTGCTGTTTATGTGAATAAATTTGAAGAGACCTT  550

seq1  GTGGGAATGTCGCAATCAAAATTCTGTTATATGAATGAGGAACAACATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGAATGTCGCAATCAAAATTCTGTTATATGAATGAGGAACAACATTC  600

seq1  AAGCAACTTCTCCTTTTGAATCCACTTCACGGGGGATTTTCCTCCTATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAACTTCTCCTTTTGAATCCACTTCACGGGGGATTTTCCTCCTATCT  650

seq1  GAAGGCTTGCCACATCAGTGCACAACAGCACAAAAGCTCTCACACAGCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCTTGCCACATCAGTGCACAACAGCACAAAAGCTCTCACACAGCTC  700

seq1  AAGAGTTGAATTCAGAGTGAACAACCTTTTGTATAAATTCATTGCGATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTTGAATTCAGAGTGAACAACCTTTTGTATAAATTCATTGCGATTT  750

seq1  ATTAGGCTTTGAAGCTATCTCACAGGTTTTTACATTTCAAACTGGATTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGCTTTGAAGCTATCTCACAGGTTTTTACATTTCAAACTGGATTTT  800

seq1  CTTAGTAATTTGGTTTATGTTACATTTGGTTATCTGTCAGGCTAACGAAT  850
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CTTAGTAATTTGGTTTATGTTACATTTGGTTATCTGTCA-GCTAACGAAT  849

seq1  AATATTACCTGCCTCATTCTAACCTTTATTGCATTGATAGGTATTAATAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTACCTGCCTCATTCTAACCTTTATTGCATTGATAGGTATTAATAC  899

seq1  AGGATTGCAGCTGGTATTGCCTGTATTTAAATTAGATTTCTAAAGGGTCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTGCAGCTGGTATTGCCTGTATTTAAATTAGATTTCTAAAGGGTCT  949

seq1  TGCAAGCAACCACTGAATTATTTTTTTTCAAGAATTGTTGAGATACTCAT  1000
      ||||||||||||||||||||||||||||  || |||||||||||||||||
seq2  TGCAAGCAACCACTGAATTATTTTTTTTTCAG-ATTGTTGAGATACTCAT  998

seq1  TAAAT-CCTTTAAAGAATGAACAGTTGGGTGAACTATAGAGAATA-TTTA  1048
      | ||| ||||||||||||| |||||||||||| |||||||||||| ||||
seq2  TTAATCCCTTTAAAGAATG-ACAGTTGGGTGACCTATAGAGAATATTTTA  1047

seq1  AAGACCCCACAGCCGTACTGTTTAATTGCTTTAAATCACCTGAAGTCAAT  1098
      |||||||||||||||||||| |||||||| |||| |||||||||||||||
seq2  AAGACCCCACAGCCGTACTG-TTAATTGC-TTAATTCACCTGAAGTCAAT  1095

seq1  TGGAATATGTGG-CTGTG-CAGCTGAGTCCA  1127
      |||||| ||||| ||||| ||||||||||||
seq2  TGGAAT-TGTGGCCTGTGCCAGCTGAGTCCA  1125