BAC Information

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BAC

Clone NameB6Ng01-226I04
Chromosome12 (Build37)
Map Location 120,947,653 - 120,948,736
singlet/doubletsinglet
Overlap genenone
Upstream geneEG668615, LOC620665, Sp8, Abcb5, Itgb8, EG627557, LOC100043011, 4732474O15Rik, LOC668632
Downstream geneLOC668633, Gm528, LOC100043017
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-226I04.bB6Ng01-226I04.g
ACCGA040433GA040434
length1,2201,077
definitionB6Ng01-226I04.b B6Ng01-226I04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatttgattcaataagtttaggaaaaaaggtttaagaaatgc
ttttagttgtcttgctagaaatgtaataaagttagaatcaagactcaaat
gtacctactcctcctaatagtaaacaaatgctgcataataagaaataaaa
tgagctttcttaattatactaaaaggagaaatagacttctgccaaatttg
tgttcaaggaaacacatttaggtccaaggatgaagccacaggtgtgcact
atgataaggtaaggccatgagaaaactgttgctttgaacttataatgaga
ttgtcgaatgaaacactgctttgaacttaatatcaacatccttcagtaac
tcccatttaatgtaacattttatctctgatgtaattttctaaagaacttt
ttgtctaagatggtataaaaagatcagagaaaaaaattaagttgctggat
agtttggcttggggagttctgcccacccatccatctatccatccatccat
tcatccacccctctaaatgtatattttgtctgtacagacacatgtagggg
aaagtgtatgtatgtaagcatacacaaatactagtgaaattgattgagat
atttggacccaacgagaatgtgggtgtatgaatctattggtgtctgtgca
tatctgtgcatatttgcctgtataaagcattttttcttttcctttccttc
ctctctagttcacaaatttaactagcctagcctgagaggtctctggctgc
ctggacagagaagggagagatagcaatcactttttctacttaatctgcta
ggcagcagtgttaatcacccaagtaagctgtttttaaccacagaataagc
aagaaagtttttaggatttttttttagaggttatcagtaagcacccaggc
aatagttagagagctagaaggccagaggaacatggcttaaatactgtctg
gagacattctttatttactttctaattgtttaattatttacattccaaat
gttgacccccacttcaagagtttttcatccccccctttgtctttggagag
gggtggctcacccatcccacacctctcaccacttggccatcacctcacct
taccctatctcacattccccttccggggggcatcagtctctacaggatgg
gcaatgcttcccactggccgacagtgtagtcttggctacacgagtgtgtg
cctggaaccaccagagatca
gaattcaggtcctcatgctgtgcagcaagcagttttgttcattgagtcat
cttcctagctctgtattataaatatattctactttctgtttcttacattt
gtttgcttaagttaggcaatgatttaaaatgtttcttgaaaagtcaaatg
tttaacccaaaagtgaaagcaaaacagttttaaaaattgaacaaggtatg
aaatctttgaaaaaaaaaaaactgattgtataagattaatttttgaaaag
agcaaacatccagataaagaattgttatcaacagatttgctttaaagatt
cttcagttcattgtttttgctgttcctaaatatatgaatctcatttccag
aaataagattatatgaggtgacctaccatcccagtaggttttcctacatg
tctgattgaaatgaagacatcaaggtttttgtttttttttaatctgttag
tttttacctttttttttttttgaaacaaaaatacagaggttttatatgta
aacttgttagaacaatactcataaaaatatcgaggcagaggcatgcagaa
ggaagaaaaaacatattgatcagagagtactttcttattttaaaatattt
ttattaggtattttcctcatttacatttccaatgctaacccaaaagtccc
ccaaacacccccccactctcctaaccacccactccaactttttgggcctg
gcattcccctgtacaggggcatataaagtttgcaagtccaatgggcctct
cttttcagtgatggccaactaggccatcttttgatacatatgcagctaga
gtcaagagctccggagtactggttagttcataatgatgttctacctatag
ggttgcagatccatttagctccttgggtatttttctctagctcctccatt
gggggccctgtgatccatccaatagctgactgtgagcatccacttctgtg
tttgctaggccccggcatagtctcataagagacagctatatctgggtcct
tcagcaaaatcttgctagttgtgtgcatgtgtcagcgttgagctgatatg
gatgatccccagaatatgcagtctcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_120947653_120948736
seq2: B6Ng01-226I04.g_65_1141

seq1  GAATTCAGGTCCTCATGCTGTGCAGCAAGCAGTTTTGTTCATTGAGTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTCCTCATGCTGTGCAGCAAGCAGTTTTGTTCATTGAGTCAT  50

