BAC Information

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BAC

Clone NameB6Ng01-237I15
Chromosome12 (Build37)
Map Location 16,250,051 - 16,250,995
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC217409, Trib2, LOC100043268, EG432636, LOC100043273
Downstream geneLpin1, Ntsr2, Greb1, E2f6, Rock2, Pqlc3, 2410004P03Rik, EG668514, Kcnf1, LOC100043299
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-237I15.bB6Ng01-237I15.g
ACCGA048469GA048470
length1,227951
definitionB6Ng01-237I15.b B6Ng01-237I15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacataataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaccagagaactcctaaacc
tgataaacagctttagtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctctacacaaagaataaacaggctgagaaagaaattag
ggaaacaacaccgttctcaatagtcacaaataatataaaatatctcggcg
tgactctaactaaggaagtaaaagatctgtatgataaaaacttcaagtct
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactgaattcttc
aacgaattagaaggagcaatttgcaaattcatctggaataacaaaaaacc
taggatagcaaaaactcttctcaaggataaaagaacctctggtggaatca
ccatgcctgacctaaagctttactacagggcaattgtgataaaaactgca
tggtactggtatagagacatacaagtagaccaatggaatagaattgaaga
cccagaaatgaacccacacacctatggtcacttgatcttcgacaagggag
ctaaaaccatccagtggaagaaagacagcattttcaacaattggtgctgg
cacaactggttgttatcctgtagaagaatgcgaatcgatccatacttatc
tccttgtactaaggtcaaatctagtggatcaggaacttcacataaaacca
gagacactgaacttatagagagaaagtggggaaaagctttgagattattg
ggtacaggaagaatcctgaacagaacagcaattgcttgctctgtagaatc
agaaattgacaatgggactaatggacctccaagatttctgtcaagcacag
gacacacgcttcccaatagtgaccgca
gaattcttgattgtattggaaattttaatataactagcaaggaaaatagt
taggtctaaatatcaggcatgtcacagaagttcatggcaatatcttaagg
tttttcaaagcaaagtaccttgttaggtataactgggttagtgcaattta
tttgtgattttaaagcaatgtttctatacatgtgtctctaataaagtaaa
caaaatgaccaagtcttgctgtttgtctctaaagacatatcagaaaattt
ccaagctattacttcactgctgtcctcctgtccccagcagatgagtgatc
cccagttggctgctattattcatcctttcctattttgatccatttcattc
aaggcagtggtagccaactatgtgagctgcaaggcacttttctgatggac
aggagatagtgaaactgaaataccactgctttatgatgatttggtacagt
tagaatgactatttccagtaaagacacccaaatacaacacaaataacaat
agagggatatgcatggtagatggttggggtaggtgatccatgaaagtgaa
ttaaaggtcagcactaaaatcaaacctgatgaactagaccattatataca
ttatatataagccattataccatttgtatgtttcctgcccatcactcttc
catgaacacaagtaaacaagattgatagatttgagcgttcatcagccatg
ggcccccatggtccttcagtcccttttgttatcagtttcctatgtgctct
acacagcctgttcacttgctattgctctgtctgttcttccaaattctcct
ttccactataaggtatgaatgttggcctttgtgtttggatcttgtaaaac
taaaaggaatgagaggggttggtgcccttatgctatacgacatgtcatct
tgacaaagcagattaatgtaaaaacggtttttgtctgttgtttttattta
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_16250051_16250995
seq2: B6Ng01-237I15.g_67_1015

seq1  GAATTCTTGATTGTATTGGAAATTTTAATATAACTAGCAAGGAAAATAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGATTGTATTGGAAATTTTAATATAACTAGCAAGGAAAATAGT  50

seq1  TAGGTCTAAATATCAGGCATGTCACAGAAGTTCATGGCAATATCTTAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTCTAAATATCAGGCATGTCACAGAAGTTCATGGCAATATCTTAAGG  100

