BAC Information

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BAC

Clone NameB6Ng01-233B22
Chromosome12 (Build37)
Map Location 102,155,585 - 102,156,667
singlet/doubletsinglet
Overlap gene0610010D24Rik
Upstream geneTdp1, Kcnk13, Psmc1, BC002230, Calm1, Ttc7b, Rps6ka5, LOC100040123, 9030617O03Rik, EG667148, Gpr68
Downstream geneLOC100040184, Smek1, 4930463M05Rik, Mylf-ps, 4932415G16Rik, Mtac2d1, Fbln5, Trip11
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-233B22.bB6Ng01-233B22.g
ACCGA045270GA045271
length1,2091,082
definitionB6Ng01-233B22.b B6Ng01-233B22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactcggacaaccggattcttctacagcaaagctttattgcttca
tctgaaggaagaccccaaacaaggaaaatggtgctgcttatatacccctc
catgtgacgtgtcagctcctgattagctgctcactcatcaccccactact
acgccccgggatgggcagtgacttggcatgaatttactcttgcacctgca
cacattacttgtttaccaattaggcacagcggaggctcatgatggcgatt
gctcatggctctccacatctccccctttttattttattaaaacgcaagcc
actctttaatagatgaagatagaggtcgaatccctagtgtacagaaatag
gggccatgtacaggattggctcttaggctcacaggcttttacccagagca
accctgacctgctcccgtgccgtttatttttttaggggagggacatttgg
acactcaaccctaatgcaaatcgacttgtcttctaggagtgcccaaacct
ctgagcgactcctatgtggtgcttagcccaacaatccataagagtcaacg
acctactcactcgtccctgtgcaatgagtctagcttctaggggtgcaaga
gctgagtatggcctagggcgagctttaattgttgagtctctctcattttt
cgcagaaccgaggagcgcaagagcagagaactcagatgccaattaagtct
taagcatggatagccaaatttcaggggaggccacttgttcaatggctgca
agtgcttgagcaataacgaccttgtcacggttttgttgggttctgagctt
gcagaccaaccagagcatgaacacaagcccacagcagatggcagcagcaa
acaaaattacccccacccactccttaaaataataaaaggcagaggtaagc
caagaggtaaaattgccaacaatgatgaattctattcgagttccattaag
gcttaaaatctggcattagatgtaaagaattgaggaaacacccgaattcg
tcacagcatggtttcagaaccacagagcctcttcagtttcactagtggga
gcactcagccacagaacatccacgtcctcacagccttcactgcctgaaat
tgctctgttcaagcttgctctggacctgcaccggtgtcaaatgtatcctg
agaccaaacaggatctctctctctcctaatcaatgtgaagagagagcact
ctgtttatc
gaattcatgccaagccgacacttaatcaactgagctacatccctagtctt
atttatctactcttaaacaaaaacaaaacaaaacaaaacaaaaaaagtgc
accacctgggactaacaacagttttgtgtcacaaaagtatgtgtgtactg
aggtacaaggtttacagcgggacagcagcgacacggagcaccttatggct
ccatcatcgtgcgtgccatccttgcacaggagccatgcctagctcttctg
cattgtacaggtgccactgaagcaggccgtgataattaaatcaccaaccc
tggcacgctcactagctgtcactcagtcacatgatataagttcacttagc
acccactacatgcagggggcgatcatatagaaggctagaacaaacatctt
gattaatttagtctcaagcaatacggtcacttgacagcatgtgttctctt
caaatgcagggagagctggcaagggggactaaacgtgtaaacagaccaca
gaaataaaacccttaaaatttaaaacgtctgttaatcaaatcgggtctgg
ggacatacttcagttggcagagtgcttggttaacgtgcgagtcctgggtc
agagtcccagcagcactcagactggcctggtgacaacctggtctcggcta
taaagtcagctgaggattagcctgggatacaaaactcctcttcaaaagaa
aaacagatttgctcgtgatttcaagtgggaagcaacatcggtccctgtcc
ctattctacatagctcggatccagaggatctgtgacccacatcctcgggg
caggcagggaaaaagaggaatctgagccctaacttgtttccaaactcctt
ggtctgtgctggaaaccttggtgtgtggcccatggctgcaccagagagtt
tctcatgccctgttacgaagcctctgagctgtagatgggaggagccttct
taccctttaagctcaaagcgagctgttgctgatgcgttcctactgctctt
ccaagcttgtttggccgcgatgctgagggagaaacggctacattaataca
gagagcccatgaccaggtagattcccggattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_102155585_102156667
seq2: B6Ng01-233B22.g_68_1149

seq1  GAATTCATGCCAAGCCGACACTTAATCAACTGAGCTACATCCCTAGTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGCCAAGCCGACACTTAATCAACTGAGCTACATCCCTAGTCTT  50

seq1  ATTTATCTACTCTTAAACAAAAACAAAACAAAACAAAACAAAAAAAGTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATCTACTCTTAAACAAAAACAAAACAAAACAAAACAAAAAAAGTGC  100

