BAC Information

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BAC

Clone NameB6Ng01-230A01
Chromosome12 (Build37)
Map Location 59,373,355 - 59,374,050
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040044, Foxa1, 4921506M07Rik, EG217600, BC042761, Sstr1, Clec14a
Downstream geneLOC100040183, Sec23a, Sip1, Trappc6b, Pnn, EG544872, Mia2, Mgea6, Fbxo33
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-230A01.bB6Ng01-230A01.g
ACCGA042982GA042983
length6961,191
definitionB6Ng01-230A01.b B6Ng01-230A01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgactgagtatgttggctctgattatactttgcttttttatttt
ggttgttgttgtttaagtttttccattaattatttattcagtttacatcg
caatatctggctccatgtcctcccagttcccccttcccacacatcctctc
ccctattccctcttctgttctcctctaagaatatccatgatccccaaacc
cttgaacttacaacttgaagaatagtaaattgtcaataccccagcctcta
ctgaacacaatgtgttgagtttcagtctttcagagggatctcactgcaat
ggaccctattaactatagctattgtccttatattgactttggattctctt
tcctttttttctacctcacatccaaatggaaacataagttggtaaagaaa
ataaattatgagaaagggatacttatctaaatatgggcattattggcata
gtggtgatatcatacctgtgacatggcattaaatgaggttgcgaggggga
aagaatgtcaagtgaatgagaagaccaaggatcagggttcctgaaaactg
ccacaatgtatggacttgacttttaaaagatccatacgaacattaaacat
ttgtcaccagcccagtgaaaaggatcatagtgctaaagtccagtccaatt
ctaaaggctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgcccgggcccagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atggaggagctagagaaagtagccagagctaaagggatctgcaccctata
gtggacacatatgagctaaccagtacccggagctcttgactcttagctgc
atataatcaaaggattgcctagttcgcatcactgaaagagaggcccaatg
gactgccacctttattggccagtactgggaatccagctaatggggaatgc
tgtcagggagtggctatcgaaccatcgacctccctagtgac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_59373355_59374050
seq2: B6Ng01-230A01.b_45_740 (reverse)

seq1  CACACACACACACACACACACACACACACACACACAGAGCCTTTAGAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACAGAGCCTTTAGAATT  50

seq1  GGACTGGACTTTAGCACTATGATCCTTTTCACTGGGCTGGTGACAAATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGGACTTTAGCACTATGATCCTTTTCACTGGGCTGGTGACAAATGT  100

seq1  TTAATGTTCGTATGGATCTTTTAAAAGTCAAGTCCATACATTGTGGCAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGTTCGTATGGATCTTTTAAAAGTCAAGTCCATACATTGTGGCAGT  150

seq1  TTTCAGGAACCCTGATCCTTGGTCTTCTCATTCACTTGACATTCTTTCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGGAACCCTGATCCTTGGTCTTCTCATTCACTTGACATTCTTTCCC  200

seq1  CCTCGCAACCTCATTTAATGCCATGTCACAGGTATGATATCACCACTATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGCAACCTCATTTAATGCCATGTCACAGGTATGATATCACCACTATG  250

seq1  CCAATAATGCCCATATTTAGATAAGTATCCCTTTCTCATAATTTATTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATAATGCCCATATTTAGATAAGTATCCCTTTCTCATAATTTATTTTC  300

seq1  TTTACCAACTTATGTTTCCATTTGGATGTGAGGTAGAAAAAAAGGAAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCAACTTATGTTTCCATTTGGATGTGAGGTAGAAAAAAAGGAAAGA  350

seq1  GAATCCAAAGTCAATATAAGGACAATAGCTATAGTTAATAGGGTCCATTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCAAAGTCAATATAAGGACAATAGCTATAGTTAATAGGGTCCATTG  400

seq1  CAGTGAGATCCCTCTGAAAGACTGAAACTCAACACATTGTGTTCAGTAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAGATCCCTCTGAAAGACTGAAACTCAACACATTGTGTTCAGTAGA  450

seq1  GGCTGGGGTATTGACAATTTACTATTCTTCAAGTTGTAAGTTCAAGGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGGGTATTGACAATTTACTATTCTTCAAGTTGTAAGTTCAAGGGTT  500

seq1  TGGGGATCATGGATATTCTTAGAGGAGAACAGAAGAGGGAATAGGGGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGATCATGGATATTCTTAGAGGAGAACAGAAGAGGGAATAGGGGAGA  550

seq1  GGATGTGTGGGAAGGGGGAACTGGGAGGACATGGAGCCAGATATTGCGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTGTGGGAAGGGGGAACTGGGAGGACATGGAGCCAGATATTGCGAT  600

seq1  GTAAACTGAATAAATAATTAATGGAAAAACTTAAACAACAACAACCAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACTGAATAAATAATTAATGGAAAAACTTAAACAACAACAACCAAAA  650

seq1  TAAAAAAGCAAAGTATAATCAGAGCCAACATACTCAGTCAGAATTC  696
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAGCAAAGTATAATCAGAGCCAACATACTCAGTCAGAATTC  696