seq1  TTTTTCAAAGCAAAGTACCTTGTTAGGTATAACTGGGTTAGTGCAATTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCAAAGCAAAGTACCTTGTTAGGTATAACTGGGTTAGTGCAATTTA  150

seq1  TTTGTGATTTTAAAGCAATGTTTCTATACATGTGTCTCTAATAAAGTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGATTTTAAAGCAATGTTTCTATACATGTGTCTCTAATAAAGTAAA  200

seq1  CAAAATGACCAAGTCTTGCTGTTTGTCTCTAAAGACATATCAGAAAATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATGACCAAGTCTTGCTGTTTGTCTCTAAAGACATATCAGAAAATTT  250

seq1  CCAAGCTATTACTTCACTGCTGTCCTCCTGTCCCCAGCAGATGAGTGATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCTATTACTTCACTGCTGTCCTCCTGTCCCCAGCAGATGAGTGATC  300

seq1  CCCAGTTGGCTGCTATTATTCATCCTTTCCTATTTTGATCCATTTCATTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTTGGCTGCTATTATTCATCCTTTCCTATTTTGATCCATTTCATTC  350

seq1  AAGGCAGTGGTAGCCAACTATGTGAGCTGCAAGGCACTTTTCTGATGGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGTGGTAGCCAACTATGTGAGCTGCAAGGCACTTTTCTGATGGAC  400

seq1  AGGAGATAGTGAAACTGAAATACCACTGCTTTATGATGATTTGGTACAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGATAGTGAAACTGAAATACCACTGCTTTATGATGATTTGGTACAGT  450

seq1  TAGAATGACTATTTCCAGTAAAGACACCCAAATACAACACAAATAACAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATGACTATTTCCAGTAAAGACACCCAAATACAACACAAATAACAAT  500

seq1  AGAGGGATATGCATGGTAGATGGTTGGGGTAGGTGATCCATGAAAGTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGATATGCATGGTAGATGGTTGGGGTAGGTGATCCATGAAAGTGAA  550

seq1  TTAAAGGTCAGCACTAAAATCAAACCTGATGAACTAGACCATTATATACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGGTCAGCACTAAAATCAAACCTGATGAACTAGACCATTATATACA  600

seq1  TTATATATAAGCCATTATACCATTTGTATGTTTCCTGCCCATCACTCTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATATAAGCCATTATACCATTTGTATGTTTCCTGCCCATCACTCTTC  650

seq1  CATGAACACAAGTAAACAAGATTGATAGATTTGAGCGTTCATCAGCCATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAACACAAGTAAACAAGATTGATAGATTTGAGCGTTCATCAGCCATG  700

seq1  GGCCCCCATGGTCCTTCAGTCCCTTTTGTTATCAG-TTCCTATGTGCTCT  749
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GGCCCCCATGGTCCTTCAGTCCCTTTTGTTATCAGTTTCCTATGTGCTCT  750

seq1  ACACAGCCTGTTCACTTGCTATTGCTCTGTCTGTTCTTCCAAATTCTCC-  798
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ACACAGCCTGTTCACTTGCTATTGCTCTGTCTGTTCTTCCAAATTCTCCT  800

seq1  TTCCACTATAAGGTATGAATGTTGGCCTTTGTGTTTGGATCTTGTATAAC  848
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TTCCACTATAAGGTATGAATGTTGGCCTTTGTGTTTGGATCTTGTAAAAC  850

seq1  T-AAAGGAATGAGAAGGGTTGGTGCCCTT-TGCTATAGGAAATGTCATC-  895
      | |||||||||||| |||||||||||||| ||||||| || |||||||| 
seq2  TAAAAGGAATGAGAGGGGTTGGTGCCCTTATGCTATACGACATGTCATCT  900

seq1  TGACAAAAGCAAATTAATGGAAAAAGGTTTTTTGTTTGTTTGTTTTATTT  945
      |||| |||||| ||||||| ||||| | ||||||| ||||  ||||||||
seq2  TGAC-AAAGCAGATTAATGTAAAAACGGTTTTTGTCTGTTGTTTTTATTT  949