BAC Information

Click to search

BAC

Clone NameB6Ng01-226F22
Chromosome12 (Build37)
Map Location 19,766,986 - 19,768,054
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668558, LOC100042641, LOC668568, LOC668570, EG668413, LOC671401, EG546524, EG668584, EG544848, EG627871, LOC100042698, LOC629055, EG668588, LOC100042706
Downstream geneEG668594, EG668600, LOC100042727, LOC673301, EG668605, LOC668614, LOC100042751, LOC100043371, EG668455, LOC100042755, LOC100043377
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-226F22.bB6Ng01-226F22.g
ACCGA040330GA040331
length1,1791,074
definitionB6Ng01-226F22.b B6Ng01-226F22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagagcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagagacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatgtagctgtctcttgtgagactatgccagggccctagcaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggaggagctagagaaagtacccaaaggagctaaagggatcttcaaccc
tataggtgaacaacattatgaactaaccagtacccctgagctctggactc
tagctgcatatgtatcaaaggatggcctagtcgcatcactggaagagagg
cccaatgggcacgcagacctttgtggtgacctgttacaggtatcgtctaa
ggtctaaggggggaggaagattgggattg
gaattcatcaggtagactgaagtggaagtcagccctagtggatgaaaggt
tggttggcttctgttaagtgcagaagaccatgtggtaatctgggttcaag
gcattcttttttggtttttgttttctcaagacagggtctcactatgtagc
cctggcttacctggaactcactatggagatcagggtggcctcaaactcac
agagatctacctgcctctgcctctcatgtgctggaattcaaggcatgtac
cactatgcctggatttcaaaatgttctttcagtcccaatcagggagatac
tttgaaaatgcaaatctttttgaagtggttaggtgaatttccatgagcag
acaacaggagtttgatcctgtgacataaatcgtgggaagatagaacaacc
aattcctgtaagttgccctctgacttcatgctagggcaaatgcacactcc
cttatatgtatgctccagcccaccccaccccctaacactaatatgtaatg
ataaataaagcaggaactggggctggagagatggctcagcagttaagagc
aatgactgctcttccaggggtcctgagttcaatttcaagcaaccacatgg
tggctcacaaccatctgtaatggggtctgatgctctcttctagtgtgtct
gaagacagttacattgtacttatatgcatacaatagatacacctttaaaa
aaataaagcaggaactaaatgaggaaatgcctgagtcaatagactatggt
tcaatctctgggtacaagcaagtttggaggagaagtgaggcagaacagtc
aggcattctgggccatgaaggatctcttagagcatattgaagaatttagg
gtttatttcgtagactgtagggagaccctggaagattttgagccacttta
aactacatttgctttttagaagtatcactatggaaagagttctggctacc
cagtaaacagggtgattggaatgttcattaaccccagagatgggaagaat
tttattataaaatacacttgcagatgacggagagacttaatgtataatgt
cacagtgggaaattgaaggctcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_19766986_19768054
seq2: B6Ng01-226F22.g_66_1139 (reverse)

seq1  CTGAGCCCTC-ATTTCCCACTGTGCCCTTATACATTTAGGTCTCTCC-TC  48
      ||||||| || ||||||||||||| | ||||||| ||| |||||||| ||
seq2  CTGAGCCTTCAATTTCCCACTGTGACATTATACA-TTAAGTCTCTCCGTC  49

seq1  ATCTGCAAGTGTTATTTTATAATAAA--TCTTCCCATCTCT-GGGTTAAT  95
      ||||||||||| ||||||||||||||  ||||||||||||| ||||||||
seq2  ATCTGCAAGTG-TATTTTATAATAAAATTCTTCCCATCTCTGGGGTTAAT  98

seq1  GAACATTCCAATCACCCTGTTTACTGGGT-GCCAG-ACTCTTTCCCATAG  143
      ||||||||||||||||||||||||||||| ||||| ||||||| ||||||
seq2  GAACATTCCAATCACCCTGTTTACTGGGTAGCCAGAACTCTTT-CCATAG  147

seq1  TGATACTTCTAAAAAGCAAATGTAGTTTTAAGTGGCTCAAAATCTTCCAG  193
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TGATACTTCTAAAAAGCAAATGTAGTTTAAAGTGGCTCAAAATCTTCCAG  197