seq1  CTTCCTAGCTCTGTATTATAAATATATTCTACTTTCTGTTTCTTACATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTAGCTCTGTATTATAAATATATTCTACTTTCTGTTTCTTACATTT  100

seq1  GTTTGCTTAAGTTAGGCAATGATTTAAAATGTTTCTTGAAAAGTCAAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCTTAAGTTAGGCAATGATTTAAAATGTTTCTTGAAAAGTCAAATG  150

seq1  TTTAACCCAAAAGTGAAAGCAAAACAGTTTTAAAAATTGAACAAGGTATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACCCAAAAGTGAAAGCAAAACAGTTTTAAAAATTGAACAAGGTATG  200

seq1  AAATCTTTGAAAAAAAAAAAACTGATTGTATAAGATTAATTTTTGAAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTTGAAAAAAAAAAAACTGATTGTATAAGATTAATTTTTGAAAAG  250

seq1  AGCAAACATCCAGATAAAGAATTGTTATCAACAGATTTGCTTTAAAGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAACATCCAGATAAAGAATTGTTATCAACAGATTTGCTTTAAAGATT  300

seq1  CTTCAGTTCATTGTTTTTGCTGTTCCTAAATATATGAATCTCATTTCCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGTTCATTGTTTTTGCTGTTCCTAAATATATGAATCTCATTTCCAG  350

seq1  AAATAAGATTATATGAGGTGACCTACCATCCCAGTAGGTTTTCCTACATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGATTATATGAGGTGACCTACCATCCCAGTAGGTTTTCCTACATG  400

seq1  TCTGATTGAAATGAAGACATCAAGGTTTTTGTTTTTTTTTAATCTGTTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATTGAAATGAAGACATCAAGGTTTTTGTTTTTTTTTAATCTGTTAG  450

seq1  TTTTTACCTTTTTTTTTTTTTGAAACAAAAATACAGAGGTTTTATATGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTACCTTTTTTTTTTTTTGAAACAAAAATACAGAGGTTTTATATGTA  500

seq1  AACTTGTTAGAACAATACTCATAAAAATATCGAGGCAGAGGCATGCAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGTTAGAACAATACTCATAAAAATATCGAGGCAGAGGCATGCAGAA  550

seq1  GGAAGAAAAAACATATTGATCAGAGAGTACTTTCTTATTTTAAAATATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAAAAAACATATTGATCAGAGAGTACTTTCTTATTTTAAAATATTT  600

seq1  TTATTAGGTATTTTCCTCATTTACATTTCCAATGCTAACCCAAAAGTCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAGGTATTTTCCTCATTTACATTTCCAATGCTAACCCAAAAGTCCC  650

seq1  CCAAACACCCCCCCACTCTCCTAACCACCCACTCCAACTTTTTGGGCCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACACCCCCCCACTCTCCTAACCACCCACTCCAACTTTTTGGGCCTG  700

seq1  GCATTCCCCTGTACAGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCCCCTGTACAGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCT  750

seq1  CTTTTCAGTGATGGCCAACTAGGCCATCTTTTGATACATATGCAGCTAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCAGTGATGGCCAACTAGGCCATCTTTTGATACATATGCAGCTAGA  800

seq1  GTCAAGAGCTCCGGAGTACTGGTTAGTTCATAATGATGTTCTACCTATAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGAGCTCCGGAGTACTGGTTAGTTCATAATGATGTTCTACCTATAG  850

seq1  GGTTGCAGATCCATTTAGCTCCTTGGGTA-TTTTCTCTAGCTCCTCCATT  899
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GGTTGCAGATCCATTTAGCTCCTTGGGTATTTTTCTCTAGCTCCTCCATT  900

seq1  GGGGGCCCTGTGATCCATCCAATAGCTGACTGTGAGCATCCACTTCTGTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGCCCTGTGATCCATCCAATAGCTGACTGTGAGCATCCACTTCTGTG  950

seq1  TTTGCTAGGCCCCGGCATAGTCTCATAAGAGACAGCTATATCTGGGTCCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTTGCTAGGCCCCGGCATAGTCTCATAAGAGACAGCTATATCTGGGTCC-  999

seq1  TTCAGCAAAATCTTGCTAG-TGTGTGCAATGGTGTCAGCGTTTGGAAGCT  1048
      ||||||||||||||||||| ||||||||   |||||||||||    ||||
seq2  TTCAGCAAAATCTTGCTAGTTGTGTGCA--TGTGTCAGCGTT---GAGCT  1044

seq1  GATTATGGGATGGATCCCCAG-ATATGGCAGTCTCTA  1084
      || ||| |||| ||||||||| |||| ||||||||||
seq2  GA-TAT-GGAT-GATCCCCAGAATAT-GCAGTCTCTA  1077