BAC Information

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BAC

Clone NameB6Ng01-232L22
Chromosome12 (Build37)
Map Location 84,944,866 - 85,085,682
singlet/doubletdoublet
Overlap geneLOC626950, Rbm25, Psen1
Upstream geneRgs6, Dpf3, Wdr21, Zfyve1
Downstream genePapln, Numb, LOC100042325, 2410016O06Rik, Acot2, Acot1, Acot4, Acot3, Acot5, LOC666963, Acot6, Dnalc1, Pnma1, C130039O16Rik, EG432676, Zadh1, Zfp410, 9830169C18Rik, Coq6, Entpd5, 2900006K08Rik, Rnf113a2, Aldh6a1, Lin52, Chx10, Abcd4, 7420416P09Rik, Tmem90a
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232L22.bB6Ng01-232L22.g
ACCGA045000GA045001
length353473
definitionB6Ng01-232L22.b B6Ng01-232L22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(84,944,866 - 84,945,218)(85,085,204 - 85,085,682)
sequence
atcttttttttttctttaattatatgtaaatacactgtagctgtcttcag
acactccagaagagggagtcagatctcattatggatggttgtgagccacc
atgtggttgctgggatttgaacttcggacctttggaagagcagtcgggtg
ctcttacccactgagccatctcaccagcccgtgaattcatctttaaatgc
agaatgtgtaaacccagcttaccatgctagagataacaccccaaaagttt
ccagtaagatactactcttatctatgttatccagacctggaattttgtgt
gtgtgtgcgtgtgtgcatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gtg

ttcgtatgtttctctgaaaattgagccttaccacattagccaaatgcaga
attctctgttactgttaacattacagccacacagttcatggtaagctgtt
ctttgtaaacatttccaaagatttgacttttaattctgacaccatttctt
ccttttccagccacctttgggactgtagctttcccgtcctgcaggctcca
tttaatttctttaattctgggttttaagtgctctcgcctctatttaaggc
agcaattacatttctcagcatgagcttttccttttgtgaatccatctccc
agaaggctttttgatttttgctgtgtctcacaaccacggtcagcaggtcg
tgtgcagttcactgccttcttcccctcccccctttcttagggaagttctg
gtctgctgtggtggtctgatgcagacaccattccctttatgtgtggatat
atggtgtgtgtttgtatgatgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_84944866_84945218
seq2: B6Ng01-232L22.b_53_405

seq1  ATCTTTTTTTTTTCTTTAATTATATGTAAATACACTGTAGCTGTCTTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTTTTTTTCTTTAATTATATGTAAATACACTGTAGCTGTCTTCAG  50

seq1  ACACTCCAGAAGAGGGAGTCAGATCTCATTATGGATGGTTGTGAGCCACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCCAGAAGAGGGAGTCAGATCTCATTATGGATGGTTGTGAGCCACC  100

seq1  ATGTGGTTGCTGGGATTTGAACTTCGGACCTTTGGAAGAGCAGTCGGGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGTTGCTGGGATTTGAACTTCGGACCTTTGGAAGAGCAGTCGGGTG  150

seq1  CTCTTACCCACTGAGCCATCTCACCAGCCCGTGAATTCATCTTTAAATGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTACCCACTGAGCCATCTCACCAGCCCGTGAATTCATCTTTAAATGC  200

seq1  AGAATGTGTAAACCCAGCTTACCATGCTAGAGATAACACCCCAAAAGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGTGTAAACCCAGCTTACCATGCTAGAGATAACACCCCAAAAGTTT  250

seq1  CCAGTAAGATACTACTCTTATCTATGTTATCCAGACCTGGAATTTTGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTAAGATACTACTCTTATCTATGTTATCCAGACCTGGAATTTTGTGT  300

seq1  GTGTGTGCGTGTGTGCATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGCGTGTGTGCATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  350

seq1  GTG  353
      |||
seq2  GTG  353


seq1: chr12_85085204_85085682
seq2: B6Ng01-232L22.g_65_543 (reverse)

seq1  CACATCATACAAACACACACCATATATCCACACATAAAGGGAATGGTGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCATACAAACACACACCATATATCCACACATAAAGGGAATGGTGTC  50

seq1  TGCATCAGACCACCACAGCAGACCAGAACTTCCCTAAGAAAGGGGGGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCAGACCACCACAGCAGACCAGAACTTCCCTAAGAAAGGGGGGAGG  100

seq1  GGAAGAAGGCAGTGAACTGCACACGACCTGCTGACCGTGGTTGTGAGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAAGGCAGTGAACTGCACACGACCTGCTGACCGTGGTTGTGAGACA  150

seq1  CAGCAAAAATCAAAAAGCCTTCTGGGAGATGGATTCACAAAAGGAAAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAAAATCAAAAAGCCTTCTGGGAGATGGATTCACAAAAGGAAAAGC  200

seq1  TCATGCTGAGAAATGTAATTGCTGCCTTAAATAGAGGCGAGAGCACTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCTGAGAAATGTAATTGCTGCCTTAAATAGAGGCGAGAGCACTTAA  250

seq1  AACCCAGAATTAAAGAAATTAAATGGAGCCTGCAGGACGGGAAAGCTACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAGAATTAAAGAAATTAAATGGAGCCTGCAGGACGGGAAAGCTACA  300

seq1  GTCCCAAAGGTGGCTGGAAAAGGAAGAAATGGTGTCAGAATTAAAAGTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCAAAGGTGGCTGGAAAAGGAAGAAATGGTGTCAGAATTAAAAGTCA  350

seq1  AATCTTTGGAAATGTTTACAAAGAACAGCTTACCATGAACTGTGTGGCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTGGAAATGTTTACAAAGAACAGCTTACCATGAACTGTGTGGCTG  400

seq1  TAATGTTAACAGTAACAGAGAATTCTGCATTTGGCTAATGTGGTAAGGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTTAACAGTAACAGAGAATTCTGCATTTGGCTAATGTGGTAAGGCT  450

seq1  CAATTTTCAGAGAAACATACGAAGAATTC  479
      |||||||||||||||||||||||||||||
seq2  CAATTTTCAGAGAAACATACGAAGAATTC  479


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