seq1  GGTCTCCCTACAGTCTACG-AATAAACCCTAAATTCTTCAATATGCTCTA  242
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GGTCTCCCTACAGTCTACGAAATAAACCCTAAATTCTTCAATATGCTCTA  247

seq1  AGAGATCCTTCATGGCCCAGAATGCCTGACTGTTCTGCCTCACTTCTCCT  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATCCTTCATGGCCCAGAATGCCTGACTGTTCTGCCTCACTTCTCCT  297

seq1  CCAAACTTGCTTGTACCCAGAGATTGAACCATAGTCTATTGACTCAGGCA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACTTGCTTGTACCCAGAGATTGAACCATAGTCTATTGACTCAGGCA  347

seq1  TTTCCTCATTTAGTTCCTGCTTTATTTTTTTAAAGGTGTATCTATTGTAT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCATTTAGTTCCTGCTTTATTTTTTTAAAGGTGTATCTATTGTAT  397

seq1  GCATATAAGTACAATGTAACTGTCTTCAGACACACTAGAAGAGAGCATCA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATAAGTACAATGTAACTGTCTTCAGACACACTAGAAGAGAGCATCA  447

seq1  GACCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTTGAAATTGAA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTTGAAATTGAA  497

seq1  CTCAGGACCCCTGGAAGAGCAGTCATTGCTCTTAACTGCTGAGCCATCTC  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGACCCCTGGAAGAGCAGTCATTGCTCTTAACTGCTGAGCCATCTC  547

seq1  TCCAGCCCCAGTTCCTGCTTTATTTATCATTACATATTAGTGTTAGGGGG  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCCCCAGTTCCTGCTTTATTTATCATTACATATTAGTGTTAGGGGG  597

seq1  TGGGGTGGGCTGGAGCATACATATAAGGGAGTGTGCATTTGCCCTAGCAT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTGGGCTGGAGCATACATATAAGGGAGTGTGCATTTGCCCTAGCAT  647

seq1  GAAGTCAGAGGGCAACTTACAGGAATTGGTTGTTCTATCTTCCCACGATT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCAGAGGGCAACTTACAGGAATTGGTTGTTCTATCTTCCCACGATT  697

seq1  TATGTCACAGGATCAAACTCCTGTTGTCTGCTCATGGAAATTCACCTAAC  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCACAGGATCAAACTCCTGTTGTCTGCTCATGGAAATTCACCTAAC  747

seq1  CACTTCAAAAAGATTTGCATTTTCAAAGTATCTCCCTGATTGGGACTGAA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCAAAAAGATTTGCATTTTCAAAGTATCTCCCTGATTGGGACTGAA  797

seq1  AGAACATTTTGAAATCCAGGCATAGTGGTACATGCCTTGAATTCCAGCAC  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACATTTTGAAATCCAGGCATAGTGGTACATGCCTTGAATTCCAGCAC  847

seq1  ATGAGAGGCAGAGGCAGGTAGATCTCTGTGAGTTTGAGGCCACCCTGATC  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAGGCAGAGGCAGGTAGATCTCTGTGAGTTTGAGGCCACCCTGATC  897

seq1  TCCATAGTGAGTTCCAGGTAAGCCAGGGCTACATAGTGAGACCCTGTCTT  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATAGTGAGTTCCAGGTAAGCCAGGGCTACATAGTGAGACCCTGTCTT  947

seq1  GAGAAAACAAAAACCAAAAAAGAATGCCTTGAACCCAGATTACCACATGG  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAACAAAAACCAAAAAAGAATGCCTTGAACCCAGATTACCACATGG  997

seq1  TCTTCTGCACTTAACAGAAGCCAACCAACCTTTCATCCACTAGGGCTGAC  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTGCACTTAACAGAAGCCAACCAACCTTTCATCCACTAGGGCTGAC  1047

seq1  TTCCACTTCAGTCTACCTGATGAATTC  1069
      |||||||||||||||||||||||||||
seq2  TTCCACTTCAGTCTACCTGATGAATTC  1074