seq1  ACCACCTGGGACTAACAACAGTTTTGTGTCACAAAAGTATGTGTGTACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCTGGGACTAACAACAGTTTTGTGTCACAAAAGTATGTGTGTACTG  150

seq1  AGGTACAAGGTTTACAGCGGGACAGCAGCGACACGGAGCACCTTATGGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACAAGGTTTACAGCGGGACAGCAGCGACACGGAGCACCTTATGGCT  200

seq1  CCATCATCGTGCGTGCCATCCTTGCACAGGAGCCATGCCTAGCTCTTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCATCGTGCGTGCCATCCTTGCACAGGAGCCATGCCTAGCTCTTCTG  250

seq1  CATTGTACAGGTGCCACTGAAGCAGGCCGTGATAATTAAATCACCAACCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTACAGGTGCCACTGAAGCAGGCCGTGATAATTAAATCACCAACCC  300

seq1  TGGCACGCTCACTAGCTGTCACTCAGTCACATGATATAAGTTCACTTAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACGCTCACTAGCTGTCACTCAGTCACATGATATAAGTTCACTTAGC  350

seq1  ACCCACTACATGCAGGGGGCGATCATATAGAAGGCTAGAACAAACATCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACTACATGCAGGGGGCGATCATATAGAAGGCTAGAACAAACATCTT  400

seq1  GATTAATTTAGTCTCAAGCAATACGGTCACTTGACAGCATGTGTTCTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAATTTAGTCTCAAGCAATACGGTCACTTGACAGCATGTGTTCTCTT  450

seq1  CAAATGCAGGGAGAGCTGGCAAGGGGGACTAAACGTGTAAACAGACCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGCAGGGAGAGCTGGCAAGGGGGACTAAACGTGTAAACAGACCACA  500

seq1  GAAATAAAACCCTTAAAATTTAAAACGTCTGTTAATCAAATCGGGTCTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAAAACCCTTAAAATTTAAAACGTCTGTTAATCAAATCGGGTCTGG  550

seq1  GGACATACTTCAGTTGGCAGAGTGCTTGGTTAACGTGCGAGTCCTGGGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATACTTCAGTTGGCAGAGTGCTTGGTTAACGTGCGAGTCCTGGGTC  600

seq1  AGAGTCCCAGCAGCACTCAGACTGGCCTGGTGACAACCTGGTCTCGGCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCCCAGCAGCACTCAGACTGGCCTGGTGACAACCTGGTCTCGGCTA  650

seq1  TAAAGTCAGCTGAGGATTAGCCTGGGATACAAAACTCCTCTTCAAAAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTCAGCTGAGGATTAGCCTGGGATACAAAACTCCTCTTCAAAAGAA  700

seq1  AAACAGATTTGCTCGTGATTTCAAGTGGGAAGCAACATCGGTCCCTGTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGATTTGCTCGTGATTTCAAGTGGGAAGCAACATCGGTCCCTGTCC  750

seq1  CTATTCTACATAGCTCGGATCCAGAGGATCTGTGACCCACATCCTCGGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCTACATAGCTCGGATCCAGAGGATCTGTGACCCACATCCTCGGGG  800

seq1  CAGGCAGGGAAAAAGAGGAATCTGAGCCCTAACTTG-TTCCAAACTCCTT  849
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CAGGCAGGGAAAAAGAGGAATCTGAGCCCTAACTTGTTTCCAAACTCCTT  850

seq1  GGTCTGTGCTGGAAACCTTGGTGTGTGGCCCATGGCTGCACCAGAGAGTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGTGCTGGAAACCTTGGTGTGTGGCCCATGGCTGCACCAGAGAGTT  900

seq1  TCTCATGCCCTGTTACGAAGCCTCTGAGCTGTAAGAATGGGAGGAGCCTT  949
      |||||||||||||||||||||||||||||||||   ||||||||||||||
seq2  TCTCATGCCCTGTTACGAAGCCTCTGAGCTGTA--GATGGGAGGAGCCTT  948

seq1  CTTACCCTTTAGGCTCAAAGGCGAGCTGTTGCTGGATGCGTTCCTACTGC  999
      ||||||||||| ||||||| ||||||||||||| ||||||||||||||||
seq2  CTTACCCTTTAAGCTCAAA-GCGAGCTGTTGCT-GATGCGTTCCTACTGC  996

seq1  TC-TCCAAGC-TGTTTGGCCGCGATGCTGAGGGAGAAACGGCTACATTTA  1047
      || ||||||| ||||||||||||||||||||||||||||||||||| |||
seq2  TCTTCCAAGCTTGTTTGGCCGCGATGCTGAGGGAGAAACGGCTACA-TTA  1045

seq1  ATACAGAGAGCCAATGACCAGGTAGA-TCCCGGATTC  1083
      |||||||||||| ||||||||||||| ||||||||||
seq2  ATACAGAGAGCCCATGACCAGGTAGATTCCCGGATTC  1082